RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 COL3A1P02461 1466 aaPredicted RBP10.62□□□□□ -0.71
RTF1-205ENST00000558298 MARCH10Q8NA82 808 aaPredicted RBP10.62□□□□□ -0.71
RTF1-205ENST00000558298 LRP5O75197 1615 aa10.62□□□□□ -0.71
RTF1-205ENST00000558298 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
RTF1-205ENST00000558298 AMPHP49418 695 aa10.61□□□□□ -0.71
RTF1-205ENST00000558298 PDE3BQ13370 1112 aa10.61□□□□□ -0.71
RTF1-205ENST00000558298 RRS1Q15050 365 aaKnown RBP10.61□□□□□ -0.71
RTF1-205ENST00000558298 DDB1Q16531 1140 aa10.61□□□□□ -0.71
RTF1-205ENST00000558298 CAMKK2Q96RR4 588 aa10.61□□□□□ -0.71
RTF1-205ENST00000558298 NOP58Q9Y2X3 529 aaKnown RBP10.61□□□□□ -0.71
RTF1-205ENST00000558298 KDRP35968 1356 aa10.61□□□□□ -0.71
RTF1-205ENST00000558298 PAPPAQ13219 1627 aa10.6□□□□□ -0.71
RTF1-205ENST00000558298 BAG6P46379 1132 aa10.6□□□□□ -0.71
RTF1-205ENST00000558298 MORC1Q86VD1 984 aa10.6□□□□□ -0.71
RTF1-205ENST00000558298 EMILIN1Q9Y6C2 1016 aa10.6□□□□□ -0.71
RTF1-205ENST00000558298 IGSF1Q8N6C5 1336 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 DOT1LQ8TEK3 1739 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 BTAF1O14981 1849 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 MSH5O43196 834 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 TRIM37O94972 964 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 CSB-PGBD3P0DP91 1061 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 IL2RBP14784 551 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 ANP32AP39687 249 aaKnown RBP10.59□□□□□ -0.71
RTF1-205ENST00000558298 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 UBE2Q2Q8WVN8 375 aa10.59□□□□□ -0.71
RTF1-205ENST00000558298 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
RTF1-205ENST00000558298 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
RTF1-205ENST00000558298 PTF1AQ7RTS3 328 aa10.58□□□□□ -0.72
RTF1-205ENST00000558298 NLRP2Q9NX02 1062 aa10.58□□□□□ -0.72
RTF1-205ENST00000558298 TOGARAM1Q9Y4F4 1720 aa10.58□□□□□ -0.72
RTF1-205ENST00000558298 NBPF6Q5VWK0 638 aa10.57□□□□□ -0.72
RTF1-205ENST00000558298 NBPF4Q96M43 638 aa10.57□□□□□ -0.72
RTF1-205ENST00000558298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.57□□□□□ -0.723e-8■■□□□ 12.2
RTF1-205ENST00000558298 LY75O60449 1722 aa10.56□□□□□ -0.72
RTF1-205ENST00000558298 EZH2Q15910 746 aaKnown RBP10.56□□□□□ -0.72
RTF1-205ENST00000558298 BCL11BQ9C0K0 894 aaPredicted RBP10.56□□□□□ -0.72
RTF1-205ENST00000558298 CASZ1Q86V15 1759 aa10.56□□□□□ -0.72
RTF1-205ENST00000558298 ADAMTS7Q9UKP4 1686 aa10.56□□□□□ -0.72
RTF1-205ENST00000558298 EXOC5O00471 708 aa10.55□□□□□ -0.72
RTF1-205ENST00000558298 PLSCR1O15162 318 aa10.55□□□□□ -0.72
RTF1-205ENST00000558298 EIF4A2Q14240 407 aaKnown RBP10.55□□□□□ -0.72
RTF1-205ENST00000558298 APBA3O96018 575 aa10.54□□□□□ -0.72
RTF1-205ENST00000558298 IL13P35225 146 aa10.54□□□□□ -0.72
RTF1-205ENST00000558298 RALBP1Q15311 655 aa10.54□□□□□ -0.72
RTF1-205ENST00000558298 MTHFSP49914 203 aa10.53□□□□□ -0.72
RTF1-205ENST00000558298 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
RTF1-205ENST00000558298 PROM2Q8N271 834 aa10.53□□□□□ -0.72
RTF1-205ENST00000558298 LTV1Q96GA3 475 aaPredicted RBP10.53□□□□□ -0.72
RTF1-205ENST00000558298 EYA1Q99502 592 aa10.53□□□□□ -0.72
RTF1-205ENST00000558298 QSER1Q2KHR3 1735 aa10.53□□□□□ -0.72
RTF1-205ENST00000558298 KCNQ2O43526 872 aa10.52□□□□□ -0.73
RTF1-205ENST00000558298 PCDH11XQ9BZA7 1347 aa10.52□□□□□ -0.73
RTF1-205ENST00000558298 PCDH11YQ9BZA8 1340 aa10.52□□□□□ -0.73
RTF1-205ENST00000558298 ITGB4P16144 1822 aa10.51□□□□□ -0.73
RTF1-205ENST00000558298 VIRMAQ69YN4 1812 aaKnown RBP10.51□□□□□ -0.73
RTF1-205ENST00000558298 ZNF831Q5JPB2 1677 aa10.51□□□□□ -0.73
RTF1-205ENST00000558298 PPP2R1AP30153 589 aa10.51□□□□□ -0.73
RTF1-205ENST00000558298 USHBP1Q8N6Y0 703 aa10.51□□□□□ -0.73
RTF1-205ENST00000558298 RAPGEF4Q8WZA2 1011 aa10.51□□□□□ -0.73
RTF1-205ENST00000558298 CICQ96RK0 1608 aaPredicted RBP10.51□□□□□ -0.73
RTF1-205ENST00000558298 COL24A1Q17RW2 1714 aa10.5□□□□□ -0.73
RTF1-205ENST00000558298 SCN11AQ9UI33 1791 aa10.5□□□□□ -0.73
RTF1-205ENST00000558298 TUBGCP6Q96RT7 1819 aa10.5□□□□□ -0.73
RTF1-205ENST00000558298 PPM1GO15355 546 aaPredicted RBP10.5□□□□□ -0.73
RTF1-205ENST00000558298 TATP17735 454 aaPredicted RBP10.5□□□□□ -0.73
RTF1-205ENST00000558298 TNNT2P45379 298 aaPredicted RBP10.5□□□□□ -0.73
RTF1-205ENST00000558298 NKX1-1Q15270 411 aaPredicted RBP10.5□□□□□ -0.73
RTF1-205ENST00000558298 GLIPR1L2Q4G1C9 344 aa10.5□□□□□ -0.73
RTF1-205ENST00000558298 IPO9Q96P70 1041 aaKnown RBP10.5□□□□□ -0.73
RTF1-205ENST00000558298 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
RTF1-205ENST00000558298 MRC1P22897 1456 aa10.49□□□□□ -0.73
RTF1-205ENST00000558298 DIAPH1O60610 1272 aaKnown RBP10.49□□□□□ -0.73
RTF1-205ENST00000558298 DDX10Q13206 875 aaKnown RBP10.49□□□□□ -0.73
RTF1-205ENST00000558298 AMOTQ4VCS5 1084 aa10.49□□□□□ -0.73
RTF1-205ENST00000558298 ZCRB1Q8TBF4 217 aaKnown RBP10.49□□□□□ -0.73
RTF1-205ENST00000558298 CFAP53Q96M91 514 aa10.49□□□□□ -0.73
RTF1-205ENST00000558298 MYBBP1AQ9BQG0 1328 aaKnown RBP10.49□□□□□ -0.73
RTF1-205ENST00000558298 PSDA5PKW4 1024 aaPredicted RBP10.48□□□□□ -0.73
RTF1-205ENST00000558298 CYP27B1O15528 508 aa10.48□□□□□ -0.73
RTF1-205ENST00000558298 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
RTF1-205ENST00000558298 TAF1LQ8IZX4 1826 aa10.48□□□□□ -0.73
RTF1-205ENST00000558298 KAT6BQ8WYB5 2073 aa10.47□□□□□ -0.73
RTF1-205ENST00000558298 R3HDM1Q15032 1099 aaKnown RBP10.47□□□□□ -0.73
RTF1-205ENST00000558298 TXNRD1Q16881 649 aa10.47□□□□□ -0.73
RTF1-205ENST00000558298 ACSBG1Q96GR2 724 aa10.47□□□□□ -0.73
RTF1-205ENST00000558298 PRKRIP1Q9H875 184 aaPredicted RBP10.47□□□□□ -0.73
RTF1-205ENST00000558298 SPG7Q9UQ90 795 aa10.47□□□□□ -0.73
RTF1-205ENST00000558298 C5P01031 1676 aa10.47□□□□□ -0.73
RTF1-205ENST00000558298 SIPA1L3O60292 1781 aaPredicted RBP10.47□□□□□ -0.73
RTF1-205ENST00000558298 DDX54Q8TDD1 881 aaKnown RBP10.46□□□□□ -0.73
RTF1-205ENST00000558298 ZBED9Q6R2W3 1325 aa10.46□□□□□ -0.73
RTF1-205ENST00000558298 HSP90AB1P08238 724 aaKnown RBP10.45□□□□□ -0.74
RTF1-205ENST00000558298 LRRC4BQ9NT99 713 aa10.45□□□□□ -0.74
RTF1-205ENST00000558298 NUDCQ9Y266 331 aa10.45□□□□□ -0.74
RTF1-205ENST00000558298 KDM6AO15550 1401 aaPredicted RBP10.44□□□□□ -0.74
RTF1-205ENST00000558298 PHKG2P15735 406 aa10.44□□□□□ -0.74
RTF1-205ENST00000558298 PLEKHO1Q53GL0 409 aaPredicted RBP10.44□□□□□ -0.74
RTF1-205ENST00000558298 SULT6B1Q6IMI4 303 aa10.44□□□□□ -0.74
RTF1-205ENST00000558298 IFNL2Q8IZJ0 200 aa10.44□□□□□ -0.74
RTF1-205ENST00000558298 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms