RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 KCNQ4P56696 695 aa21.55■■□□□ 1.04
TPM1-211ENST00000558314 MEGF6O75095 1541 aa21.55■■□□□ 1.04
TPM1-211ENST00000558314 CCER1Q8TC90 406 aaPredicted RBP21.54■■□□□ 1.04
TPM1-211ENST00000558314 CASZ1Q86V15 1759 aa21.53■■□□□ 1.04
TPM1-211ENST00000558314 KIF20BQ96Q89 1820 aa21.53■■□□□ 1.04
TPM1-211ENST00000558314 TATP17735 454 aaPredicted RBP21.53■■□□□ 1.04
TPM1-211ENST00000558314 ZNF827Q17R98 1081 aa21.53■■□□□ 1.04
TPM1-211ENST00000558314 LRRC4BQ9NT99 713 aa21.53■■□□□ 1.04
TPM1-211ENST00000558314 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
TPM1-211ENST00000558314 FLT4P35916 1363 aa21.51■■□□□ 1.03
TPM1-211ENST00000558314 CLSPNQ9HAW4 1339 aa21.51■■□□□ 1.03
TPM1-211ENST00000558314 PTGER2P43116 358 aa21.5■■□□□ 1.03
TPM1-211ENST00000558314 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
TPM1-211ENST00000558314 MTFR1LQ9H019 292 aa21.5■■□□□ 1.03
TPM1-211ENST00000558314 INSRP06213 1382 aa21.49■■□□□ 1.03
TPM1-211ENST00000558314 YY1P25490 414 aa21.49■■□□□ 1.03
TPM1-211ENST00000558314 MYOM1P52179 1685 aa21.49■■□□□ 1.03
TPM1-211ENST00000558314 DOT1LQ8TEK3 1739 aa21.48■■□□□ 1.03
TPM1-211ENST00000558314 SLC27A3Q5K4L6 730 aa21.47■■□□□ 1.03
TPM1-211ENST00000558314 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
TPM1-211ENST00000558314 TFCP2L1Q9NZI6 479 aa21.47■■□□□ 1.03
TPM1-211ENST00000558314 CGNL1Q0VF96 1302 aa21.47■■□□□ 1.03
TPM1-211ENST00000558314 HSPA5P11021 654 aaKnown RBP21.46■■□□□ 1.03
TPM1-211ENST00000558314 EIF4G2P78344 907 aaKnown RBP eCLIP21.46■■□□□ 1.03
TPM1-211ENST00000558314 FHDC1Q9C0D6 1143 aaPredicted RBP21.46■■□□□ 1.03
TPM1-211ENST00000558314 CCNL1Q9UK58 526 aaPredicted RBP21.46■■□□□ 1.03
TPM1-211ENST00000558314 MSH5O43196 834 aa21.45■■□□□ 1.02
TPM1-211ENST00000558314 AKT1S1Q96B36 256 aa21.44■■□□□ 1.02
TPM1-211ENST00000558314 PCDH11XQ9BZA7 1347 aa21.44■■□□□ 1.02
TPM1-211ENST00000558314 PCDH11YQ9BZA8 1340 aa21.44■■□□□ 1.02
TPM1-211ENST00000558314 PAPPAQ13219 1627 aa21.44■■□□□ 1.02
TPM1-211ENST00000558314 SHANK3Q9BYB0 1731 aa21.43■■□□□ 1.02
TPM1-211ENST00000558314 MPRIPQ6WCQ1 1025 aa21.43■■□□□ 1.02
TPM1-211ENST00000558314 ARXQ96QS3 562 aa21.43■■□□□ 1.02
TPM1-211ENST00000558314 NSD2O96028 1365 aa21.43■■□□□ 1.02
TPM1-211ENST00000558314 SYT17Q9BSW7 474 aa21.42■■□□□ 1.02
TPM1-211ENST00000558314 KIF24Q5T7B8 1368 aa21.41■■□□□ 1.02
TPM1-211ENST00000558314 PNPLA7Q6ZV29 1317 aa21.4■■□□□ 1.02
TPM1-211ENST00000558314 CYP27B1O15528 508 aa21.39■■□□□ 1.01
TPM1-211ENST00000558314 POLD1P28340 1107 aa21.39■■□□□ 1.01
TPM1-211ENST00000558314 SGIP1Q9BQI5 828 aa21.39■■□□□ 1.01
TPM1-211ENST00000558314 EYA1Q99502 592 aa21.38■■□□□ 1.01
TPM1-211ENST00000558314 PANK3Q9H999 370 aa21.38■■□□□ 1.01
TPM1-211ENST00000558314 POLKQ9UBT6 870 aa21.38■■□□□ 1.01
TPM1-211ENST00000558314 SPG7Q9UQ90 795 aa21.37■■□□□ 1.01
TPM1-211ENST00000558314 WASHC2AQ641Q2 1341 aa21.36■■□□□ 1.01
TPM1-211ENST00000558314 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
TPM1-211ENST00000558314 SLC16A10Q8TF71 515 aa21.35■■□□□ 1.01
TPM1-211ENST00000558314 PALLDQ8WX93 1383 aa21.35■■□□□ 1.01
TPM1-211ENST00000558314 MSL1Q68DK7 614 aa21.34■■□□□ 1.01
TPM1-211ENST00000558314 MAP2P11137 1827 aaKnown RBP21.34■■□□□ 1.01
TPM1-211ENST00000558314 LY75O60449 1722 aa21.33■■□□□ 1.01
TPM1-211ENST00000558314 EIF4A2Q14240 407 aaKnown RBP21.33■■□□□ 1.01
TPM1-211ENST00000558314 GPR162Q16538 588 aa21.31■■□□□ 1
TPM1-211ENST00000558314 MORC1Q86VD1 984 aa21.31■■□□□ 1
TPM1-211ENST00000558314 COL23A1Q86Y22 540 aaPredicted RBP21.31■■□□□ 1
TPM1-211ENST00000558314 PIGBQ92521 554 aa21.31■■□□□ 1
TPM1-211ENST00000558314 TUBGCP6Q96RT7 1819 aa21.3■■□□□ 1
TPM1-211ENST00000558314 SMARCC1Q92922 1105 aaPredicted RBP21.3■■□□□ 1
TPM1-211ENST00000558314 AK7Q96M32 723 aa21.29■■□□□ 1
TPM1-211ENST00000558314 TMOD3Q9NYL9 352 aa21.29■■□□□ 1
TPM1-211ENST00000558314 PHF14O94880 888 aa21.28■■□□□ 1
TPM1-211ENST00000558314 IFNL2Q8IZJ0 200 aa21.28■■□□□ 1
TPM1-211ENST00000558314 ANKRD26Q9UPS8 1709 aa21.27■■□□□ 1
TPM1-211ENST00000558314 SMIM5Q71RC9 77 aa21.27■■□□□ 1
TPM1-211ENST00000558314 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
TPM1-211ENST00000558314 PKD1L3Q7Z443 1732 aa21.26■□□□□ 0.99
TPM1-211ENST00000558314 TOGARAM1Q9Y4F4 1720 aa21.26■□□□□ 0.99
TPM1-211ENST00000558314 PHKG2P15735 406 aa21.26■□□□□ 0.99
TPM1-211ENST00000558314 NCAPD2Q15021 1401 aa21.26■□□□□ 0.99
TPM1-211ENST00000558314 QSER1Q2KHR3 1735 aa21.26■□□□□ 0.99
TPM1-211ENST00000558314 NKX1-1Q15270 411 aaPredicted RBP21.25■□□□□ 0.99
TPM1-211ENST00000558314 NLGN2Q8NFZ4 835 aa21.25■□□□□ 0.99
TPM1-211ENST00000558314 C5P01031 1676 aa21.24■□□□□ 0.99
TPM1-211ENST00000558314 CNGB1Q14028 1251 aaPredicted RBP21.24■□□□□ 0.99
TPM1-211ENST00000558314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.24■□□□□ 0.997e-8■■□□□ 13.6
TPM1-211ENST00000558314 ASAP1Q9ULH1 1129 aa21.24■□□□□ 0.99
TPM1-211ENST00000558314 ITGB4P16144 1822 aa21.24■□□□□ 0.99
TPM1-211ENST00000558314 MAP3K5Q99683 1374 aa21.23■□□□□ 0.99
TPM1-211ENST00000558314 LOC102724428A0A0B4J2F2 783 aa21.22■□□□□ 0.99
TPM1-211ENST00000558314 HMGB2P26583 209 aaKnown RBP21.22■□□□□ 0.99
TPM1-211ENST00000558314 SIK1P57059 783 aa21.22■□□□□ 0.99
TPM1-211ENST00000558314 FLAD1Q8NFF5 587 aa21.22■□□□□ 0.99
TPM1-211ENST00000558314 ATP6V1AP38606 617 aa21.21■□□□□ 0.99
TPM1-211ENST00000558314 PLEKHO1Q53GL0 409 aaPredicted RBP21.21■□□□□ 0.99
TPM1-211ENST00000558314 ZNF530Q6P9A1 599 aaPredicted RBP21.21■□□□□ 0.99
TPM1-211ENST00000558314 IGSF1Q8N6C5 1336 aa21.21■□□□□ 0.99
TPM1-211ENST00000558314 AEBP1Q8IUX7 1158 aa21.2■□□□□ 0.98
TPM1-211ENST00000558314 LINC00116Q8NCU8 138 aa21.2■□□□□ 0.98
TPM1-211ENST00000558314 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.19■□□□□ 0.98
TPM1-211ENST00000558314 AMIGO3Q86WK7 504 aa21.19■□□□□ 0.98
TPM1-211ENST00000558314 RBM42Q9BTD8 480 aaKnown RBP21.19■□□□□ 0.98
TPM1-211ENST00000558314 C4BP0C0L5 1744 aa21.18■□□□□ 0.98
TPM1-211ENST00000558314 GNPATO15228 680 aa21.18■□□□□ 0.98
TPM1-211ENST00000558314 ZNF784Q8NCA9 323 aaPredicted RBP21.18■□□□□ 0.98
TPM1-211ENST00000558314 ATG3Q9NT62 314 aa21.18■□□□□ 0.98
TPM1-211ENST00000558314 KIF7Q2M1P5 1343 aa21.18■□□□□ 0.98
TPM1-211ENST00000558314 ITPK1Q13572 414 aa21.17■□□□□ 0.98
TPM1-211ENST00000558314 SULT6B1Q6IMI4 303 aa21.17■□□□□ 0.98
TPM1-211ENST00000558314 TAF1LQ8IZX4 1826 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms