RNA–Protein interactions for RNA: ENST00000558859.5

CPNE6-209, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-209ENST00000558859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.66■□□□□ 0.9
CPNE6-209ENST00000558859 DDX54Q8TDD1 881 aaKnown RBP20.66■□□□□ 0.9
CPNE6-209ENST00000558859 IP6K1Q92551 441 aa20.64■□□□□ 0.89
CPNE6-209ENST00000558859 L3MBTL2Q969R5 705 aa20.63■□□□□ 0.89
CPNE6-209ENST00000558859 CCNL1Q9UK58 526 aaPredicted RBP20.63■□□□□ 0.89
CPNE6-209ENST00000558859 TAF1LQ8IZX4 1826 aa20.62■□□□□ 0.89
CPNE6-209ENST00000558859 EDC4Q6P2E9 1401 aaKnown RBP20.61■□□□□ 0.89
CPNE6-209ENST00000558859 RGPD2P0DJD1 1756 aa20.6■□□□□ 0.89
CPNE6-209ENST00000558859 SYTL4Q96C24 671 aaPredicted RBP20.6■□□□□ 0.89
CPNE6-209ENST00000558859 C5P01031 1676 aa20.6■□□□□ 0.89
CPNE6-209ENST00000558859 KIF3CO14782 793 aa20.59■□□□□ 0.89
CPNE6-209ENST00000558859 MSL1Q68DK7 614 aa20.58■□□□□ 0.89
CPNE6-209ENST00000558859 ROCK2O75116 1388 aaKnown RBP20.58■□□□□ 0.88
CPNE6-209ENST00000558859 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
CPNE6-209ENST00000558859 MEGF6O75095 1541 aa20.57■□□□□ 0.88
CPNE6-209ENST00000558859 MSH5O43196 834 aa20.56■□□□□ 0.88
CPNE6-209ENST00000558859 USP47Q96K76 1375 aa20.56■□□□□ 0.88
CPNE6-209ENST00000558859 FLAD1Q8NFF5 587 aa20.55■□□□□ 0.88
CPNE6-209ENST00000558859 SLC12A5Q9H2X9 1139 aa20.55■□□□□ 0.88
CPNE6-209ENST00000558859 TOGARAM1Q9Y4F4 1720 aa20.54■□□□□ 0.88
CPNE6-209ENST00000558859 DNAJC5GQ8N7S2 189 aa20.54■□□□□ 0.88
CPNE6-209ENST00000558859 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
CPNE6-209ENST00000558859 UBR3Q6ZT12 1888 aa20.54■□□□□ 0.88
CPNE6-209ENST00000558859 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
CPNE6-209ENST00000558859 HMGB2P26583 209 aaKnown RBP20.53■□□□□ 0.88
CPNE6-209ENST00000558859 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
CPNE6-209ENST00000558859 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
CPNE6-209ENST00000558859 A0A1W2PP64 1363 aa20.52■□□□□ 0.88
CPNE6-209ENST00000558859 HOXC9P31274 260 aa20.52■□□□□ 0.88
CPNE6-209ENST00000558859 MAP3K19Q56UN5 1328 aa20.52■□□□□ 0.87
CPNE6-209ENST00000558859 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
CPNE6-209ENST00000558859 IGSF1Q8N6C5 1336 aa20.51■□□□□ 0.87
CPNE6-209ENST00000558859 C4BP0C0L5 1744 aa20.5■□□□□ 0.87
CPNE6-209ENST00000558859 APLP1P51693 650 aa20.5■□□□□ 0.87
CPNE6-209ENST00000558859 AMIGO3Q86WK7 504 aa20.5■□□□□ 0.87
CPNE6-209ENST00000558859 PUS7Q96PZ0 661 aaKnown RBP20.5■□□□□ 0.87
CPNE6-209ENST00000558859 TMC1Q8TDI8 760 aa20.49■□□□□ 0.87
CPNE6-209ENST00000558859 TERF2IPQ9NYB0 399 aa20.49■□□□□ 0.87
CPNE6-209ENST00000558859 ITGB4P16144 1822 aa20.48■□□□□ 0.87
CPNE6-209ENST00000558859 PALLDQ8WX93 1383 aa20.46■□□□□ 0.87
CPNE6-209ENST00000558859 MAP2P11137 1827 aaKnown RBP20.46■□□□□ 0.87
CPNE6-209ENST00000558859 KIF13BQ9NQT8 1826 aa20.46■□□□□ 0.87
CPNE6-209ENST00000558859 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
CPNE6-209ENST00000558859 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
CPNE6-209ENST00000558859 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
CPNE6-209ENST00000558859 KIAA1551Q9HCM1 1747 aa20.44■□□□□ 0.86
CPNE6-209ENST00000558859 TOMM70O94826 608 aa20.44■□□□□ 0.86
CPNE6-209ENST00000558859 FBLN1P23142 703 aa20.44■□□□□ 0.86
CPNE6-209ENST00000558859 PCNTO95613 3336 aa20.43■□□□□ 0.86
CPNE6-209ENST00000558859 AMPHP49418 695 aa20.43■□□□□ 0.86
CPNE6-209ENST00000558859 COG3Q96JB2 828 aa20.42■□□□□ 0.86
CPNE6-209ENST00000558859 SIN3AQ96ST3 1273 aa20.42■□□□□ 0.86
CPNE6-209ENST00000558859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.41■□□□□ 0.86
CPNE6-209ENST00000558859 NSD3Q9BZ95 1437 aa20.41■□□□□ 0.86
CPNE6-209ENST00000558859 SSFA2P28290 1259 aa20.4■□□□□ 0.86
CPNE6-209ENST00000558859 RAPGEF4Q8WZA2 1011 aa20.4■□□□□ 0.86
CPNE6-209ENST00000558859 SMARCC1Q92922 1105 aaPredicted RBP20.4■□□□□ 0.86
CPNE6-209ENST00000558859 WDR90Q96KV7 1748 aa20.4■□□□□ 0.86
CPNE6-209ENST00000558859 AK7Q96M32 723 aa20.4■□□□□ 0.86
CPNE6-209ENST00000558859 PCDH11XQ9BZA7 1347 aa20.4■□□□□ 0.86
CPNE6-209ENST00000558859 PCDH11YQ9BZA8 1340 aa20.4■□□□□ 0.86
CPNE6-209ENST00000558859 WWC3Q9ULE0 1092 aa20.4■□□□□ 0.86
CPNE6-209ENST00000558859 CYP27B1O15528 508 aa20.39■□□□□ 0.85
CPNE6-209ENST00000558859 PXDNLA1KZ92 1463 aa20.38■□□□□ 0.85
CPNE6-209ENST00000558859 MPRIPQ6WCQ1 1025 aa20.38■□□□□ 0.85
CPNE6-209ENST00000558859 SMIM5Q71RC9 77 aa20.38■□□□□ 0.85
CPNE6-209ENST00000558859 USHBP1Q8N6Y0 703 aa20.38■□□□□ 0.85
CPNE6-209ENST00000558859 JMYQ8N9B5 988 aa20.38■□□□□ 0.85
CPNE6-209ENST00000558859 BRCA1P38398 1863 aaKnown RBP20.37■□□□□ 0.85
CPNE6-209ENST00000558859 PKD1L3Q7Z443 1732 aa20.37■□□□□ 0.85
CPNE6-209ENST00000558859 TATP17735 454 aaPredicted RBP20.37■□□□□ 0.85
CPNE6-209ENST00000558859 N4BP2Q86UW6 1770 aaPredicted RBP20.36■□□□□ 0.85
CPNE6-209ENST00000558859 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
CPNE6-209ENST00000558859 PHF14O94880 888 aa20.35■□□□□ 0.85
CPNE6-209ENST00000558859 RRS1Q15050 365 aaKnown RBP20.35■□□□□ 0.85
CPNE6-209ENST00000558859 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
CPNE6-209ENST00000558859 PIGBQ92521 554 aa20.35■□□□□ 0.85
CPNE6-209ENST00000558859 INSRP06213 1382 aa20.34■□□□□ 0.85
CPNE6-209ENST00000558859 COL13A1Q5TAT6 717 aaPredicted RBP20.34■□□□□ 0.85
CPNE6-209ENST00000558859 LINC00116Q8NCU8 138 aa20.34■□□□□ 0.85
CPNE6-209ENST00000558859 RBM46Q8TBY0 533 aaKnown RBP20.34■□□□□ 0.85
CPNE6-209ENST00000558859 NMRK2Q9NPI5 230 aa20.34■□□□□ 0.85
CPNE6-209ENST00000558859 LOC102724428A0A0B4J2F2 783 aa20.33■□□□□ 0.85
CPNE6-209ENST00000558859 SIK1P57059 783 aa20.33■□□□□ 0.85
CPNE6-209ENST00000558859 TGFB2P61812 414 aa20.33■□□□□ 0.85
CPNE6-209ENST00000558859 KLRG1Q96E93 195 aa20.33■□□□□ 0.85
CPNE6-209ENST00000558859 TESK2Q96S53 571 aa20.33■□□□□ 0.85
CPNE6-209ENST00000558859 NCAPD2Q15021 1401 aa20.33■□□□□ 0.84
CPNE6-209ENST00000558859 SMG6Q86US8 1419 aaKnown RBP20.33■□□□□ 0.84
CPNE6-209ENST00000558859 ARFGEF1Q9Y6D6 1849 aa20.32■□□□□ 0.84
CPNE6-209ENST00000558859 FYB1O15117 783 aa20.31■□□□□ 0.84
CPNE6-209ENST00000558859 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
CPNE6-209ENST00000558859 KIF24Q5T7B8 1368 aa20.31■□□□□ 0.84
CPNE6-209ENST00000558859 C10orf71Q711Q0 1435 aa20.3■□□□□ 0.84
CPNE6-209ENST00000558859 MMP10P09238 476 aa20.3■□□□□ 0.84
CPNE6-209ENST00000558859 NEUROD1Q13562 356 aa20.3■□□□□ 0.84
CPNE6-209ENST00000558859 ITPK1Q13572 414 aa20.29■□□□□ 0.84
CPNE6-209ENST00000558859 FSTL1Q12841 308 aa20.28■□□□□ 0.84
CPNE6-209ENST00000558859 FLT4P35916 1363 aa20.27■□□□□ 0.84
CPNE6-209ENST00000558859 A0A0G2JLW4 131 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms