RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 BAG6P46379 1132 aa21.41■■□□□ 1.02
RABGGTA-206ENST00000558649 DOT1LQ8TEK3 1739 aa21.41■■□□□ 1.02
RABGGTA-206ENST00000558649 NHSQ6T4R5 1651 aa21.4■■□□□ 1.02
RABGGTA-206ENST00000558649 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
RABGGTA-206ENST00000558649 APBA3O96018 575 aa21.39■■□□□ 1.01
RABGGTA-206ENST00000558649 PPP2R1AP30153 589 aa21.39■■□□□ 1.01
RABGGTA-206ENST00000558649 IL13P35225 146 aa21.39■■□□□ 1.01
RABGGTA-206ENST00000558649 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.01
RABGGTA-206ENST00000558649 ZNF316A6NFI3 1004 aaPredicted RBP21.38■■□□□ 1.01
RABGGTA-206ENST00000558649 DIAPH1O60610 1272 aaKnown RBP21.38■■□□□ 1.01
RABGGTA-206ENST00000558649 EN1Q05925 392 aaPredicted RBP21.38■■□□□ 1.01
RABGGTA-206ENST00000558649 AEBP1Q8IUX7 1158 aa21.38■■□□□ 1.01
RABGGTA-206ENST00000558649 BCL9O00512 1426 aa21.38■■□□□ 1.01
RABGGTA-206ENST00000558649 PARD3Q8TEW0 1356 aa21.37■■□□□ 1.01
RABGGTA-206ENST00000558649 PCDH11XQ9BZA7 1347 aa21.37■■□□□ 1.01
RABGGTA-206ENST00000558649 PCDH11YQ9BZA8 1340 aa21.37■■□□□ 1.01
RABGGTA-206ENST00000558649 PTF1AQ7RTS3 328 aa21.37■■□□□ 1.01
RABGGTA-206ENST00000558649 SULT6B1Q6IMI4 303 aa21.36■■□□□ 1.01
RABGGTA-206ENST00000558649 CFAP53Q96M91 514 aa21.36■■□□□ 1.01
RABGGTA-206ENST00000558649 KAT6BQ8WYB5 2073 aa21.35■■□□□ 1.01
RABGGTA-206ENST00000558649 KCNQ2O43526 872 aa21.35■■□□□ 1.01
RABGGTA-206ENST00000558649 SPG7Q9UQ90 795 aa21.35■■□□□ 1.01
RABGGTA-206ENST00000558649 BTAF1O14981 1849 aa21.34■■□□□ 1.01
RABGGTA-206ENST00000558649 U2SURPO15042 1029 aaKnown RBP21.34■■□□□ 1.01
RABGGTA-206ENST00000558649 HMOX1P09601 288 aa21.34■■□□□ 1.01
RABGGTA-206ENST00000558649 BCL11BQ9C0K0 894 aaPredicted RBP21.34■■□□□ 1.01
RABGGTA-206ENST00000558649 EZH2Q15910 746 aaKnown RBP21.33■■□□□ 1.01
RABGGTA-206ENST00000558649 SYTL4Q96C24 671 aaPredicted RBP21.33■■□□□ 1.01
RABGGTA-206ENST00000558649 CYP27B1O15528 508 aa21.32■■□□□ 1
RABGGTA-206ENST00000558649 TOGARAM1Q9Y4F4 1720 aa21.32■■□□□ 1
RABGGTA-206ENST00000558649 RREB1Q92766 1687 aa21.31■■□□□ 1
RABGGTA-206ENST00000558649 KDRP35968 1356 aa21.31■■□□□ 1
RABGGTA-206ENST00000558649 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
RABGGTA-206ENST00000558649 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
RABGGTA-206ENST00000558649 RALBP1Q15311 655 aa21.29■■□□□ 1
RABGGTA-206ENST00000558649 NUP188Q5SRE5 1749 aa21.29■■□□□ 1
RABGGTA-206ENST00000558649 PRIM1P49642 420 aaKnown RBP21.28■■□□□ 1
RABGGTA-206ENST00000558649 PLEKHO1Q53GL0 409 aaPredicted RBP21.28■■□□□ 1
RABGGTA-206ENST00000558649 CAMKK2Q96RR4 588 aa21.28■■□□□ 1
RABGGTA-206ENST00000558649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.28■■□□□ 14e-7■□□□□ 10.5
RABGGTA-206ENST00000558649 ZNF530Q6P9A1 599 aaPredicted RBP21.27■■□□□ 1
RABGGTA-206ENST00000558649 ITGB4P16144 1822 aa21.27■□□□□ 0.99
RABGGTA-206ENST00000558649 PLEKHG2Q9H7P9 1386 aa21.26■□□□□ 0.99
RABGGTA-206ENST00000558649 PHKG2P15735 406 aa21.26■□□□□ 0.99
RABGGTA-206ENST00000558649 IFNL2Q8IZJ0 200 aa21.26■□□□□ 0.99
RABGGTA-206ENST00000558649 AMOTQ4VCS5 1084 aa21.25■□□□□ 0.99
RABGGTA-206ENST00000558649 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
RABGGTA-206ENST00000558649 MYBBP1AQ9BQG0 1328 aaKnown RBP21.24■□□□□ 0.99
RABGGTA-206ENST00000558649 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
RABGGTA-206ENST00000558649 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
RABGGTA-206ENST00000558649 C1orf141Q5JVX7 400 aa21.23■□□□□ 0.99
RABGGTA-206ENST00000558649 PLSCR1O15162 318 aa21.22■□□□□ 0.99
RABGGTA-206ENST00000558649 MPRIPQ6WCQ1 1025 aa21.22■□□□□ 0.99
RABGGTA-206ENST00000558649 NKX1-1Q15270 411 aaPredicted RBP21.21■□□□□ 0.99
RABGGTA-206ENST00000558649 VIRMAQ69YN4 1812 aaKnown RBP21.2■□□□□ 0.98
RABGGTA-206ENST00000558649 PRKRIP1Q9H875 184 aaPredicted RBP21.2■□□□□ 0.98
RABGGTA-206ENST00000558649 PRKAR2BP31323 418 aa21.19■□□□□ 0.98
RABGGTA-206ENST00000558649 LY75O60449 1722 aa21.18■□□□□ 0.98
RABGGTA-206ENST00000558649 HSP90AB1P08238 724 aaKnown RBP21.18■□□□□ 0.98
RABGGTA-206ENST00000558649 TXNRD1Q16881 649 aa21.18■□□□□ 0.98
RABGGTA-206ENST00000558649 KDM6AO15550 1401 aaPredicted RBP21.18■□□□□ 0.98
RABGGTA-206ENST00000558649 SCN11AQ9UI33 1791 aa21.18■□□□□ 0.98
RABGGTA-206ENST00000558649 PSDA5PKW4 1024 aaPredicted RBP21.17■□□□□ 0.98
RABGGTA-206ENST00000558649 MTHFSDQ2M296 383 aaKnown RBP21.17■□□□□ 0.98
RABGGTA-206ENST00000558649 PROM2Q8N271 834 aa21.17■□□□□ 0.98
RABGGTA-206ENST00000558649 RSPH6AQ9H0K4 717 aa21.17■□□□□ 0.98
RABGGTA-206ENST00000558649 TMOD3Q9NYL9 352 aa21.17■□□□□ 0.98
RABGGTA-206ENST00000558649 DCAF5Q96JK2 942 aa21.16■□□□□ 0.98
RABGGTA-206ENST00000558649 R3HDM1Q15032 1099 aaKnown RBP21.15■□□□□ 0.98
RABGGTA-206ENST00000558649 AKAP4Q5JQC9 854 aa21.15■□□□□ 0.98
RABGGTA-206ENST00000558649 NBPF14Q5TI25 921 aa21.14■□□□□ 0.97
RABGGTA-206ENST00000558649 PIGBQ92521 554 aa21.14■□□□□ 0.97
RABGGTA-206ENST00000558649 KCNQ4P56696 695 aa21.13■□□□□ 0.97
RABGGTA-206ENST00000558649 PHACTR3Q96KR7 559 aa21.13■□□□□ 0.97
RABGGTA-206ENST00000558649 PALLDQ8WX93 1383 aa21.12■□□□□ 0.97
RABGGTA-206ENST00000558649 FCHSD2O94868 740 aa21.12■□□□□ 0.97
RABGGTA-206ENST00000558649 CABP4P57796 275 aa21.12■□□□□ 0.97
RABGGTA-206ENST00000558649 PAPPAQ13219 1627 aa21.11■□□□□ 0.97
RABGGTA-206ENST00000558649 ERVV-2B6SEH9 535 aa21.11■□□□□ 0.97
RABGGTA-206ENST00000558649 GAS2L2Q8NHY3 880 aa21.11■□□□□ 0.97
RABGGTA-206ENST00000558649 ANO8Q9HCE9 1232 aaPredicted RBP21.11■□□□□ 0.97
RABGGTA-206ENST00000558649 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
RABGGTA-206ENST00000558649 LRRC4BQ9NT99 713 aa21.1■□□□□ 0.97
RABGGTA-206ENST00000558649 CCNL1Q9UK58 526 aaPredicted RBP21.1■□□□□ 0.97
RABGGTA-206ENST00000558649 C5P01031 1676 aa21.09■□□□□ 0.97
RABGGTA-206ENST00000558649 ANP32CO43423 234 aa21.09■□□□□ 0.97
RABGGTA-206ENST00000558649 LGR6Q9HBX8 967 aa21.09■□□□□ 0.97
RABGGTA-206ENST00000558649 ASAP1Q9ULH1 1129 aa21.09■□□□□ 0.97
RABGGTA-206ENST00000558649 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
RABGGTA-206ENST00000558649 RNMTO43148 476 aaKnown RBP21.08■□□□□ 0.97
RABGGTA-206ENST00000558649 NEFMP07197 916 aa21.08■□□□□ 0.97
RABGGTA-206ENST00000558649 SLC27A3Q5K4L6 730 aa21.08■□□□□ 0.97
RABGGTA-206ENST00000558649 SMARCC1Q92922 1105 aaPredicted RBP21.08■□□□□ 0.97
RABGGTA-206ENST00000558649 GNAT3A8MTJ3 354 aa21.07■□□□□ 0.96
RABGGTA-206ENST00000558649 WDR43Q15061 677 aaKnown RBP eCLIP21.07■□□□□ 0.96
RABGGTA-206ENST00000558649 NFATC2IPQ8NCF5 419 aa21.07■□□□□ 0.96
RABGGTA-206ENST00000558649 STK32BQ9NY57 414 aa21.07■□□□□ 0.96
RABGGTA-206ENST00000558649 TAF1LQ8IZX4 1826 aa21.06■□□□□ 0.96
RABGGTA-206ENST00000558649 MRC1P22897 1456 aa21.06■□□□□ 0.96
RABGGTA-206ENST00000558649 DLG5Q8TDM6 1919 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms