RNA–Protein interactions for RNA: ENST00000558659.5

CCDC33-205, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-205ENST00000558659 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
CCDC33-205ENST00000558659 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
CCDC33-205ENST00000558659 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
CCDC33-205ENST00000558659 VPS72Q15906 364 aa16.54■□□□□ 0.24
CCDC33-205ENST00000558659 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
CCDC33-205ENST00000558659 RIPK4P57078 832 aa16.54■□□□□ 0.24
CCDC33-205ENST00000558659 IL2RBP14784 551 aa16.53■□□□□ 0.24
CCDC33-205ENST00000558659 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
CCDC33-205ENST00000558659 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
CCDC33-205ENST00000558659 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
CCDC33-205ENST00000558659 NFE2L2Q16236 605 aa16.52■□□□□ 0.23
CCDC33-205ENST00000558659 NWD2Q9ULI1 1742 aa16.52■□□□□ 0.23
CCDC33-205ENST00000558659 CYP27B1O15528 508 aa16.51■□□□□ 0.23
CCDC33-205ENST00000558659 MCM10Q7L590 875 aa16.51■□□□□ 0.23
CCDC33-205ENST00000558659 GJD4Q96KN9 370 aaPredicted RBP16.51■□□□□ 0.23
CCDC33-205ENST00000558659 DDX54Q8TDD1 881 aaKnown RBP16.51■□□□□ 0.23
CCDC33-205ENST00000558659 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
CCDC33-205ENST00000558659 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
CCDC33-205ENST00000558659 ZNF530Q6P9A1 599 aaPredicted RBP16.5■□□□□ 0.23
CCDC33-205ENST00000558659 PNNQ9H307 717 aaKnown RBP16.5■□□□□ 0.23
CCDC33-205ENST00000558659 NEFMP07197 916 aa16.49■□□□□ 0.23
CCDC33-205ENST00000558659 WWC1Q8IX03 1113 aa16.49■□□□□ 0.23
CCDC33-205ENST00000558659 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
CCDC33-205ENST00000558659 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
CCDC33-205ENST00000558659 PLEKHO1Q53GL0 409 aaPredicted RBP16.49■□□□□ 0.23
CCDC33-205ENST00000558659 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
CCDC33-205ENST00000558659 DISP2A7MBM2 1401 aa16.49■□□□□ 0.23
CCDC33-205ENST00000558659 A0A0G2JS52 829 aa16.48■□□□□ 0.23
CCDC33-205ENST00000558659 FAM182BQ5T319 152 aa16.48■□□□□ 0.23
CCDC33-205ENST00000558659 POTEAQ6S8J7 498 aa16.48■□□□□ 0.23
CCDC33-205ENST00000558659 ZCRB1Q8TBF4 217 aaKnown RBP16.48■□□□□ 0.23
CCDC33-205ENST00000558659 OVOS2A0A0G2JMS6 1433 aa16.48■□□□□ 0.23
CCDC33-205ENST00000558659 ATRNO75882 1429 aa16.48■□□□□ 0.23
CCDC33-205ENST00000558659 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
CCDC33-205ENST00000558659 GLI3P10071 1580 aa16.47■□□□□ 0.23
CCDC33-205ENST00000558659 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
CCDC33-205ENST00000558659 ZNF521Q96K83 1311 aa16.46■□□□□ 0.23
CCDC33-205ENST00000558659 PHKG2P15735 406 aa16.46■□□□□ 0.23
CCDC33-205ENST00000558659 AMOTQ4VCS5 1084 aa16.46■□□□□ 0.23
CCDC33-205ENST00000558659 BARGINQ6ZT62 677 aa16.46■□□□□ 0.23
CCDC33-205ENST00000558659 GAS2L2Q8NHY3 880 aa16.46■□□□□ 0.23
CCDC33-205ENST00000558659 THRAP3Q9Y2W1 955 aaKnown RBP16.45■□□□□ 0.22
CCDC33-205ENST00000558659 GNAT3A8MTJ3 354 aa16.45■□□□□ 0.22
CCDC33-205ENST00000558659 EXOC5O00471 708 aa16.45■□□□□ 0.22
CCDC33-205ENST00000558659 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
CCDC33-205ENST00000558659 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
CCDC33-205ENST00000558659 ZBED9Q6R2W3 1325 aa16.44■□□□□ 0.22
CCDC33-205ENST00000558659 DDB1Q16531 1140 aa16.44■□□□□ 0.22
CCDC33-205ENST00000558659 DLG5Q8TDM6 1919 aa16.44■□□□□ 0.22
CCDC33-205ENST00000558659 AKAP4Q5JQC9 854 aa16.43■□□□□ 0.22
CCDC33-205ENST00000558659 ZNF772Q68DY9 489 aaPredicted RBP16.43■□□□□ 0.22
CCDC33-205ENST00000558659 MARCH10Q8NA82 808 aaPredicted RBP16.43■□□□□ 0.22
CCDC33-205ENST00000558659 C1orf141Q5JVX7 400 aa16.43■□□□□ 0.22
CCDC33-205ENST00000558659 SEPT12Q8IYM1 358 aa16.43■□□□□ 0.22
CCDC33-205ENST00000558659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC33-205ENST00000558659 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.43■□□□□ 0.22
CCDC33-205ENST00000558659 MAP3K5Q99683 1374 aa16.42■□□□□ 0.22
CCDC33-205ENST00000558659 IFNL2Q8IZJ0 200 aa16.42■□□□□ 0.22
CCDC33-205ENST00000558659 LAS1LQ9Y4W2 734 aaKnown RBP16.42■□□□□ 0.22
CCDC33-205ENST00000558659 CCDC27Q2M243 656 aa16.41■□□□□ 0.22
CCDC33-205ENST00000558659 RTF1Q92541 710 aaKnown RBP16.41■□□□□ 0.22
CCDC33-205ENST00000558659 KDM6AO15550 1401 aaPredicted RBP16.41■□□□□ 0.22
CCDC33-205ENST00000558659 ONECUT3O60422 494 aaPredicted RBP16.4■□□□□ 0.22
CCDC33-205ENST00000558659 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
CCDC33-205ENST00000558659 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
CCDC33-205ENST00000558659 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
CCDC33-205ENST00000558659 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
CCDC33-205ENST00000558659 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
CCDC33-205ENST00000558659 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
CCDC33-205ENST00000558659 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.21
CCDC33-205ENST00000558659 PTF1AQ7RTS3 328 aa16.39■□□□□ 0.21
CCDC33-205ENST00000558659 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
CCDC33-205ENST00000558659 RXRBP28702 533 aa16.38■□□□□ 0.21
CCDC33-205ENST00000558659 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
CCDC33-205ENST00000558659 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
CCDC33-205ENST00000558659 ACSBG1Q96GR2 724 aa16.38■□□□□ 0.21
CCDC33-205ENST00000558659 CDCA7Q9BWT1 371 aaPredicted RBP16.38■□□□□ 0.21
CCDC33-205ENST00000558659 TNS2Q63HR2 1409 aa16.37■□□□□ 0.21
CCDC33-205ENST00000558659 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
CCDC33-205ENST00000558659 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
CCDC33-205ENST00000558659 KCNQ3O43525 872 aa16.37■□□□□ 0.21
CCDC33-205ENST00000558659 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
CCDC33-205ENST00000558659 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
CCDC33-205ENST00000558659 CEMIPQ8WUJ3 1361 aa16.36■□□□□ 0.21
CCDC33-205ENST00000558659 PDE3BQ13370 1112 aa16.36■□□□□ 0.21
CCDC33-205ENST00000558659 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
CCDC33-205ENST00000558659 KCNQ2O43526 872 aa16.36■□□□□ 0.21
CCDC33-205ENST00000558659 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
CCDC33-205ENST00000558659 WDR63Q8IWG1 891 aa16.36■□□□□ 0.21
CCDC33-205ENST00000558659 DCAF5Q96JK2 942 aa16.36■□□□□ 0.21
CCDC33-205ENST00000558659 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
CCDC33-205ENST00000558659 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
CCDC33-205ENST00000558659 SLC39A6Q13433 755 aa16.35■□□□□ 0.21
CCDC33-205ENST00000558659 DUSP27Q5VZP5 1158 aa16.35■□□□□ 0.21
CCDC33-205ENST00000558659 THSD7AQ9UPZ6 1657 aa16.35■□□□□ 0.21
CCDC33-205ENST00000558659 SYTL4Q96C24 671 aaPredicted RBP16.34■□□□□ 0.21
CCDC33-205ENST00000558659 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
CCDC33-205ENST00000558659 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
CCDC33-205ENST00000558659 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
CCDC33-205ENST00000558659 TEFQ10587 303 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms