RNA–Protein interactions for RNA: ENST00000558488.1

RNF213-206, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-206ENST00000558488 RGPD2P0DJD1 1756 aa23.87■■□□□ 1.41
RNF213-206ENST00000558488 FAM98CQ17RN3 349 aaKnown RBP23.86■■□□□ 1.41
RNF213-206ENST00000558488 THRAP3Q9Y2W1 955 aaKnown RBP23.86■■□□□ 1.41
RNF213-206ENST00000558488 FAM9BQ8IZU0 186 aa23.85■■□□□ 1.41
RNF213-206ENST00000558488 SPATA31A1Q5TZJ5 1347 aa23.84■■□□□ 1.41
RNF213-206ENST00000558488 SPATA31A5Q5VU36 1347 aa23.84■■□□□ 1.41
RNF213-206ENST00000558488 SPATA31A7Q8IWB4 1347 aa23.84■■□□□ 1.41
RNF213-206ENST00000558488 A0A0G2JS52 829 aa23.83■■□□□ 1.41
RNF213-206ENST00000558488 HMOX1P09601 288 aa23.83■■□□□ 1.41
RNF213-206ENST00000558488 MYT1Q01538 1121 aa23.83■■□□□ 1.41
RNF213-206ENST00000558488 AEBP1Q8IUX7 1158 aa23.83■■□□□ 1.41
RNF213-206ENST00000558488 DISP2A7MBM2 1401 aa23.82■■□□□ 1.4
RNF213-206ENST00000558488 PARP4Q9UKK3 1724 aaKnown RBP23.81■■□□□ 1.4
RNF213-206ENST00000558488 NEFMP07197 916 aa23.81■■□□□ 1.4
RNF213-206ENST00000558488 PRKAR2BP31323 418 aa23.81■■□□□ 1.4
RNF213-206ENST00000558488 TCP11L2Q8N4U5 519 aa23.81■■□□□ 1.4
RNF213-206ENST00000558488 USHBP1Q8N6Y0 703 aa23.81■■□□□ 1.4
RNF213-206ENST00000558488 RUNDC1Q96C34 613 aa23.81■■□□□ 1.4
RNF213-206ENST00000558488 PLEKHF1Q96S99 279 aa23.81■■□□□ 1.4
RNF213-206ENST00000558488 WNK3Q9BYP7 1800 aa23.81■■□□□ 1.4
RNF213-206ENST00000558488 EZH2Q15910 746 aaKnown RBP23.8■■□□□ 1.4
RNF213-206ENST00000558488 BARGINQ6ZT62 677 aa23.8■■□□□ 1.4
RNF213-206ENST00000558488 RAPGEF4Q8WZA2 1011 aa23.8■■□□□ 1.4
RNF213-206ENST00000558488 CDCA7Q9BWT1 371 aaPredicted RBP23.8■■□□□ 1.4
RNF213-206ENST00000558488 THSD7AQ9UPZ6 1657 aa23.79■■□□□ 1.4
RNF213-206ENST00000558488 OVOS2A0A0G2JMS6 1433 aa23.79■■□□□ 1.4
RNF213-206ENST00000558488 MAPK8IP3Q9UPT6 1336 aa23.79■■□□□ 1.4
RNF213-206ENST00000558488 MEGF6O75095 1541 aa23.79■■□□□ 1.4
RNF213-206ENST00000558488 IL2RBP14784 551 aa23.78■■□□□ 1.4
RNF213-206ENST00000558488 TATP17735 454 aaPredicted RBP23.78■■□□□ 1.4
RNF213-206ENST00000558488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.78■■□□□ 1.4
RNF213-206ENST00000558488 PKD1L3Q7Z443 1732 aa23.76■■□□□ 1.39
RNF213-206ENST00000558488 YY1P25490 414 aa23.76■■□□□ 1.39
RNF213-206ENST00000558488 AMOTQ4VCS5 1084 aa23.76■■□□□ 1.39
RNF213-206ENST00000558488 NCBP3Q53F19 620 aaKnown RBP23.75■■□□□ 1.39
RNF213-206ENST00000558488 NGEFQ8N5V2 710 aa23.75■■□□□ 1.39
RNF213-206ENST00000558488 USP35Q9P2H5 1018 aa23.74■■□□□ 1.39
RNF213-206ENST00000558488 PLEKHO1Q53GL0 409 aaPredicted RBP23.73■■□□□ 1.39
RNF213-206ENST00000558488 CCDC146Q8IYE0 955 aa23.73■■□□□ 1.39
RNF213-206ENST00000558488 GAS2L2Q8NHY3 880 aa23.73■■□□□ 1.39
RNF213-206ENST00000558488 CAMKK2Q96RR4 588 aa23.73■■□□□ 1.39
RNF213-206ENST00000558488 RREB1Q92766 1687 aa23.73■■□□□ 1.39
RNF213-206ENST00000558488 NUP188Q5SRE5 1749 aa23.72■■□□□ 1.39
RNF213-206ENST00000558488 TNS2Q63HR2 1409 aa23.71■■□□□ 1.39
RNF213-206ENST00000558488 SPG7Q9UQ90 795 aa23.71■■□□□ 1.39
RNF213-206ENST00000558488 NFE2L2Q16236 605 aa23.7■■□□□ 1.38
RNF213-206ENST00000558488 PHACTR3Q96KR7 559 aa23.7■■□□□ 1.38
RNF213-206ENST00000558488 LRRC37A3O60309 1634 aa23.7■■□□□ 1.38
RNF213-206ENST00000558488 UTRNP46939 3433 aa23.68■■□□□ 1.38
RNF213-206ENST00000558488 TRIM37O94972 964 aa23.68■■□□□ 1.38
RNF213-206ENST00000558488 PCDH11XQ9BZA7 1347 aa23.67■■□□□ 1.38
RNF213-206ENST00000558488 PCDH11YQ9BZA8 1340 aa23.67■■□□□ 1.38
RNF213-206ENST00000558488 APAF1O14727 1248 aa23.67■■□□□ 1.38
RNF213-206ENST00000558488 TMPOP42166 694 aaKnown RBP23.67■■□□□ 1.38
RNF213-206ENST00000558488 MTHFSDQ2M296 383 aaKnown RBP23.67■■□□□ 1.38
RNF213-206ENST00000558488 ZCRB1Q8TBF4 217 aaKnown RBP23.67■■□□□ 1.38
RNF213-206ENST00000558488 SHANK3Q9BYB0 1731 aa23.65■■□□□ 1.38
RNF213-206ENST00000558488 LMOD3Q0VAK6 560 aa23.65■■□□□ 1.38
RNF213-206ENST00000558488 CCDC27Q2M243 656 aa23.65■■□□□ 1.38
RNF213-206ENST00000558488 HTATSF1O43719 755 aaKnown RBP23.64■■□□□ 1.37
RNF213-206ENST00000558488 AKAP4Q5JQC9 854 aa23.64■■□□□ 1.37
RNF213-206ENST00000558488 ZNF530Q6P9A1 599 aaPredicted RBP23.64■■□□□ 1.37
RNF213-206ENST00000558488 MAP3K5Q99683 1374 aa23.64■■□□□ 1.37
RNF213-206ENST00000558488 EXOC5O00471 708 aa23.63■■□□□ 1.37
RNF213-206ENST00000558488 DDB1Q16531 1140 aa23.63■■□□□ 1.37
RNF213-206ENST00000558488 C1orf141Q5JVX7 400 aa23.63■■□□□ 1.37
RNF213-206ENST00000558488 IFNL2Q8IZJ0 200 aa23.62■■□□□ 1.37
RNF213-206ENST00000558488 ADAMTS7Q9UKP4 1686 aa23.61■■□□□ 1.37
RNF213-206ENST00000558488 HSP90AB1P08238 724 aaKnown RBP23.61■■□□□ 1.37
RNF213-206ENST00000558488 RIPK4P57078 832 aa23.61■■□□□ 1.37
RNF213-206ENST00000558488 GNAT3A8MTJ3 354 aa23.6■■□□□ 1.37
RNF213-206ENST00000558488 APBA3O96018 575 aa23.6■■□□□ 1.37
RNF213-206ENST00000558488 PHKG2P15735 406 aa23.6■■□□□ 1.37
RNF213-206ENST00000558488 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
RNF213-206ENST00000558488 CYP27B1O15528 508 aa23.59■■□□□ 1.37
RNF213-206ENST00000558488 NKX1-1Q15270 411 aaPredicted RBP23.59■■□□□ 1.37
RNF213-206ENST00000558488 DLG5Q8TDM6 1919 aa23.58■■□□□ 1.37
RNF213-206ENST00000558488 ZBED9Q6R2W3 1325 aa23.58■■□□□ 1.36
RNF213-206ENST00000558488 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
RNF213-206ENST00000558488 RRP7AQ9Y3A4 280 aaKnown RBP23.57■■□□□ 1.36
RNF213-206ENST00000558488 TRIM35Q9UPQ4 493 aa23.56■■□□□ 1.36
RNF213-206ENST00000558488 ZNF521Q96K83 1311 aa23.56■■□□□ 1.36
RNF213-206ENST00000558488 CEMIPQ8WUJ3 1361 aa23.55■■□□□ 1.36
RNF213-206ENST00000558488 DCAF5Q96JK2 942 aa23.55■■□□□ 1.36
RNF213-206ENST00000558488 BCL9O00512 1426 aa23.55■■□□□ 1.36
RNF213-206ENST00000558488 KDM6AO15550 1401 aaPredicted RBP23.54■■□□□ 1.36
RNF213-206ENST00000558488 CALD1Q05682 793 aaKnown RBP23.54■■□□□ 1.36
RNF213-206ENST00000558488 NEUROD2Q15784 382 aa23.54■■□□□ 1.36
RNF213-206ENST00000558488 FAM196AQ6ZSG2 479 aa23.54■■□□□ 1.36
RNF213-206ENST00000558488 WWC1Q8IX03 1113 aa23.54■■□□□ 1.36
RNF213-206ENST00000558488 MRC1P22897 1456 aa23.54■■□□□ 1.36
RNF213-206ENST00000558488 PDE3BQ13370 1112 aa23.53■■□□□ 1.36
RNF213-206ENST00000558488 DDX54Q8TDD1 881 aaKnown RBP23.53■■□□□ 1.36
RNF213-206ENST00000558488 WDR63Q8IWG1 891 aa23.52■■□□□ 1.36
RNF213-206ENST00000558488 SCN11AQ9UI33 1791 aa23.51■■□□□ 1.35
RNF213-206ENST00000558488 RNMTO43148 476 aaKnown RBP23.51■■□□□ 1.35
RNF213-206ENST00000558488 MARCH10Q8NA82 808 aaPredicted RBP23.51■■□□□ 1.35
RNF213-206ENST00000558488 IL16Q14005 1332 aa23.51■■□□□ 1.35
RNF213-206ENST00000558488 IL17REQ8NFR9 667 aa23.5■■□□□ 1.35
RNF213-206ENST00000558488 CASZ1Q86V15 1759 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms