RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
SNRPA1-206ENST00000558059 EXOC5O00471 708 aa12.17□□□□□ -0.46
SNRPA1-206ENST00000558059 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
SNRPA1-206ENST00000558059 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
SNRPA1-206ENST00000558059 IL2RBP14784 551 aa12.16□□□□□ -0.46
SNRPA1-206ENST00000558059 BCL9O00512 1426 aa12.16□□□□□ -0.46
SNRPA1-206ENST00000558059 RTL1A6NKG5 1358 aa12.16□□□□□ -0.46
SNRPA1-206ENST00000558059 TNS2Q63HR2 1409 aa12.15□□□□□ -0.46
SNRPA1-206ENST00000558059 PTF1AQ7RTS3 328 aa12.15□□□□□ -0.46
SNRPA1-206ENST00000558059 MAP2P11137 1827 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-206ENST00000558059 PANK3Q9H999 370 aa12.14□□□□□ -0.47
SNRPA1-206ENST00000558059 PARD3Q8TEW0 1356 aa12.14□□□□□ -0.47
SNRPA1-206ENST00000558059 CGNL1Q0VF96 1302 aa12.13□□□□□ -0.47
SNRPA1-206ENST00000558059 RREB1Q92766 1687 aa12.13□□□□□ -0.47
SNRPA1-206ENST00000558059 HSP90AB2PQ58FF8 381 aa12.13□□□□□ -0.47
SNRPA1-206ENST00000558059 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
SNRPA1-206ENST00000558059 PSDA5PKW4 1024 aaPredicted RBP12.12□□□□□ -0.47
SNRPA1-206ENST00000558059 PLSCR1O15162 318 aa12.12□□□□□ -0.47
SNRPA1-206ENST00000558059 NBPF6Q5VWK0 638 aa12.12□□□□□ -0.47
SNRPA1-206ENST00000558059 NBPF4Q96M43 638 aa12.12□□□□□ -0.47
SNRPA1-206ENST00000558059 EMILIN1Q9Y6C2 1016 aa12.12□□□□□ -0.47
SNRPA1-206ENST00000558059 INSRP06213 1382 aa12.12□□□□□ -0.47
SNRPA1-206ENST00000558059 KIF24Q5T7B8 1368 aa12.12□□□□□ -0.47
SNRPA1-206ENST00000558059 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
SNRPA1-206ENST00000558059 FLT4P35916 1363 aa12.11□□□□□ -0.47
SNRPA1-206ENST00000558059 HAX1O00165 279 aa12.11□□□□□ -0.47
SNRPA1-206ENST00000558059 ANKRD26Q9UPS8 1709 aa12.11□□□□□ -0.47
SNRPA1-206ENST00000558059 RGPD3A6NKT7 1758 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-206ENST00000558059 RGPD4Q7Z3J3 1758 aa12.1□□□□□ -0.47
SNRPA1-206ENST00000558059 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
SNRPA1-206ENST00000558059 KCNQ2O43526 872 aa12.1□□□□□ -0.47
SNRPA1-206ENST00000558059 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
SNRPA1-206ENST00000558059 R3HDM1Q15032 1099 aaKnown RBP12.1□□□□□ -0.47
SNRPA1-206ENST00000558059 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
SNRPA1-206ENST00000558059 KIF7Q2M1P5 1343 aa12.1□□□□□ -0.47
SNRPA1-206ENST00000558059 PROM2Q8N271 834 aa12.09□□□□□ -0.47
SNRPA1-206ENST00000558059 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
SNRPA1-206ENST00000558059 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
SNRPA1-206ENST00000558059 MEGF6O75095 1541 aa12.09□□□□□ -0.47
SNRPA1-206ENST00000558059 SHANK3Q9BYB0 1731 aa12.08□□□□□ -0.47
SNRPA1-206ENST00000558059 NHSQ6T4R5 1651 aa12.08□□□□□ -0.48
SNRPA1-206ENST00000558059 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-206ENST00000558059 ACSBG1Q96GR2 724 aa12.08□□□□□ -0.48
SNRPA1-206ENST00000558059 SMG6Q86US8 1419 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-206ENST00000558059 WASHC2AQ641Q2 1341 aa12.08□□□□□ -0.48
SNRPA1-206ENST00000558059 PPM1GO15355 546 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-206ENST00000558059 TNNT2P45379 298 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-206ENST00000558059 ZCRB1Q8TBF4 217 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-206ENST00000558059 BTAF1O14981 1849 aa12.07□□□□□ -0.48
SNRPA1-206ENST00000558059 NSD2O96028 1365 aa12.05□□□□□ -0.48
SNRPA1-206ENST00000558059 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
SNRPA1-206ENST00000558059 NBPF14Q5TI25 921 aa12.05□□□□□ -0.48
SNRPA1-206ENST00000558059 RAPGEF4Q8WZA2 1011 aa12.05□□□□□ -0.48
SNRPA1-206ENST00000558059 KNSTRNQ9Y448 316 aa12.05□□□□□ -0.48
SNRPA1-206ENST00000558059 LRP5O75197 1615 aa12.04□□□□□ -0.48
SNRPA1-206ENST00000558059 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
SNRPA1-206ENST00000558059 TATP17735 454 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-206ENST00000558059 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-206ENST00000558059 EYA1Q99502 592 aa12.04□□□□□ -0.48
SNRPA1-206ENST00000558059 PER1O15534 1290 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-206ENST00000558059 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-206ENST00000558059 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
SNRPA1-206ENST00000558059 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-206ENST00000558059 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-206ENST00000558059 EVX2Q03828 476 aa12.02□□□□□ -0.49
SNRPA1-206ENST00000558059 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
SNRPA1-206ENST00000558059 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
SNRPA1-206ENST00000558059 CYP27B1O15528 508 aa12.01□□□□□ -0.49
SNRPA1-206ENST00000558059 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
SNRPA1-206ENST00000558059 SYTL4Q96C24 671 aaPredicted RBP11.99□□□□□ -0.49
SNRPA1-206ENST00000558059 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
SNRPA1-206ENST00000558059 PCDH11XQ9BZA7 1347 aa11.99□□□□□ -0.49
SNRPA1-206ENST00000558059 PCDH11YQ9BZA8 1340 aa11.99□□□□□ -0.49
SNRPA1-206ENST00000558059 ITGB4P16144 1822 aa11.98□□□□□ -0.49
SNRPA1-206ENST00000558059 CASZ1Q86V15 1759 aa11.98□□□□□ -0.49
SNRPA1-206ENST00000558059 IGSF1Q8N6C5 1336 aa11.98□□□□□ -0.49
SNRPA1-206ENST00000558059 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
SNRPA1-206ENST00000558059 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
SNRPA1-206ENST00000558059 STK32BQ9NY57 414 aa11.98□□□□□ -0.49
SNRPA1-206ENST00000558059 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNRPA1-206ENST00000558059 LY75O60449 1722 aa11.97□□□□□ -0.49
SNRPA1-206ENST00000558059 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
SNRPA1-206ENST00000558059 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
SNRPA1-206ENST00000558059 SPG7Q9UQ90 795 aa11.97□□□□□ -0.49
SNRPA1-206ENST00000558059 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
SNRPA1-206ENST00000558059 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
SNRPA1-206ENST00000558059 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
SNRPA1-206ENST00000558059 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
SNRPA1-206ENST00000558059 NPC1L1Q9UHC9 1359 aa11.95□□□□□ -0.5
SNRPA1-206ENST00000558059 IL13P35225 146 aa11.95□□□□□ -0.5
SNRPA1-206ENST00000558059 MTHFSP49914 203 aa11.95□□□□□ -0.5
SNRPA1-206ENST00000558059 KCNQ4P56696 695 aa11.95□□□□□ -0.5
SNRPA1-206ENST00000558059 ZNF827Q17R98 1081 aa11.95□□□□□ -0.5
SNRPA1-206ENST00000558059 SPON1Q9HCB6 807 aa11.95□□□□□ -0.5
SNRPA1-206ENST00000558059 PLEKHG2Q9H7P9 1386 aa11.94□□□□□ -0.5
SNRPA1-206ENST00000558059 PHKG2P15735 406 aa11.94□□□□□ -0.5
SNRPA1-206ENST00000558059 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
SNRPA1-206ENST00000558059 AEBP1Q8IUX7 1158 aa11.94□□□□□ -0.5
SNRPA1-206ENST00000558059 IFNL2Q8IZJ0 200 aa11.94□□□□□ -0.5
SNRPA1-206ENST00000558059 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms