RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 ROCK2O75116 1388 aaKnown RBP10.8□□□□□ -0.68
HMG20A-207ENST00000559035 HSPA6P17066 643 aa10.8□□□□□ -0.68
HMG20A-207ENST00000559035 TFCP2L1Q9NZI6 479 aa10.8□□□□□ -0.68
HMG20A-207ENST00000559035 KAT6BQ8WYB5 2073 aa10.8□□□□□ -0.68
HMG20A-207ENST00000559035 A0A1W2PP64 1363 aa10.79□□□□□ -0.68
HMG20A-207ENST00000559035 KIAA1551Q9HCM1 1747 aa10.79□□□□□ -0.68
HMG20A-207ENST00000559035 COL23A1Q86Y22 540 aaPredicted RBP10.79□□□□□ -0.68
HMG20A-207ENST00000559035 L3MBTL2Q969R5 705 aa10.79□□□□□ -0.68
HMG20A-207ENST00000559035 UBR3Q6ZT12 1888 aa10.78□□□□□ -0.68
HMG20A-207ENST00000559035 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
HMG20A-207ENST00000559035 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
HMG20A-207ENST00000559035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.78□□□□□ -0.68
HMG20A-207ENST00000559035 IP6K1Q92551 441 aa10.78□□□□□ -0.68
HMG20A-207ENST00000559035 CCNL1Q9UK58 526 aaPredicted RBP10.77□□□□□ -0.69
HMG20A-207ENST00000559035 CD2APQ9Y5K6 639 aa10.77□□□□□ -0.69
HMG20A-207ENST00000559035 RTL1A6NKG5 1358 aa10.77□□□□□ -0.69
HMG20A-207ENST00000559035 PCNTO95613 3336 aa10.76□□□□□ -0.69
HMG20A-207ENST00000559035 DDX54Q8TDD1 881 aaKnown RBP10.76□□□□□ -0.69
HMG20A-207ENST00000559035 GPBP1L1Q9HC44 474 aaPredicted RBP10.76□□□□□ -0.69
HMG20A-207ENST00000559035 MAP2P11137 1827 aaKnown RBP10.76□□□□□ -0.69
HMG20A-207ENST00000559035 PKD1L3Q7Z443 1732 aa10.75□□□□□ -0.69
HMG20A-207ENST00000559035 KIF13BQ9NQT8 1826 aa10.75□□□□□ -0.69
HMG20A-207ENST00000559035 KIF3CO14782 793 aa10.75□□□□□ -0.69
HMG20A-207ENST00000559035 MSL1Q68DK7 614 aa10.75□□□□□ -0.69
HMG20A-207ENST00000559035 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
HMG20A-207ENST00000559035 USP47Q96K76 1375 aa10.75□□□□□ -0.69
HMG20A-207ENST00000559035 HOXC9P31274 260 aa10.74□□□□□ -0.69
HMG20A-207ENST00000559035 AMIGO3Q86WK7 504 aa10.74□□□□□ -0.69
HMG20A-207ENST00000559035 SYTL4Q96C24 671 aaPredicted RBP10.74□□□□□ -0.69
HMG20A-207ENST00000559035 ITGB4P16144 1822 aa10.73□□□□□ -0.69
HMG20A-207ENST00000559035 PALLDQ8WX93 1383 aa10.73□□□□□ -0.69
HMG20A-207ENST00000559035 NCAPD2Q15021 1401 aa10.73□□□□□ -0.69
HMG20A-207ENST00000559035 HDGFL2Q7Z4V5 671 aaPredicted RBP10.72□□□□□ -0.69
HMG20A-207ENST00000559035 ZCRB1Q8TBF4 217 aaKnown RBP10.72□□□□□ -0.69
HMG20A-207ENST00000559035 SLC12A5Q9H2X9 1139 aa10.72□□□□□ -0.69
HMG20A-207ENST00000559035 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
HMG20A-207ENST00000559035 PXDNLA1KZ92 1463 aa10.72□□□□□ -0.69
HMG20A-207ENST00000559035 WDR90Q96KV7 1748 aa10.72□□□□□ -0.69
HMG20A-207ENST00000559035 CGNL1Q0VF96 1302 aa10.71□□□□□ -0.69
HMG20A-207ENST00000559035 ZNF526Q8TF50 670 aaPredicted RBP10.71□□□□□ -0.69
HMG20A-207ENST00000559035 PUS7Q96PZ0 661 aaKnown RBP10.71□□□□□ -0.69
HMG20A-207ENST00000559035 BRCA1P38398 1863 aaKnown RBP10.7□□□□□ -0.7
HMG20A-207ENST00000559035 ANKRD26Q9UPS8 1709 aa10.7□□□□□ -0.7
HMG20A-207ENST00000559035 NSD3Q9BZ95 1437 aa10.7□□□□□ -0.7
HMG20A-207ENST00000559035 FLAD1Q8NFF5 587 aa10.7□□□□□ -0.7
HMG20A-207ENST00000559035 LTV1Q96GA3 475 aaPredicted RBP10.7□□□□□ -0.7
HMG20A-207ENST00000559035 C10orf71Q711Q0 1435 aa10.69□□□□□ -0.7
HMG20A-207ENST00000559035 MSH5O43196 834 aa10.69□□□□□ -0.7
HMG20A-207ENST00000559035 NBPF6Q5VWK0 638 aa10.69□□□□□ -0.7
HMG20A-207ENST00000559035 DNAJC5GQ8N7S2 189 aa10.69□□□□□ -0.7
HMG20A-207ENST00000559035 NBPF4Q96M43 638 aa10.69□□□□□ -0.7
HMG20A-207ENST00000559035 TERF2IPQ9NYB0 399 aa10.69□□□□□ -0.7
HMG20A-207ENST00000559035 PCDH11XQ9BZA7 1347 aa10.68□□□□□ -0.7
HMG20A-207ENST00000559035 PCDH11YQ9BZA8 1340 aa10.68□□□□□ -0.7
HMG20A-207ENST00000559035 TMC1Q8TDI8 760 aa10.68□□□□□ -0.7
HMG20A-207ENST00000559035 ZNF831Q5JPB2 1677 aa10.67□□□□□ -0.7
HMG20A-207ENST00000559035 CYP27B1O15528 508 aa10.67□□□□□ -0.7
HMG20A-207ENST00000559035 FBLN1P23142 703 aa10.67□□□□□ -0.7
HMG20A-207ENST00000559035 APLP1P51693 650 aa10.67□□□□□ -0.7
HMG20A-207ENST00000559035 SIN3AQ96ST3 1273 aa10.67□□□□□ -0.7
HMG20A-207ENST00000559035 KIF20BQ96Q89 1820 aa10.67□□□□□ -0.7
HMG20A-207ENST00000559035 SMG6Q86US8 1419 aaKnown RBP10.67□□□□□ -0.7
HMG20A-207ENST00000559035 INSRP06213 1382 aa10.66□□□□□ -0.7
HMG20A-207ENST00000559035 KIF24Q5T7B8 1368 aa10.66□□□□□ -0.7
HMG20A-207ENST00000559035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
HMG20A-207ENST00000559035 SSFA2P28290 1259 aa10.66□□□□□ -0.7
HMG20A-207ENST00000559035 USHBP1Q8N6Y0 703 aa10.66□□□□□ -0.7
HMG20A-207ENST00000559035 COG3Q96JB2 828 aa10.66□□□□□ -0.7
HMG20A-207ENST00000559035 TESK2Q96S53 571 aa10.66□□□□□ -0.7
HMG20A-207ENST00000559035 N4BP2Q86UW6 1770 aaPredicted RBP10.66□□□□□ -0.7
HMG20A-207ENST00000559035 KDRP35968 1356 aa10.65□□□□□ -0.7
HMG20A-207ENST00000559035 C4AP0C0L4 1744 aa10.65□□□□□ -0.7
HMG20A-207ENST00000559035 COL5A3P25940 1745 aaPredicted RBP10.65□□□□□ -0.7
HMG20A-207ENST00000559035 AMPHP49418 695 aa10.65□□□□□ -0.7
HMG20A-207ENST00000559035 SMIM5Q71RC9 77 aa10.65□□□□□ -0.7
HMG20A-207ENST00000559035 AK7Q96M32 723 aa10.65□□□□□ -0.7
HMG20A-207ENST00000559035 CARD11Q9BXL7 1154 aa10.65□□□□□ -0.7
HMG20A-207ENST00000559035 ARFGEF1Q9Y6D6 1849 aa10.65□□□□□ -0.71
HMG20A-207ENST00000559035 FLT4P35916 1363 aa10.65□□□□□ -0.71
HMG20A-207ENST00000559035 TOMM70O94826 608 aa10.64□□□□□ -0.71
HMG20A-207ENST00000559035 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
HMG20A-207ENST00000559035 RRS1Q15050 365 aaKnown RBP10.64□□□□□ -0.71
HMG20A-207ENST00000559035 LINC00116Q8NCU8 138 aa10.64□□□□□ -0.71
HMG20A-207ENST00000559035 RAPGEF4Q8WZA2 1011 aa10.64□□□□□ -0.71
HMG20A-207ENST00000559035 WWC3Q9ULE0 1092 aa10.64□□□□□ -0.71
HMG20A-207ENST00000559035 PHF14O94880 888 aa10.63□□□□□ -0.71
HMG20A-207ENST00000559035 TATP17735 454 aaPredicted RBP10.63□□□□□ -0.71
HMG20A-207ENST00000559035 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
HMG20A-207ENST00000559035 JMYQ8N9B5 988 aa10.63□□□□□ -0.71
HMG20A-207ENST00000559035 PIGBQ92521 554 aa10.63□□□□□ -0.71
HMG20A-207ENST00000559035 SMARCC1Q92922 1105 aaPredicted RBP10.63□□□□□ -0.71
HMG20A-207ENST00000559035 TNRC6CQ9HCJ0 1690 aaKnown RBP10.63□□□□□ -0.71
HMG20A-207ENST00000559035 MPRIPQ6WCQ1 1025 aa10.62□□□□□ -0.71
HMG20A-207ENST00000559035 NMRK2Q9NPI5 230 aa10.62□□□□□ -0.71
HMG20A-207ENST00000559035 PLEKHG2Q9H7P9 1386 aa10.62□□□□□ -0.71
HMG20A-207ENST00000559035 LOC102724428A0A0B4J2F2 783 aa10.61□□□□□ -0.71
HMG20A-207ENST00000559035 FYB1O15117 783 aa10.61□□□□□ -0.71
HMG20A-207ENST00000559035 SIK1P57059 783 aa10.61□□□□□ -0.71
HMG20A-207ENST00000559035 ITPK1Q13572 414 aa10.61□□□□□ -0.71
HMG20A-207ENST00000559035 HSP90AB2PQ58FF8 381 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms