RNA–Protein interactions for RNA: ENST00000557862.1

AC009997.1-201, humanhuman

BASIC

Gene AC009997.1, Length 129 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009997.1-201ENST00000557862 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
AC009997.1-201ENST00000557862 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
AC009997.1-201ENST00000557862 BTAF1O14981 1849 aa11.69□□□□□ -0.54
AC009997.1-201ENST00000557862 ANKRD36BQ8N2N9 1353 aa11.68□□□□□ -0.54
AC009997.1-201ENST00000557862 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
AC009997.1-201ENST00000557862 FYB1O15117 783 aa11.68□□□□□ -0.54
AC009997.1-201ENST00000557862 TMF1P82094 1093 aa11.68□□□□□ -0.54
AC009997.1-201ENST00000557862 PELP1Q8IZL8 1130 aaKnown RBP11.68□□□□□ -0.54
AC009997.1-201ENST00000557862 RAPGEF4Q8WZA2 1011 aa11.68□□□□□ -0.54
AC009997.1-201ENST00000557862 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
AC009997.1-201ENST00000557862 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
AC009997.1-201ENST00000557862 TATP17735 454 aaPredicted RBP11.67□□□□□ -0.54
AC009997.1-201ENST00000557862 USHBP1Q8N6Y0 703 aa11.67□□□□□ -0.54
AC009997.1-201ENST00000557862 PAPPAQ13219 1627 aa11.67□□□□□ -0.54
AC009997.1-201ENST00000557862 CGNL1Q0VF96 1302 aa11.66□□□□□ -0.54
AC009997.1-201ENST00000557862 GOLGB1Q14789 3259 aaKnown RBP11.66□□□□□ -0.54
AC009997.1-201ENST00000557862 USP47Q96K76 1375 aa11.66□□□□□ -0.54
AC009997.1-201ENST00000557862 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
AC009997.1-201ENST00000557862 HSP90AB2PQ58FF8 381 aa11.65□□□□□ -0.54
AC009997.1-201ENST00000557862 RTL1A6NKG5 1358 aa11.65□□□□□ -0.55
AC009997.1-201ENST00000557862 SMG6Q86US8 1419 aaKnown RBP11.64□□□□□ -0.55
AC009997.1-201ENST00000557862 HMGB2P26583 209 aaKnown RBP11.64□□□□□ -0.55
AC009997.1-201ENST00000557862 COL23A1Q86Y22 540 aaPredicted RBP11.64□□□□□ -0.55
AC009997.1-201ENST00000557862 MEGF6O75095 1541 aa11.64□□□□□ -0.55
AC009997.1-201ENST00000557862 NSD2O96028 1365 aa11.64□□□□□ -0.55
AC009997.1-201ENST00000557862 FAM208AQ9UK61 1670 aaKnown RBP11.63□□□□□ -0.55
AC009997.1-201ENST00000557862 C1QTNF8P60827 252 aa11.63□□□□□ -0.55
AC009997.1-201ENST00000557862 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
AC009997.1-201ENST00000557862 NLGN2Q8NFZ4 835 aa11.63□□□□□ -0.55
AC009997.1-201ENST00000557862 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
AC009997.1-201ENST00000557862 PPM1GO15355 546 aaPredicted RBP11.62□□□□□ -0.55
AC009997.1-201ENST00000557862 MSL1Q68DK7 614 aa11.62□□□□□ -0.55
AC009997.1-201ENST00000557862 INSRP06213 1382 aa11.62□□□□□ -0.55
AC009997.1-201ENST00000557862 PCDH11XQ9BZA7 1347 aa11.61□□□□□ -0.55
AC009997.1-201ENST00000557862 PCDH11YQ9BZA8 1340 aa11.61□□□□□ -0.55
AC009997.1-201ENST00000557862 GRIN3BO60391 1043 aa11.61□□□□□ -0.55
AC009997.1-201ENST00000557862 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
AC009997.1-201ENST00000557862 CHD4Q14839 1912 aa11.6□□□□□ -0.55
AC009997.1-201ENST00000557862 RGPD2P0DJD1 1756 aa11.6□□□□□ -0.55
AC009997.1-201ENST00000557862 FLT4P35916 1363 aa11.6□□□□□ -0.55
AC009997.1-201ENST00000557862 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
AC009997.1-201ENST00000557862 CYP27B1O15528 508 aa11.59□□□□□ -0.55
AC009997.1-201ENST00000557862 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
AC009997.1-201ENST00000557862 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
AC009997.1-201ENST00000557862 EMILIN1Q9Y6C2 1016 aa11.59□□□□□ -0.55
AC009997.1-201ENST00000557862 DOT1LQ8TEK3 1739 aa11.59□□□□□ -0.55
AC009997.1-201ENST00000557862 QSER1Q2KHR3 1735 aa11.58□□□□□ -0.56
AC009997.1-201ENST00000557862 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
AC009997.1-201ENST00000557862 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
AC009997.1-201ENST00000557862 YBX3P16989 372 aaKnown RBP eCLIP11.58□□□□□ -0.56
AC009997.1-201ENST00000557862 AK7Q96M32 723 aa11.58□□□□□ -0.56
AC009997.1-201ENST00000557862 SPG7Q9UQ90 795 aa11.58□□□□□ -0.56
AC009997.1-201ENST00000557862 LY75O60449 1722 aa11.57□□□□□ -0.56
AC009997.1-201ENST00000557862 TRIM26Q12899 539 aaPredicted RBP11.57□□□□□ -0.56
AC009997.1-201ENST00000557862 PIGBQ92521 554 aa11.57□□□□□ -0.56
AC009997.1-201ENST00000557862 CD2APQ9Y5K6 639 aa11.57□□□□□ -0.56
AC009997.1-201ENST00000557862 PHF14O94880 888 aa11.56□□□□□ -0.56
AC009997.1-201ENST00000557862 POLR3GLQ9BT43 218 aa11.56□□□□□ -0.56
AC009997.1-201ENST00000557862 SHANK3Q9BYB0 1731 aa11.56□□□□□ -0.56
AC009997.1-201ENST00000557862 NSD3Q9BZ95 1437 aa11.55□□□□□ -0.56
AC009997.1-201ENST00000557862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
AC009997.1-201ENST00000557862 NKX1-1Q15270 411 aaPredicted RBP11.55□□□□□ -0.56
AC009997.1-201ENST00000557862 EYA1Q99502 592 aa11.55□□□□□ -0.56
AC009997.1-201ENST00000557862 TMOD3Q9NYL9 352 aa11.55□□□□□ -0.56
AC009997.1-201ENST00000557862 TUBGCP6Q96RT7 1819 aa11.55□□□□□ -0.56
AC009997.1-201ENST00000557862 WASHC2AQ641Q2 1341 aa11.55□□□□□ -0.56
AC009997.1-201ENST00000557862 COL24A1Q17RW2 1714 aa11.55□□□□□ -0.56
AC009997.1-201ENST00000557862 LOC102724428A0A0B4J2F2 783 aa11.54□□□□□ -0.56
AC009997.1-201ENST00000557862 SIK1P57059 783 aa11.54□□□□□ -0.56
AC009997.1-201ENST00000557862 SMIM5Q71RC9 77 aa11.54□□□□□ -0.56
AC009997.1-201ENST00000557862 TNNT2P45379 298 aaPredicted RBP11.53□□□□□ -0.56
AC009997.1-201ENST00000557862 AMIGO3Q86WK7 504 aa11.53□□□□□ -0.56
AC009997.1-201ENST00000557862 IFNL2Q8IZJ0 200 aa11.53□□□□□ -0.56
AC009997.1-201ENST00000557862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.56
AC009997.1-201ENST00000557862 POLKQ9UBT6 870 aa11.53□□□□□ -0.56
AC009997.1-201ENST00000557862 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
AC009997.1-201ENST00000557862 LINC00116Q8NCU8 138 aa11.52□□□□□ -0.57
AC009997.1-201ENST00000557862 ASAP1Q9ULH1 1129 aa11.52□□□□□ -0.57
AC009997.1-201ENST00000557862 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
AC009997.1-201ENST00000557862 GNPATO15228 680 aa11.51□□□□□ -0.57
AC009997.1-201ENST00000557862 PHKG2P15735 406 aa11.51□□□□□ -0.57
AC009997.1-201ENST00000557862 SSFA2P28290 1259 aa11.51□□□□□ -0.57
AC009997.1-201ENST00000557862 WWC3Q9ULE0 1092 aa11.51□□□□□ -0.57
AC009997.1-201ENST00000557862 KIF20BQ96Q89 1820 aa11.51□□□□□ -0.57
AC009997.1-201ENST00000557862 CEP350Q5VT06 3117 aa11.51□□□□□ -0.57
AC009997.1-201ENST00000557862 C5P01031 1676 aa11.5□□□□□ -0.57
AC009997.1-201ENST00000557862 ITPK1Q13572 414 aa11.5□□□□□ -0.57
AC009997.1-201ENST00000557862 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
AC009997.1-201ENST00000557862 ZNF526Q8TF50 670 aaPredicted RBP11.5□□□□□ -0.57
AC009997.1-201ENST00000557862 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
AC009997.1-201ENST00000557862 ATG3Q9NT62 314 aa11.5□□□□□ -0.57
AC009997.1-201ENST00000557862 IGSF1Q8N6C5 1336 aa11.5□□□□□ -0.57
AC009997.1-201ENST00000557862 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
AC009997.1-201ENST00000557862 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
AC009997.1-201ENST00000557862 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
AC009997.1-201ENST00000557862 PLEKHO1Q53GL0 409 aaPredicted RBP11.48□□□□□ -0.57
AC009997.1-201ENST00000557862 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
AC009997.1-201ENST00000557862 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
AC009997.1-201ENST00000557862 RTCBQ9Y3I0 505 aaKnown RBP11.48□□□□□ -0.57
AC009997.1-201ENST00000557862 NCAPD2Q15021 1401 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms