RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 C1QTNF8P60827 252 aa14.31□□□□□ -0.12
SPG11-212ENST00000558790 PSME1Q06323 249 aa14.31□□□□□ -0.12
SPG11-212ENST00000558790 TOPAZ1Q8N9V7 1692 aa14.3□□□□□ -0.12
SPG11-212ENST00000558790 LHX8Q68G74 356 aa14.3□□□□□ -0.12
SPG11-212ENST00000558790 LMOD2Q6P5Q4 547 aa14.3□□□□□ -0.12
SPG11-212ENST00000558790 OTUD5Q96G74 571 aa14.3□□□□□ -0.12
SPG11-212ENST00000558790 CCDC9Q9Y3X0 531 aaKnown RBP14.3□□□□□ -0.12
SPG11-212ENST00000558790 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
SPG11-212ENST00000558790 TESPA1A2RU30 521 aaPredicted RBP14.29□□□□□ -0.12
SPG11-212ENST00000558790 PDIA6Q15084 440 aa14.29□□□□□ -0.12
SPG11-212ENST00000558790 CAMKK2Q96RR4 588 aa14.29□□□□□ -0.12
SPG11-212ENST00000558790 A0A0G2JS52 829 aa14.28□□□□□ -0.12
SPG11-212ENST00000558790 MYT1Q01538 1121 aa14.28□□□□□ -0.12
SPG11-212ENST00000558790 FAM98CQ17RN3 349 aaKnown RBP14.28□□□□□ -0.12
SPG11-212ENST00000558790 PMFBP1Q8TBY8 1022 aa14.28□□□□□ -0.12
SPG11-212ENST00000558790 FAM83GA6ND36 823 aa14.27□□□□□ -0.13
SPG11-212ENST00000558790 MLLT3P42568 568 aaPredicted RBP14.27□□□□□ -0.13
SPG11-212ENST00000558790 PTCD2Q8WV60 388 aaKnown RBP14.27□□□□□ -0.13
SPG11-212ENST00000558790 RAB3GAP2Q9H2M9 1393 aa14.26□□□□□ -0.13
SPG11-212ENST00000558790 PRR36Q9H6K5 1346 aa14.26□□□□□ -0.13
SPG11-212ENST00000558790 SLC34A2O95436 690 aa14.26□□□□□ -0.13
SPG11-212ENST00000558790 PRKCSHP14314 528 aaPredicted RBP14.26□□□□□ -0.13
SPG11-212ENST00000558790 HOXB3P14651 431 aaPredicted RBP14.26□□□□□ -0.13
SPG11-212ENST00000558790 HIRIP3Q9BW71 556 aaPredicted RBP14.26□□□□□ -0.13
SPG11-212ENST00000558790 POGKQ9P215 609 aa14.26□□□□□ -0.13
SPG11-212ENST00000558790 GOLGB1Q14789 3259 aaKnown RBP14.26□□□□□ -0.13
SPG11-212ENST00000558790 ATP7BP35670 1465 aa14.25□□□□□ -0.13
SPG11-212ENST00000558790 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
SPG11-212ENST00000558790 SPDYE16A6NNV3 312 aaPredicted RBP14.25□□□□□ -0.13
SPG11-212ENST00000558790 GPRASP1Q5JY77 1395 aa14.24□□□□□ -0.13
SPG11-212ENST00000558790 NINLQ9Y2I6 1382 aa14.24□□□□□ -0.13
SPG11-212ENST00000558790 MINK1Q8N4C8 1332 aaPredicted RBP14.24□□□□□ -0.13
SPG11-212ENST00000558790 ACIN1Q9UKV3 1341 aaKnown RBP14.24□□□□□ -0.13
SPG11-212ENST00000558790 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
SPG11-212ENST00000558790 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
SPG11-212ENST00000558790 NRKQ7Z2Y5 1582 aa14.23□□□□□ -0.13
SPG11-212ENST00000558790 BTG4Q9NY30 223 aa14.23□□□□□ -0.13
SPG11-212ENST00000558790 TRAK1Q9UPV9 953 aa14.23□□□□□ -0.13
SPG11-212ENST00000558790 PCDHGA4Q9Y5G9 962 aa14.23□□□□□ -0.13
SPG11-212ENST00000558790 MYOM1P52179 1685 aa14.23□□□□□ -0.13
SPG11-212ENST00000558790 KIAA1210Q9ULL0 1709 aa14.22□□□□□ -0.13
SPG11-212ENST00000558790 EVI5O60447 810 aa14.22□□□□□ -0.13
SPG11-212ENST00000558790 TBC1D12O60347 775 aa14.21□□□□□ -0.13
SPG11-212ENST00000558790 TRIM37O94972 964 aa14.21□□□□□ -0.13
SPG11-212ENST00000558790 CASZ1Q86V15 1759 aa14.21□□□□□ -0.13
SPG11-212ENST00000558790 LMO7Q8WWI1 1683 aa14.2□□□□□ -0.14
SPG11-212ENST00000558790 SPATA31A5Q5VU36 1347 aa14.2□□□□□ -0.14
SPG11-212ENST00000558790 SPATA31A7Q8IWB4 1347 aa14.2□□□□□ -0.14
SPG11-212ENST00000558790 KCNQ2O43526 872 aa14.2□□□□□ -0.14
SPG11-212ENST00000558790 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
SPG11-212ENST00000558790 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.2□□□□□ -0.14
SPG11-212ENST00000558790 SPON1Q9HCB6 807 aa14.2□□□□□ -0.14
SPG11-212ENST00000558790 WASLO00401 505 aaPredicted RBP14.19□□□□□ -0.14
SPG11-212ENST00000558790 KHSRPQ92945 711 aaKnown RBP eCLIP14.19□□□□□ -0.149e-6■■■□□ 17.9
SPG11-212ENST00000558790 GRXCR2A6NFK2 248 aa14.18□□□□□ -0.14
SPG11-212ENST00000558790 KIAA0232Q92628 1395 aa14.18□□□□□ -0.14
SPG11-212ENST00000558790 WNK3Q9BYP7 1800 aa14.18□□□□□ -0.14
SPG11-212ENST00000558790 TULP1O00294 542 aaPredicted RBP14.17□□□□□ -0.14
SPG11-212ENST00000558790 APBA3O96018 575 aa14.17□□□□□ -0.14
SPG11-212ENST00000558790 NGDNQ8NEJ9 315 aaKnown RBP14.17□□□□□ -0.14
SPG11-212ENST00000558790 DCAF11Q8TEB1 546 aa14.17□□□□□ -0.14
SPG11-212ENST00000558790 DDX12PQ92771 950 aa14.17□□□□□ -0.14
SPG11-212ENST00000558790 PRDM11Q9NQV5 511 aa14.17□□□□□ -0.14
SPG11-212ENST00000558790 PARP4Q9UKK3 1724 aaKnown RBP14.17□□□□□ -0.14
SPG11-212ENST00000558790 QRICH2Q9H0J4 1663 aa14.17□□□□□ -0.14
SPG11-212ENST00000558790 ARSIQ5FYB1 569 aa14.16□□□□□ -0.14
SPG11-212ENST00000558790 PDGFDQ9GZP0 370 aaPredicted RBP14.15□□□□□ -0.14
SPG11-212ENST00000558790 SBF2Q86WG5 1849 aa14.15□□□□□ -0.14
SPG11-212ENST00000558790 SPATA31A1Q5TZJ5 1347 aa14.15□□□□□ -0.15
SPG11-212ENST00000558790 SMYD5Q6GMV2 418 aa14.14□□□□□ -0.15
SPG11-212ENST00000558790 ZNF710Q8N1W2 664 aa14.14□□□□□ -0.15
SPG11-212ENST00000558790 POLR3AO14802 1390 aaPredicted RBP14.13□□□□□ -0.15
SPG11-212ENST00000558790 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
SPG11-212ENST00000558790 CHRNA2Q15822 529 aa14.13□□□□□ -0.15
SPG11-212ENST00000558790 SSH2Q76I76 1423 aa14.13□□□□□ -0.15
SPG11-212ENST00000558790 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
SPG11-212ENST00000558790 RGPD3A6NKT7 1758 aaPredicted RBP14.12□□□□□ -0.15
SPG11-212ENST00000558790 RGPD4Q7Z3J3 1758 aa14.12□□□□□ -0.15
SPG11-212ENST00000558790 RIMBP2O15034 1052 aa14.12□□□□□ -0.15
SPG11-212ENST00000558790 NUDT7P0C024 238 aa14.12□□□□□ -0.15
SPG11-212ENST00000558790 RBM26Q5T8P6 1007 aaKnown RBP14.12□□□□□ -0.15
SPG11-212ENST00000558790 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
SPG11-212ENST00000558790 LRRC37A3O60309 1634 aa14.12□□□□□ -0.15
SPG11-212ENST00000558790 PEAK1Q9H792 1746 aa14.11□□□□□ -0.15
SPG11-212ENST00000558790 STRN4Q9NRL3 753 aa14.11□□□□□ -0.15
SPG11-212ENST00000558790 AKAP12Q02952 1782 aa14.11□□□□□ -0.15
SPG11-212ENST00000558790 RGPD5Q99666 1765 aa14.1□□□□□ -0.15
SPG11-212ENST00000558790 NUTM2GQ5VZR2 741 aa14.1□□□□□ -0.15
SPG11-212ENST00000558790 GPR153Q6NV75 609 aa14.1□□□□□ -0.15
SPG11-212ENST00000558790 PIK3C2AO00443 1686 aa14.1□□□□□ -0.15
SPG11-212ENST00000558790 SHANK3Q9BYB0 1731 aa14.1□□□□□ -0.15
SPG11-212ENST00000558790 SNPHO15079 494 aa14.09□□□□□ -0.15
SPG11-212ENST00000558790 PTGER2P43116 358 aa14.09□□□□□ -0.15
SPG11-212ENST00000558790 ZC3H6P61129 1189 aaKnown RBP14.09□□□□□ -0.15
SPG11-212ENST00000558790 NBPF8Q3BBV2 869 aa14.09□□□□□ -0.15
SPG11-212ENST00000558790 NBPF14Q5TI25 921 aa14.09□□□□□ -0.15
SPG11-212ENST00000558790 STAC3Q96MF2 364 aa14.09□□□□□ -0.15
SPG11-212ENST00000558790 ANO8Q9HCE9 1232 aaPredicted RBP14.09□□□□□ -0.15
SPG11-212ENST00000558790 ACEP12821 1306 aa14.09□□□□□ -0.15
SPG11-212ENST00000558790 CDK19Q9BWU1 502 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms