RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 NBPF14Q5TI25 921 aa7.78□□□□□ -1.16
SMAD3-209ENST00000558894 NBPF6Q5VWK0 638 aa7.78□□□□□ -1.16
SMAD3-209ENST00000558894 ACSBG1Q96GR2 724 aa7.78□□□□□ -1.16
SMAD3-209ENST00000558894 NBPF4Q96M43 638 aa7.78□□□□□ -1.16
SMAD3-209ENST00000558894 NSD3Q9BZ95 1437 aa7.78□□□□□ -1.16
SMAD3-209ENST00000558894 C5P01031 1676 aa7.77□□□□□ -1.17
SMAD3-209ENST00000558894 INSRP06213 1382 aa7.77□□□□□ -1.17
SMAD3-209ENST00000558894 KIF24Q5T7B8 1368 aa7.77□□□□□ -1.17
SMAD3-209ENST00000558894 HSP90AB2PQ58FF8 381 aa7.77□□□□□ -1.17
SMAD3-209ENST00000558894 LTV1Q96GA3 475 aaPredicted RBP7.77□□□□□ -1.17
SMAD3-209ENST00000558894 PCGF6Q9BYE7 350 aa7.77□□□□□ -1.17
SMAD3-209ENST00000558894 LRRC4BQ9NT99 713 aa7.77□□□□□ -1.17
SMAD3-209ENST00000558894 PTGER2P43116 358 aa7.76□□□□□ -1.17
SMAD3-209ENST00000558894 SLC15A2Q16348 729 aa7.76□□□□□ -1.17
SMAD3-209ENST00000558894 SGIP1Q9BQI5 828 aa7.76□□□□□ -1.17
SMAD3-209ENST00000558894 FLT4P35916 1363 aa7.75□□□□□ -1.17
SMAD3-209ENST00000558894 AMPHP49418 695 aa7.75□□□□□ -1.17
SMAD3-209ENST00000558894 ZNF827Q17R98 1081 aa7.75□□□□□ -1.17
SMAD3-209ENST00000558894 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
SMAD3-209ENST00000558894 USHBP1Q8N6Y0 703 aa7.75□□□□□ -1.17
SMAD3-209ENST00000558894 EMILIN1Q9Y6C2 1016 aa7.75□□□□□ -1.17
SMAD3-209ENST00000558894 VIRMAQ69YN4 1812 aaKnown RBP7.74□□□□□ -1.17
SMAD3-209ENST00000558894 ZCRB1Q8TBF4 217 aaKnown RBP7.74□□□□□ -1.17
SMAD3-209ENST00000558894 DDX54Q8TDD1 881 aaKnown RBP7.74□□□□□ -1.17
SMAD3-209ENST00000558894 AKT1S1Q96B36 256 aa7.74□□□□□ -1.17
SMAD3-209ENST00000558894 SPON1Q9HCB6 807 aa7.74□□□□□ -1.17
SMAD3-209ENST00000558894 UBR3Q6ZT12 1888 aa7.74□□□□□ -1.17
SMAD3-209ENST00000558894 SMG6Q86US8 1419 aaKnown RBP7.73□□□□□ -1.17
SMAD3-209ENST00000558894 HSPA5P11021 654 aaKnown RBP7.73□□□□□ -1.17
SMAD3-209ENST00000558894 PRIM1P49642 420 aaKnown RBP7.73□□□□□ -1.17
SMAD3-209ENST00000558894 CGNL1Q0VF96 1302 aa7.73□□□□□ -1.17
SMAD3-209ENST00000558894 WASHC2AQ641Q2 1341 aa7.73□□□□□ -1.17
SMAD3-209ENST00000558894 CYP27B1O15528 508 aa7.72□□□□□ -1.17
SMAD3-209ENST00000558894 ZBTB7AO95365 584 aa7.72□□□□□ -1.17
SMAD3-209ENST00000558894 KCNQ4P56696 695 aa7.72□□□□□ -1.17
SMAD3-209ENST00000558894 STK32BQ9NY57 414 aa7.72□□□□□ -1.17
SMAD3-209ENST00000558894 POLKQ9UBT6 870 aa7.72□□□□□ -1.17
SMAD3-209ENST00000558894 PNPLA7Q6ZV29 1317 aa7.72□□□□□ -1.17
SMAD3-209ENST00000558894 C4BP0C0L5 1744 aa7.72□□□□□ -1.17
SMAD3-209ENST00000558894 CHD4Q14839 1912 aa7.72□□□□□ -1.17
SMAD3-209ENST00000558894 ZNF831Q5JPB2 1677 aa7.71□□□□□ -1.18
SMAD3-209ENST00000558894 ADRA2BP18089 450 aa7.71□□□□□ -1.18
SMAD3-209ENST00000558894 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
SMAD3-209ENST00000558894 MTFR1LQ9H019 292 aa7.71□□□□□ -1.18
SMAD3-209ENST00000558894 ATF5Q9Y2D1 282 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-209ENST00000558894 COL5A3P25940 1745 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-209ENST00000558894 GOLGB1Q14789 3259 aaKnown RBP7.7□□□□□ -1.18
SMAD3-209ENST00000558894 EIF4G2P78344 907 aaKnown RBP eCLIP7.7□□□□□ -1.18
SMAD3-209ENST00000558894 NKX1-1Q15270 411 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-209ENST00000558894 EYA1Q99502 592 aa7.7□□□□□ -1.18
SMAD3-209ENST00000558894 PCDH10Q9P2E7 1040 aa7.7□□□□□ -1.18
SMAD3-209ENST00000558894 SCN11AQ9UI33 1791 aa7.69□□□□□ -1.18
SMAD3-209ENST00000558894 TATP17735 454 aaPredicted RBP7.69□□□□□ -1.18
SMAD3-209ENST00000558894 EIF4A2Q14240 407 aaKnown RBP7.69□□□□□ -1.18
SMAD3-209ENST00000558894 CCER1Q8TC90 406 aaPredicted RBP7.69□□□□□ -1.18
SMAD3-209ENST00000558894 RAPGEF4Q8WZA2 1011 aa7.69□□□□□ -1.18
SMAD3-209ENST00000558894 SYT17Q9BSW7 474 aa7.69□□□□□ -1.18
SMAD3-209ENST00000558894 PANK3Q9H999 370 aa7.69□□□□□ -1.18
SMAD3-209ENST00000558894 PCDH11XQ9BZA7 1347 aa7.69□□□□□ -1.18
SMAD3-209ENST00000558894 PCDH11YQ9BZA8 1340 aa7.69□□□□□ -1.18
SMAD3-209ENST00000558894 MAP3K5Q99683 1374 aa7.69□□□□□ -1.18
SMAD3-209ENST00000558894 CICQ96RK0 1608 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-209ENST00000558894 C1QTNF8P60827 252 aa7.68□□□□□ -1.18
SMAD3-209ENST00000558894 SYTL4Q96C24 671 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-209ENST00000558894 FHDC1Q9C0D6 1143 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-209ENST00000558894 IGSF1Q8N6C5 1336 aa7.68□□□□□ -1.18
SMAD3-209ENST00000558894 PLEKHG2Q9H7P9 1386 aa7.68□□□□□ -1.18
SMAD3-209ENST00000558894 ADAMTS7Q9UKP4 1686 aa7.67□□□□□ -1.18
SMAD3-209ENST00000558894 KIAA1551Q9HCM1 1747 aa7.67□□□□□ -1.18
SMAD3-209ENST00000558894 PPM1GO15355 546 aaPredicted RBP7.67□□□□□ -1.18
SMAD3-209ENST00000558894 PER1O15534 1290 aaPredicted RBP7.67□□□□□ -1.18
SMAD3-209ENST00000558894 AMIGO3Q86WK7 504 aa7.67□□□□□ -1.18
SMAD3-209ENST00000558894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMAD3-209ENST00000558894 PPP1R1BQ9UD71 204 aaPredicted RBP7.67□□□□□ -1.18
SMAD3-209ENST00000558894 CCNL1Q9UK58 526 aaPredicted RBP7.67□□□□□ -1.18
SMAD3-209ENST00000558894 MYH14Q7Z406 1995 aaKnown RBP7.67□□□□□ -1.18
SMAD3-209ENST00000558894 C4AP0C0L4 1744 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 TJP1Q07157 1748 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 PHKG2P15735 406 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 TNNT2P45379 298 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-209ENST00000558894 AMER1Q5JTC6 1135 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-209ENST00000558894 MPRIPQ6WCQ1 1025 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 COL23A1Q86Y22 540 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-209ENST00000558894 PIAS4Q8N2W9 510 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-209ENST00000558894 SLC16A10Q8TF71 515 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 PIGBQ92521 554 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 ARXQ96QS3 562 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 KIF7Q2M1P5 1343 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 PALLDQ8WX93 1383 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 KDM6AO15550 1401 aaPredicted RBP7.66□□□□□ -1.18
SMAD3-209ENST00000558894 KIF13BQ9NQT8 1826 aa7.66□□□□□ -1.18
SMAD3-209ENST00000558894 KDRP35968 1356 aa7.65□□□□□ -1.18
SMAD3-209ENST00000558894 POLR3GLQ9BT43 218 aa7.65□□□□□ -1.18
SMAD3-209ENST00000558894 SIPA1L3O60292 1781 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-209ENST00000558894 COL3A1P02461 1466 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-209ENST00000558894 AEBP1Q8IUX7 1158 aa7.64□□□□□ -1.19
SMAD3-209ENST00000558894 ZNF784Q8NCA9 323 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-209ENST00000558894 SLC4A9Q96Q91 983 aa7.64□□□□□ -1.19
SMAD3-209ENST00000558894 TFCP2L1Q9NZI6 479 aa7.64□□□□□ -1.19
SMAD3-209ENST00000558894 SPG7Q9UQ90 795 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms