RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 GGNBP2Q9H3C7 697 aa16.11■□□□□ 0.17
CASC4-205ENST00000558735 BTAF1O14981 1849 aa16.1■□□□□ 0.17
CASC4-205ENST00000558735 GPR162Q16538 588 aa16.1■□□□□ 0.17
CASC4-205ENST00000558735 QSER1Q2KHR3 1735 aa16.1■□□□□ 0.17
CASC4-205ENST00000558735 AMPHP49418 695 aa16.09■□□□□ 0.17
CASC4-205ENST00000558735 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
CASC4-205ENST00000558735 CLSPNQ9HAW4 1339 aa16.09■□□□□ 0.17
CASC4-205ENST00000558735 RRS1Q15050 365 aaKnown RBP16.08■□□□□ 0.16
CASC4-205ENST00000558735 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
CASC4-205ENST00000558735 LTN1O94822 1766 aa16.08■□□□□ 0.16
CASC4-205ENST00000558735 GIGYF1O75420 1035 aaPredicted RBP16.07■□□□□ 0.16
CASC4-205ENST00000558735 POLD1P28340 1107 aa16.07■□□□□ 0.16
CASC4-205ENST00000558735 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
CASC4-205ENST00000558735 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
CASC4-205ENST00000558735 PNPLA7Q6ZV29 1317 aa16.07■□□□□ 0.16
CASC4-205ENST00000558735 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
CASC4-205ENST00000558735 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
CASC4-205ENST00000558735 SHANK3Q9BYB0 1731 aa16.03■□□□□ 0.16
CASC4-205ENST00000558735 HSP90AB2PQ58FF8 381 aa16.03■□□□□ 0.16
CASC4-205ENST00000558735 GRIN3BO60391 1043 aa16.02■□□□□ 0.16
CASC4-205ENST00000558735 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
CASC4-205ENST00000558735 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.16
CASC4-205ENST00000558735 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
CASC4-205ENST00000558735 NSD2O96028 1365 aa16■□□□□ 0.15
CASC4-205ENST00000558735 PRIM1P49642 420 aaKnown RBP16■□□□□ 0.15
CASC4-205ENST00000558735 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
CASC4-205ENST00000558735 KAT6BQ8WYB5 2073 aa15.99■□□□□ 0.15
CASC4-205ENST00000558735 YBX3P16989 372 aaKnown RBP eCLIP15.99■□□□□ 0.15
CASC4-205ENST00000558735 RTL1A6NKG5 1358 aa15.99■□□□□ 0.15
CASC4-205ENST00000558735 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
CASC4-205ENST00000558735 LY75O60449 1722 aa15.98■□□□□ 0.15
CASC4-205ENST00000558735 EMILIN1Q9Y6C2 1016 aa15.98■□□□□ 0.15
CASC4-205ENST00000558735 TUBGCP6Q96RT7 1819 aa15.98■□□□□ 0.15
CASC4-205ENST00000558735 INSRP06213 1382 aa15.98■□□□□ 0.15
CASC4-205ENST00000558735 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
CASC4-205ENST00000558735 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
CASC4-205ENST00000558735 MEGF6O75095 1541 aa15.96■□□□□ 0.15
CASC4-205ENST00000558735 KCNQ4P56696 695 aa15.96■□□□□ 0.15
CASC4-205ENST00000558735 PELP1Q8IZL8 1130 aaKnown RBP15.96■□□□□ 0.15
CASC4-205ENST00000558735 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
CASC4-205ENST00000558735 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
CASC4-205ENST00000558735 RAPGEF4Q8WZA2 1011 aa15.96■□□□□ 0.15
CASC4-205ENST00000558735 POLR3GLQ9BT43 218 aa15.96■□□□□ 0.15
CASC4-205ENST00000558735 CGNL1Q0VF96 1302 aa15.95■□□□□ 0.14
CASC4-205ENST00000558735 RGPD2P0DJD1 1756 aa15.95■□□□□ 0.14
CASC4-205ENST00000558735 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
CASC4-205ENST00000558735 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
CASC4-205ENST00000558735 EIF4G2P78344 907 aaKnown RBP eCLIP15.95■□□□□ 0.14
CASC4-205ENST00000558735 COL23A1Q86Y22 540 aaPredicted RBP15.95■□□□□ 0.14
CASC4-205ENST00000558735 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
CASC4-205ENST00000558735 FLT4P35916 1363 aa15.95■□□□□ 0.14
CASC4-205ENST00000558735 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
CASC4-205ENST00000558735 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
CASC4-205ENST00000558735 TATP17735 454 aaPredicted RBP15.94■□□□□ 0.14
CASC4-205ENST00000558735 CCNL1Q9UK58 526 aaPredicted RBP15.94■□□□□ 0.14
CASC4-205ENST00000558735 ADCY9O60503 1353 aa15.93■□□□□ 0.14
CASC4-205ENST00000558735 POLKQ9UBT6 870 aa15.93■□□□□ 0.14
CASC4-205ENST00000558735 DOT1LQ8TEK3 1739 aa15.93■□□□□ 0.14
CASC4-205ENST00000558735 ATP10DQ9P241 1426 aa15.93■□□□□ 0.14
CASC4-205ENST00000558735 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
CASC4-205ENST00000558735 SMG6Q86US8 1419 aaKnown RBP15.92■□□□□ 0.14
CASC4-205ENST00000558735 CYP27B1O15528 508 aa15.91■□□□□ 0.14
CASC4-205ENST00000558735 FLAD1Q8NFF5 587 aa15.91■□□□□ 0.14
CASC4-205ENST00000558735 PANK3Q9H999 370 aa15.91■□□□□ 0.14
CASC4-205ENST00000558735 EYA1Q99502 592 aa15.9■□□□□ 0.14
CASC4-205ENST00000558735 HSPA6P17066 643 aa15.88■□□□□ 0.13
CASC4-205ENST00000558735 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
CASC4-205ENST00000558735 GPBP1L1Q9HC44 474 aaPredicted RBP15.88■□□□□ 0.13
CASC4-205ENST00000558735 KIF20BQ96Q89 1820 aa15.88■□□□□ 0.13
CASC4-205ENST00000558735 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
CASC4-205ENST00000558735 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
CASC4-205ENST00000558735 MSH5O43196 834 aa15.87■□□□□ 0.13
CASC4-205ENST00000558735 NKX1-1Q15270 411 aaPredicted RBP15.86■□□□□ 0.13
CASC4-205ENST00000558735 MSL1Q68DK7 614 aa15.86■□□□□ 0.13
CASC4-205ENST00000558735 MPRIPQ6WCQ1 1025 aa15.86■□□□□ 0.13
CASC4-205ENST00000558735 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
CASC4-205ENST00000558735 C5P01031 1676 aa15.85■□□□□ 0.13
CASC4-205ENST00000558735 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
CASC4-205ENST00000558735 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.84■□□□□ 0.137e-6■■□□□ 12.8
CASC4-205ENST00000558735 SPG7Q9UQ90 795 aa15.84■□□□□ 0.13
CASC4-205ENST00000558735 MAP2P11137 1827 aaKnown RBP15.83■□□□□ 0.12
CASC4-205ENST00000558735 PIGBQ92521 554 aa15.83■□□□□ 0.12
CASC4-205ENST00000558735 PALLDQ8WX93 1383 aa15.83■□□□□ 0.12
CASC4-205ENST00000558735 SMARCC1Q92922 1105 aaPredicted RBP15.82■□□□□ 0.12
CASC4-205ENST00000558735 TAF1LQ8IZX4 1826 aa15.81■□□□□ 0.12
CASC4-205ENST00000558735 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
CASC4-205ENST00000558735 MORC1Q86VD1 984 aa15.8■□□□□ 0.12
CASC4-205ENST00000558735 AMIGO3Q86WK7 504 aa15.8■□□□□ 0.12
CASC4-205ENST00000558735 IFNL2Q8IZJ0 200 aa15.8■□□□□ 0.12
CASC4-205ENST00000558735 C4BP0C0L5 1744 aa15.8■□□□□ 0.12
CASC4-205ENST00000558735 KIF3CO14782 793 aa15.79■□□□□ 0.12
CASC4-205ENST00000558735 PHKG2P15735 406 aa15.79■□□□□ 0.12
CASC4-205ENST00000558735 TOGARAM1Q9Y4F4 1720 aa15.79■□□□□ 0.12
CASC4-205ENST00000558735 CICQ96RK0 1608 aaPredicted RBP15.79■□□□□ 0.12
CASC4-205ENST00000558735 SSFA2P28290 1259 aa15.78■□□□□ 0.12
CASC4-205ENST00000558735 AK7Q96M32 723 aa15.78■□□□□ 0.12
CASC4-205ENST00000558735 KNSTRNQ9Y448 316 aa15.78■□□□□ 0.12
CASC4-205ENST00000558735 ANKRD26Q9UPS8 1709 aa15.77■□□□□ 0.12
CASC4-205ENST00000558735 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.77■□□□□ 0.12
CASC4-205ENST00000558735 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms