RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 AFF2P51816 1311 aa23.78■■□□□ 1.4
CLPX-203ENST00000558958 SPATA31A5Q5VU36 1347 aa23.78■■□□□ 1.4
CLPX-203ENST00000558958 SPATA31A7Q8IWB4 1347 aa23.78■■□□□ 1.4
CLPX-203ENST00000558958 VPS72Q15906 364 aa23.78■■□□□ 1.4
CLPX-203ENST00000558958 PLEKHO1Q53GL0 409 aaPredicted RBP23.78■■□□□ 1.4
CLPX-203ENST00000558958 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.77■■□□□ 1.4
CLPX-203ENST00000558958 ZNF521Q96K83 1311 aa23.77■■□□□ 1.4
CLPX-203ENST00000558958 IL2RBP14784 551 aa23.77■■□□□ 1.4
CLPX-203ENST00000558958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.77■■□□□ 1.42e-7■■■□□ 16.2
CLPX-203ENST00000558958 TRIM35Q9UPQ4 493 aa23.77■■□□□ 1.4
CLPX-203ENST00000558958 WWC1Q8IX03 1113 aa23.76■■□□□ 1.39
CLPX-203ENST00000558958 THRAP3Q9Y2W1 955 aaKnown RBP23.76■■□□□ 1.39
CLPX-203ENST00000558958 OVOS2A0A0G2JMS6 1433 aa23.76■■□□□ 1.39
CLPX-203ENST00000558958 CCDC9Q9Y3X0 531 aaKnown RBP23.74■■□□□ 1.39
CLPX-203ENST00000558958 DISP2A7MBM2 1401 aa23.74■■□□□ 1.39
CLPX-203ENST00000558958 PARP4Q9UKK3 1724 aaKnown RBP23.73■■□□□ 1.39
CLPX-203ENST00000558958 LMOD3Q0VAK6 560 aa23.73■■□□□ 1.39
CLPX-203ENST00000558958 SPG7Q9UQ90 795 aa23.73■■□□□ 1.39
CLPX-203ENST00000558958 DLG5Q8TDM6 1919 aa23.72■■□□□ 1.39
CLPX-203ENST00000558958 ZNF530Q6P9A1 599 aaPredicted RBP23.72■■□□□ 1.39
CLPX-203ENST00000558958 BARGINQ6ZT62 677 aa23.71■■□□□ 1.39
CLPX-203ENST00000558958 PKD1L3Q7Z443 1732 aa23.71■■□□□ 1.39
CLPX-203ENST00000558958 GNAT3A8MTJ3 354 aa23.7■■□□□ 1.38
CLPX-203ENST00000558958 WDR63Q8IWG1 891 aa23.7■■□□□ 1.38
CLPX-203ENST00000558958 CDCA7Q9BWT1 371 aaPredicted RBP23.7■■□□□ 1.38
CLPX-203ENST00000558958 MAP3K5Q99683 1374 aa23.7■■□□□ 1.38
CLPX-203ENST00000558958 ATRNO75882 1429 aa23.7■■□□□ 1.38
CLPX-203ENST00000558958 HTATSF1O43719 755 aaKnown RBP23.69■■□□□ 1.38
CLPX-203ENST00000558958 PDE3BQ13370 1112 aa23.69■■□□□ 1.38
CLPX-203ENST00000558958 AKAP4Q5JQC9 854 aa23.69■■□□□ 1.38
CLPX-203ENST00000558958 ZCRB1Q8TBF4 217 aaKnown RBP23.69■■□□□ 1.38
CLPX-203ENST00000558958 TRPC5Q9UL62 973 aaPredicted RBP23.69■■□□□ 1.38
CLPX-203ENST00000558958 WNK3Q9BYP7 1800 aa23.68■■□□□ 1.38
CLPX-203ENST00000558958 GOLGA2Q08379 1002 aa23.68■■□□□ 1.38
CLPX-203ENST00000558958 C1orf141Q5JVX7 400 aa23.68■■□□□ 1.38
CLPX-203ENST00000558958 RTF1Q92541 710 aaKnown RBP23.67■■□□□ 1.38
CLPX-203ENST00000558958 CYP27B1O15528 508 aa23.66■■□□□ 1.38
CLPX-203ENST00000558958 PHKG2P15735 406 aa23.66■■□□□ 1.38
CLPX-203ENST00000558958 DCTN1Q14203 1278 aa23.66■■□□□ 1.38
CLPX-203ENST00000558958 CDCA7LQ96GN5 454 aa23.66■■□□□ 1.38
CLPX-203ENST00000558958 GJD4Q96KN9 370 aaPredicted RBP23.66■■□□□ 1.38
CLPX-203ENST00000558958 THUMPD2Q9BTF0 503 aaKnown RBP23.66■■□□□ 1.38
CLPX-203ENST00000558958 PCDH11XQ9BZA7 1347 aa23.66■■□□□ 1.38
CLPX-203ENST00000558958 PCDH11YQ9BZA8 1340 aa23.66■■□□□ 1.38
CLPX-203ENST00000558958 MCM10Q7L590 875 aa23.65■■□□□ 1.38
CLPX-203ENST00000558958 IFNL2Q8IZJ0 200 aa23.65■■□□□ 1.38
CLPX-203ENST00000558958 QTRT2Q9H974 415 aaKnown RBP23.65■■□□□ 1.38
CLPX-203ENST00000558958 IL17REQ8NFR9 667 aa23.64■■□□□ 1.38
CLPX-203ENST00000558958 IL16Q14005 1332 aa23.64■■□□□ 1.37
CLPX-203ENST00000558958 CALD1Q05682 793 aaKnown RBP23.63■■□□□ 1.37
CLPX-203ENST00000558958 FAM98CQ17RN3 349 aaKnown RBP23.63■■□□□ 1.37
CLPX-203ENST00000558958 SPINK5Q9NQ38 1064 aaPredicted RBP23.63■■□□□ 1.37
CLPX-203ENST00000558958 GLI3P10071 1580 aa23.63■■□□□ 1.37
CLPX-203ENST00000558958 EXOC5O00471 708 aa23.62■■□□□ 1.37
CLPX-203ENST00000558958 SLFN5Q08AF3 891 aa23.62■■□□□ 1.37
CLPX-203ENST00000558958 ZNF772Q68DY9 489 aaPredicted RBP23.62■■□□□ 1.37
CLPX-203ENST00000558958 SHANK3Q9BYB0 1731 aa23.62■■□□□ 1.37
CLPX-203ENST00000558958 E9PSI1 815 aa23.62■■□□□ 1.37
CLPX-203ENST00000558958 CEMIPQ8WUJ3 1361 aa23.61■■□□□ 1.37
CLPX-203ENST00000558958 TNS2Q63HR2 1409 aa23.61■■□□□ 1.37
CLPX-203ENST00000558958 CENPBP07199 599 aaPredicted RBP23.61■■□□□ 1.37
CLPX-203ENST00000558958 MPRIPQ6WCQ1 1025 aa23.61■■□□□ 1.37
CLPX-203ENST00000558958 LGR6Q9HBX8 967 aa23.61■■□□□ 1.37
CLPX-203ENST00000558958 HSP90AB1P08238 724 aaKnown RBP23.6■■□□□ 1.37
CLPX-203ENST00000558958 DDB1Q16531 1140 aa23.6■■□□□ 1.37
CLPX-203ENST00000558958 TRMT2AQ8IZ69 625 aaKnown RBP23.6■■□□□ 1.37
CLPX-203ENST00000558958 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
CLPX-203ENST00000558958 RNMTO43148 476 aaKnown RBP23.59■■□□□ 1.37
CLPX-203ENST00000558958 NKX1-1Q15270 411 aaPredicted RBP23.59■■□□□ 1.37
CLPX-203ENST00000558958 ILDR1Q86SU0 546 aaPredicted RBP23.59■■□□□ 1.37
CLPX-203ENST00000558958 ADAMTS7Q9UKP4 1686 aa23.58■■□□□ 1.37
CLPX-203ENST00000558958 KDM6AO15550 1401 aaPredicted RBP23.58■■□□□ 1.37
CLPX-203ENST00000558958 ONECUT3O60422 494 aaPredicted RBP23.58■■□□□ 1.37
CLPX-203ENST00000558958 DCAF5Q96JK2 942 aa23.58■■□□□ 1.37
CLPX-203ENST00000558958 LRRC37A3O60309 1634 aa23.58■■□□□ 1.36
CLPX-203ENST00000558958 ZNF853P0CG23 659 aa23.57■■□□□ 1.36
CLPX-203ENST00000558958 DUSP27Q5VZP5 1158 aa23.57■■□□□ 1.36
CLPX-203ENST00000558958 IFT57Q9NWB7 429 aa23.57■■□□□ 1.36
CLPX-203ENST00000558958 THSD7AQ9UPZ6 1657 aa23.57■■□□□ 1.36
CLPX-203ENST00000558958 GNAI1P63096 354 aa23.56■■□□□ 1.36
CLPX-203ENST00000558958 CFAP44Q96MT7 982 aa23.56■■□□□ 1.36
CLPX-203ENST00000558958 MYH16Q9H6N6 1097 aa23.56■■□□□ 1.36
CLPX-203ENST00000558958 RGS17Q9UGC6 210 aaPredicted RBP23.54■■□□□ 1.36
CLPX-203ENST00000558958 LAS1LQ9Y4W2 734 aaKnown RBP23.54■■□□□ 1.36
CLPX-203ENST00000558958 SCN11AQ9UI33 1791 aa23.53■■□□□ 1.36
CLPX-203ENST00000558958 A0A0G2JS52 829 aa23.53■■□□□ 1.36
CLPX-203ENST00000558958 CHL1O00533 1208 aa23.53■■□□□ 1.36
CLPX-203ENST00000558958 MYT1Q01538 1121 aa23.53■■□□□ 1.36
CLPX-203ENST00000558958 TEFQ10587 303 aa23.53■■□□□ 1.36
CLPX-203ENST00000558958 FANCIQ9NVI1 1328 aa23.52■■□□□ 1.36
CLPX-203ENST00000558958 RBM6P78332 1123 aaKnown RBP23.52■■□□□ 1.36
CLPX-203ENST00000558958 TAF7Q15545 349 aaPredicted RBP23.52■■□□□ 1.36
CLPX-203ENST00000558958 MARCH10Q8NA82 808 aaPredicted RBP23.52■■□□□ 1.36
CLPX-203ENST00000558958 TSR2Q969E8 191 aaKnown RBP23.52■■□□□ 1.36
CLPX-203ENST00000558958 VIRMAQ69YN4 1812 aaKnown RBP23.52■■□□□ 1.36
CLPX-203ENST00000558958 MBIPQ9NS73 344 aa23.51■■□□□ 1.35
CLPX-203ENST00000558958 SEPT12Q8IYM1 358 aa23.5■■□□□ 1.35
CLPX-203ENST00000558958 SLC52A2Q9HAB3 445 aa23.5■■□□□ 1.35
CLPX-203ENST00000558958 BABAM1Q9NWV8 329 aa23.5■■□□□ 1.35
CLPX-203ENST00000558958 MRC1P22897 1456 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms