RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
RORA-208ENST00000558904 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
RORA-208ENST00000558904 APLP1P51693 650 aa12.63□□□□□ -0.39
RORA-208ENST00000558904 DDX54Q8TDD1 881 aaKnown RBP12.63□□□□□ -0.39
RORA-208ENST00000558904 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
RORA-208ENST00000558904 KTN1Q86UP2 1357 aaKnown RBP12.62□□□□□ -0.39
RORA-208ENST00000558904 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
RORA-208ENST00000558904 GOLGB1Q14789 3259 aaKnown RBP12.62□□□□□ -0.39
RORA-208ENST00000558904 USP31Q70CQ4 1352 aa12.61□□□□□ -0.39
RORA-208ENST00000558904 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
RORA-208ENST00000558904 NFAT5O94916 1531 aa12.61□□□□□ -0.39
RORA-208ENST00000558904 ANKRD36BQ8N2N9 1353 aa12.6□□□□□ -0.39
RORA-208ENST00000558904 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
RORA-208ENST00000558904 COL23A1Q86Y22 540 aaPredicted RBP12.6□□□□□ -0.39
RORA-208ENST00000558904 ZNF526Q8TF50 670 aaPredicted RBP12.6□□□□□ -0.39
RORA-208ENST00000558904 ADCY9O60503 1353 aa12.59□□□□□ -0.39
RORA-208ENST00000558904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
RORA-208ENST00000558904 USP47Q96K76 1375 aa12.57□□□□□ -0.4
RORA-208ENST00000558904 TOMM70O94826 608 aa12.57□□□□□ -0.4
RORA-208ENST00000558904 KCNQ4P56696 695 aa12.57□□□□□ -0.4
RORA-208ENST00000558904 IP6K1Q92551 441 aa12.57□□□□□ -0.4
RORA-208ENST00000558904 KIF3CO14782 793 aa12.56□□□□□ -0.4
RORA-208ENST00000558904 ZCRB1Q8TBF4 217 aaKnown RBP12.56□□□□□ -0.4
RORA-208ENST00000558904 MSL1Q68DK7 614 aa12.55□□□□□ -0.4
RORA-208ENST00000558904 HDGFL2Q7Z4V5 671 aaPredicted RBP12.55□□□□□ -0.4
RORA-208ENST00000558904 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
RORA-208ENST00000558904 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
RORA-208ENST00000558904 LY75O60449 1722 aa12.54□□□□□ -0.4
RORA-208ENST00000558904 NME9Q86XW9 330 aa12.53□□□□□ -0.4
RORA-208ENST00000558904 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
RORA-208ENST00000558904 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
RORA-208ENST00000558904 TUBGCP6Q96RT7 1819 aa12.53□□□□□ -0.4
RORA-208ENST00000558904 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
RORA-208ENST00000558904 TERF2IPQ9NYB0 399 aa12.52□□□□□ -0.41
RORA-208ENST00000558904 LTN1O94822 1766 aa12.51□□□□□ -0.41
RORA-208ENST00000558904 TMC1Q8TDI8 760 aa12.51□□□□□ -0.41
RORA-208ENST00000558904 NSD2O96028 1365 aa12.51□□□□□ -0.41
RORA-208ENST00000558904 NSD3Q9BZ95 1437 aa12.51□□□□□ -0.41
RORA-208ENST00000558904 AMPHP49418 695 aa12.5□□□□□ -0.41
RORA-208ENST00000558904 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
RORA-208ENST00000558904 AK7Q96M32 723 aa12.5□□□□□ -0.41
RORA-208ENST00000558904 USP54Q70EL1 1684 aa12.5□□□□□ -0.41
RORA-208ENST00000558904 MON2Q7Z3U7 1717 aa12.49□□□□□ -0.41
RORA-208ENST00000558904 FAM208AQ9UK61 1670 aaKnown RBP12.49□□□□□ -0.41
RORA-208ENST00000558904 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
RORA-208ENST00000558904 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
RORA-208ENST00000558904 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
RORA-208ENST00000558904 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
RORA-208ENST00000558904 RBM46Q8TBY0 533 aaKnown RBP12.48□□□□□ -0.41
RORA-208ENST00000558904 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
RORA-208ENST00000558904 KLRG1Q96E93 195 aa12.48□□□□□ -0.41
RORA-208ENST00000558904 SSFA2P28290 1259 aa12.47□□□□□ -0.41
RORA-208ENST00000558904 PRELPP51888 382 aa12.47□□□□□ -0.41
RORA-208ENST00000558904 TGFB2P61812 414 aa12.47□□□□□ -0.41
RORA-208ENST00000558904 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
RORA-208ENST00000558904 L3MBTL2Q969R5 705 aa12.47□□□□□ -0.41
RORA-208ENST00000558904 COG3Q96JB2 828 aa12.47□□□□□ -0.41
RORA-208ENST00000558904 PUS7Q96PZ0 661 aaKnown RBP12.47□□□□□ -0.41
RORA-208ENST00000558904 DOT1LQ8TEK3 1739 aa12.47□□□□□ -0.41
RORA-208ENST00000558904 PALLDQ8WX93 1383 aa12.46□□□□□ -0.41
RORA-208ENST00000558904 TATP17735 454 aaPredicted RBP12.46□□□□□ -0.41
RORA-208ENST00000558904 HOXC9P31274 260 aa12.46□□□□□ -0.41
RORA-208ENST00000558904 FSTL1Q12841 308 aa12.46□□□□□ -0.41
RORA-208ENST00000558904 COL13A1Q5TAT6 717 aaPredicted RBP12.46□□□□□ -0.41
RORA-208ENST00000558904 TNS4Q8IZW8 715 aa12.46□□□□□ -0.41
RORA-208ENST00000558904 SLC12A5Q9H2X9 1139 aa12.46□□□□□ -0.41
RORA-208ENST00000558904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
RORA-208ENST00000558904 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
RORA-208ENST00000558904 MAP3K19Q56UN5 1328 aa12.44□□□□□ -0.42
RORA-208ENST00000558904 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
RORA-208ENST00000558904 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
RORA-208ENST00000558904 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
RORA-208ENST00000558904 WWC3Q9ULE0 1092 aa12.44□□□□□ -0.42
RORA-208ENST00000558904 C5P01031 1676 aa12.44□□□□□ -0.42
RORA-208ENST00000558904 CD163L1Q9NR16 1453 aa12.43□□□□□ -0.42
RORA-208ENST00000558904 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
RORA-208ENST00000558904 PHF14O94880 888 aa12.43□□□□□ -0.42
RORA-208ENST00000558904 ARHGAP27Q6ZUM4 889 aa12.43□□□□□ -0.42
RORA-208ENST00000558904 BCS1LQ9Y276 419 aa12.43□□□□□ -0.42
RORA-208ENST00000558904 KDM2BQ8NHM5 1336 aa12.42□□□□□ -0.42
RORA-208ENST00000558904 NBPF6Q5VWK0 638 aa12.42□□□□□ -0.42
RORA-208ENST00000558904 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
RORA-208ENST00000558904 NBPF4Q96M43 638 aa12.42□□□□□ -0.42
RORA-208ENST00000558904 NMRK2Q9NPI5 230 aa12.42□□□□□ -0.42
RORA-208ENST00000558904 SMG6Q86US8 1419 aaKnown RBP12.42□□□□□ -0.42
RORA-208ENST00000558904 CICQ96RK0 1608 aaPredicted RBP12.41□□□□□ -0.42
RORA-208ENST00000558904 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
RORA-208ENST00000558904 MEGF6O75095 1541 aa12.41□□□□□ -0.42
RORA-208ENST00000558904 RTL1A6NKG5 1358 aa12.41□□□□□ -0.42
RORA-208ENST00000558904 PLEKHG2Q9H7P9 1386 aa12.41□□□□□ -0.42
RORA-208ENST00000558904 C4BP0C0L5 1744 aa12.4□□□□□ -0.42
RORA-208ENST00000558904 MMP10P09238 476 aa12.4□□□□□ -0.42
RORA-208ENST00000558904 A0A1W2PP64 1363 aa12.4□□□□□ -0.42
RORA-208ENST00000558904 WDR90Q96KV7 1748 aa12.4□□□□□ -0.43
RORA-208ENST00000558904 LOC102724428A0A0B4J2F2 783 aa12.39□□□□□ -0.43
RORA-208ENST00000558904 FCHSD2O94868 740 aa12.39□□□□□ -0.43
RORA-208ENST00000558904 KCNA4P22459 653 aa12.39□□□□□ -0.43
RORA-208ENST00000558904 SIK1P57059 783 aa12.39□□□□□ -0.43
RORA-208ENST00000558904 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
RORA-208ENST00000558904 A0A0G2JLW4 131 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms