RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 LRP5O75197 1615 aa29.46■■■□□ 2.31
CRNDE-205ENST00000558952 KIF7Q2M1P5 1343 aa29.45■■■□□ 2.31
CRNDE-205ENST00000558952 WASHC2AQ641Q2 1341 aa29.45■■■□□ 2.31
CRNDE-205ENST00000558952 POLKQ9UBT6 870 aa29.45■■■□□ 2.31
CRNDE-205ENST00000558952 KNSTRNQ9Y448 316 aa29.45■■■□□ 2.31
CRNDE-205ENST00000558952 TXNRD1Q16881 649 aa29.43■■■□□ 2.3
CRNDE-205ENST00000558952 MAP2P11137 1827 aaKnown RBP29.43■■■□□ 2.3
CRNDE-205ENST00000558952 PROM2Q8N271 834 aa29.41■■■□□ 2.3
CRNDE-205ENST00000558952 MORC1Q86VD1 984 aa29.4■■■□□ 2.3
CRNDE-205ENST00000558952 SYTL4Q96C24 671 aaPredicted RBP29.4■■■□□ 2.3
CRNDE-205ENST00000558952 SHANK3Q9BYB0 1731 aa29.38■■■□□ 2.29
CRNDE-205ENST00000558952 PCDH11XQ9BZA7 1347 aa29.38■■■□□ 2.29
CRNDE-205ENST00000558952 PCDH11YQ9BZA8 1340 aa29.38■■■□□ 2.29
CRNDE-205ENST00000558952 BTAF1O14981 1849 aa29.38■■■□□ 2.29
CRNDE-205ENST00000558952 SRCAPQ6ZRS2 3230 aa29.37■■■□□ 2.29
CRNDE-205ENST00000558952 ANO8Q9HCE9 1232 aaPredicted RBP29.36■■■□□ 2.29
CRNDE-205ENST00000558952 PRIM1P49642 420 aaKnown RBP29.35■■■□□ 2.29
CRNDE-205ENST00000558952 STK32BQ9NY57 414 aa29.35■■■□□ 2.29
CRNDE-205ENST00000558952 DOT1LQ8TEK3 1739 aa29.34■■■□□ 2.29
CRNDE-205ENST00000558952 EYA1Q99502 592 aa29.34■■■□□ 2.29
CRNDE-205ENST00000558952 NCAPD2Q15021 1401 aa29.34■■■□□ 2.29
CRNDE-205ENST00000558952 KAT6BQ8WYB5 2073 aa29.32■■■□□ 2.28
CRNDE-205ENST00000558952 EIF4A2Q14240 407 aaKnown RBP29.32■■■□□ 2.28
CRNDE-205ENST00000558952 SPG7Q9UQ90 795 aa29.3■■■□□ 2.28
CRNDE-205ENST00000558952 SLC15A2Q16348 729 aa29.29■■■□□ 2.28
CRNDE-205ENST00000558952 AMER1Q5JTC6 1135 aaPredicted RBP29.28■■■□□ 2.28
CRNDE-205ENST00000558952 SLC27A3Q5K4L6 730 aa29.27■■■□□ 2.28
CRNDE-205ENST00000558952 SPON1Q9HCB6 807 aa29.27■■■□□ 2.28
CRNDE-205ENST00000558952 PKD1L3Q7Z443 1732 aa29.27■■■□□ 2.28
CRNDE-205ENST00000558952 CYP27B1O15528 508 aa29.25■■■□□ 2.27
CRNDE-205ENST00000558952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.24■■■□□ 2.27
CRNDE-205ENST00000558952 IGSF1Q8N6C5 1336 aa29.22■■■□□ 2.27
CRNDE-205ENST00000558952 LRRC4BQ9NT99 713 aa29.22■■■□□ 2.27
CRNDE-205ENST00000558952 PAPPAQ13219 1627 aa29.22■■■□□ 2.27
CRNDE-205ENST00000558952 PER1O15534 1290 aaPredicted RBP29.21■■■□□ 2.27
CRNDE-205ENST00000558952 PPP1R1BQ9UD71 204 aaPredicted RBP29.21■■■□□ 2.27
CRNDE-205ENST00000558952 CASZ1Q86V15 1759 aa29.21■■■□□ 2.27
CRNDE-205ENST00000558952 CC2D1BQ5T0F9 858 aaKnown RBP29.2■■■□□ 2.26
CRNDE-205ENST00000558952 PLEKHG2Q9H7P9 1386 aa29.2■■■□□ 2.26
CRNDE-205ENST00000558952 MPRIPQ6WCQ1 1025 aa29.19■■■□□ 2.26
CRNDE-205ENST00000558952 IFNL2Q8IZJ0 200 aa29.18■■■□□ 2.26
CRNDE-205ENST00000558952 PDGFDQ9GZP0 370 aaPredicted RBP29.18■■■□□ 2.26
CRNDE-205ENST00000558952 NKX1-1Q15270 411 aaPredicted RBP29.17■■■□□ 2.26
CRNDE-205ENST00000558952 CCNL1Q9UK58 526 aaPredicted RBP29.17■■■□□ 2.26
CRNDE-205ENST00000558952 LY75O60449 1722 aa29.17■■■□□ 2.26
CRNDE-205ENST00000558952 ZBTB7AO95365 584 aa29.16■■■□□ 2.26
CRNDE-205ENST00000558952 ZNF827Q17R98 1081 aa29.16■■■□□ 2.26
CRNDE-205ENST00000558952 PHKG2P15735 406 aa29.15■■■□□ 2.26
CRNDE-205ENST00000558952 KCNQ4P56696 695 aa29.14■■■□□ 2.26
CRNDE-205ENST00000558952 TOGARAM1Q9Y4F4 1720 aa29.14■■■□□ 2.25
CRNDE-205ENST00000558952 MTHFSP49914 203 aa29.13■■■□□ 2.25
CRNDE-205ENST00000558952 PLEKHO1Q53GL0 409 aaPredicted RBP29.13■■■□□ 2.25
CRNDE-205ENST00000558952 AKT1S1Q96B36 256 aa29.13■■■□□ 2.25
CRNDE-205ENST00000558952 NPC1L1Q9UHC9 1359 aa29.13■■■□□ 2.25
CRNDE-205ENST00000558952 CNGB1Q14028 1251 aaPredicted RBP29.12■■■□□ 2.25
CRNDE-205ENST00000558952 SMARCC1Q92922 1105 aaPredicted RBP29.12■■■□□ 2.25
CRNDE-205ENST00000558952 PALLDQ8WX93 1383 aa29.12■■■□□ 2.25
CRNDE-205ENST00000558952 HMGB2P26583 209 aaKnown RBP29.11■■■□□ 2.25
CRNDE-205ENST00000558952 AMOTQ4VCS5 1084 aa29.11■■■□□ 2.25
CRNDE-205ENST00000558952 MTFR1LQ9H019 292 aa29.11■■■□□ 2.25
CRNDE-205ENST00000558952 ATF5Q9Y2D1 282 aaPredicted RBP29.11■■■□□ 2.25
CRNDE-205ENST00000558952 IL13P35225 146 aa29.1■■■□□ 2.25
CRNDE-205ENST00000558952 SULT6B1Q6IMI4 303 aa29.1■■■□□ 2.25
CRNDE-205ENST00000558952 TMOD3Q9NYL9 352 aa29.1■■■□□ 2.25
CRNDE-205ENST00000558952 TFCP2L1Q9NZI6 479 aa29.1■■■□□ 2.25
CRNDE-205ENST00000558952 AEBP1Q8IUX7 1158 aa29.09■■■□□ 2.25
CRNDE-205ENST00000558952 ITGB4P16144 1822 aa29.08■■■□□ 2.25
CRNDE-205ENST00000558952 HSP90AB1P08238 724 aaKnown RBP29.08■■■□□ 2.25
CRNDE-205ENST00000558952 PIGBQ92521 554 aa29.08■■■□□ 2.25
CRNDE-205ENST00000558952 ZNF530Q6P9A1 599 aaPredicted RBP29.06■■■□□ 2.24
CRNDE-205ENST00000558952 KDRP35968 1356 aa29.05■■■□□ 2.24
CRNDE-205ENST00000558952 C1orf141Q5JVX7 400 aa29.04■■■□□ 2.24
CRNDE-205ENST00000558952 QSER1Q2KHR3 1735 aa29.03■■■□□ 2.24
CRNDE-205ENST00000558952 PNPLA7Q6ZV29 1317 aa29.03■■■□□ 2.24
CRNDE-205ENST00000558952 DIAPH1O60610 1272 aaKnown RBP29.03■■■□□ 2.24
CRNDE-205ENST00000558952 PTGER2P43116 358 aa29.03■■■□□ 2.24
CRNDE-205ENST00000558952 SLC16A10Q8TF71 515 aa29.03■■■□□ 2.24
CRNDE-205ENST00000558952 DCAF5Q96JK2 942 aa29.03■■■□□ 2.24
CRNDE-205ENST00000558952 ERVV-2B6SEH9 535 aa29.01■■■□□ 2.23
CRNDE-205ENST00000558952 C5P01031 1676 aa29.01■■■□□ 2.23
CRNDE-205ENST00000558952 MSH5O43196 834 aa28.98■■■□□ 2.23
CRNDE-205ENST00000558952 HMOX1P09601 288 aa28.97■■■□□ 2.23
CRNDE-205ENST00000558952 ASAP1Q9ULH1 1129 aa28.97■■■□□ 2.23
CRNDE-205ENST00000558952 TUBGCP6Q96RT7 1819 aa28.97■■■□□ 2.23
CRNDE-205ENST00000558952 LOC102724428A0A0B4J2F2 783 aa28.96■■■□□ 2.23
CRNDE-205ENST00000558952 SIK1P57059 783 aa28.96■■■□□ 2.23
CRNDE-205ENST00000558952 CABP4P57796 275 aa28.96■■■□□ 2.23
CRNDE-205ENST00000558952 SGIP1Q9BQI5 828 aa28.96■■■□□ 2.23
CRNDE-205ENST00000558952 DCAF8L1A6NGE4 600 aa28.95■■■□□ 2.22
CRNDE-205ENST00000558952 AK7Q96M32 723 aa28.95■■■□□ 2.22
CRNDE-205ENST00000558952 KDM6AO15550 1401 aaPredicted RBP28.94■■■□□ 2.22
CRNDE-205ENST00000558952 POLD1P28340 1107 aa28.94■■■□□ 2.22
CRNDE-205ENST00000558952 ARXQ96QS3 562 aa28.94■■■□□ 2.22
CRNDE-205ENST00000558952 ATG3Q9NT62 314 aa28.94■■■□□ 2.22
CRNDE-205ENST00000558952 TAF1LQ8IZX4 1826 aa28.93■■■□□ 2.22
CRNDE-205ENST00000558952 FLAD1Q8NFF5 587 aa28.93■■■□□ 2.22
CRNDE-205ENST00000558952 CFAP53Q96M91 514 aa28.93■■■□□ 2.22
CRNDE-205ENST00000558952 C4BP0C0L5 1744 aa28.92■■■□□ 2.22
CRNDE-205ENST00000558952 U2SURPO15042 1029 aaKnown RBP28.92■■■□□ 2.22
CRNDE-205ENST00000558952 ATP6V1AP38606 617 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms