RNA–Protein interactions for RNA: ENST00000557831.1

RMDN3-203, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 954 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-203ENST00000557831 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
RMDN3-203ENST00000557831 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
RMDN3-203ENST00000557831 SYT17Q9BSW7 474 aa12.63□□□□□ -0.39
RMDN3-203ENST00000557831 GGNBP2Q9H3C7 697 aa12.63□□□□□ -0.39
RMDN3-203ENST00000557831 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
RMDN3-203ENST00000557831 TUBGCP6Q96RT7 1819 aa12.62□□□□□ -0.39
RMDN3-203ENST00000557831 NBPF6Q5VWK0 638 aa12.62□□□□□ -0.39
RMDN3-203ENST00000557831 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
RMDN3-203ENST00000557831 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
RMDN3-203ENST00000557831 SYTL4Q96C24 671 aaPredicted RBP12.62□□□□□ -0.39
RMDN3-203ENST00000557831 NBPF4Q96M43 638 aa12.62□□□□□ -0.39
RMDN3-203ENST00000557831 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
RMDN3-203ENST00000557831 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
RMDN3-203ENST00000557831 TMF1P82094 1093 aa12.61□□□□□ -0.39
RMDN3-203ENST00000557831 USHBP1Q8N6Y0 703 aa12.61□□□□□ -0.39
RMDN3-203ENST00000557831 ZCRB1Q8TBF4 217 aaKnown RBP12.61□□□□□ -0.39
RMDN3-203ENST00000557831 USP47Q96K76 1375 aa12.6□□□□□ -0.39
RMDN3-203ENST00000557831 ARXQ96QS3 562 aa12.6□□□□□ -0.39
RMDN3-203ENST00000557831 MEGF6O75095 1541 aa12.6□□□□□ -0.39
RMDN3-203ENST00000557831 NSD2O96028 1365 aa12.59□□□□□ -0.39
RMDN3-203ENST00000557831 FAM208AQ9UK61 1670 aaKnown RBP12.59□□□□□ -0.39
RMDN3-203ENST00000557831 TRIM26Q12899 539 aaPredicted RBP12.59□□□□□ -0.39
RMDN3-203ENST00000557831 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
RMDN3-203ENST00000557831 HSP90AB2PQ58FF8 381 aa12.58□□□□□ -0.4
RMDN3-203ENST00000557831 DOT1LQ8TEK3 1739 aa12.58□□□□□ -0.4
RMDN3-203ENST00000557831 CARD14Q9BXL6 1004 aa12.58□□□□□ -0.4
RMDN3-203ENST00000557831 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
RMDN3-203ENST00000557831 RTL1A6NKG5 1358 aa12.57□□□□□ -0.4
RMDN3-203ENST00000557831 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
RMDN3-203ENST00000557831 TATP17735 454 aaPredicted RBP12.55□□□□□ -0.4
RMDN3-203ENST00000557831 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
RMDN3-203ENST00000557831 RAPGEF4Q8WZA2 1011 aa12.55□□□□□ -0.4
RMDN3-203ENST00000557831 INSRP06213 1382 aa12.55□□□□□ -0.4
RMDN3-203ENST00000557831 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
RMDN3-203ENST00000557831 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
RMDN3-203ENST00000557831 ZNF784Q8NCA9 323 aaPredicted RBP12.54□□□□□ -0.4
RMDN3-203ENST00000557831 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
RMDN3-203ENST00000557831 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
RMDN3-203ENST00000557831 CDCA8Q53HL2 280 aa12.53□□□□□ -0.4
RMDN3-203ENST00000557831 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
RMDN3-203ENST00000557831 MAP3K5Q99683 1374 aa12.53□□□□□ -0.4
RMDN3-203ENST00000557831 KIF20BQ96Q89 1820 aa12.53□□□□□ -0.4
RMDN3-203ENST00000557831 SMG6Q86US8 1419 aaKnown RBP12.53□□□□□ -0.4
RMDN3-203ENST00000557831 QSER1Q2KHR3 1735 aa12.52□□□□□ -0.41
RMDN3-203ENST00000557831 CYP27B1O15528 508 aa12.52□□□□□ -0.41
RMDN3-203ENST00000557831 POLD1P28340 1107 aa12.52□□□□□ -0.41
RMDN3-203ENST00000557831 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
RMDN3-203ENST00000557831 FLT4P35916 1363 aa12.52□□□□□ -0.41
RMDN3-203ENST00000557831 NSD3Q9BZ95 1437 aa12.52□□□□□ -0.41
RMDN3-203ENST00000557831 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
RMDN3-203ENST00000557831 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
RMDN3-203ENST00000557831 GPR162Q16538 588 aa12.51□□□□□ -0.41
RMDN3-203ENST00000557831 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
RMDN3-203ENST00000557831 LY75O60449 1722 aa12.51□□□□□ -0.41
RMDN3-203ENST00000557831 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
RMDN3-203ENST00000557831 MSL1Q68DK7 614 aa12.5□□□□□ -0.41
RMDN3-203ENST00000557831 MPRIPQ6WCQ1 1025 aa12.5□□□□□ -0.41
RMDN3-203ENST00000557831 PCDH11XQ9BZA7 1347 aa12.5□□□□□ -0.41
RMDN3-203ENST00000557831 PCDH11YQ9BZA8 1340 aa12.5□□□□□ -0.41
RMDN3-203ENST00000557831 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
RMDN3-203ENST00000557831 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
RMDN3-203ENST00000557831 PALLDQ8WX93 1383 aa12.48□□□□□ -0.41
RMDN3-203ENST00000557831 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
RMDN3-203ENST00000557831 EYA1Q99502 592 aa12.48□□□□□ -0.41
RMDN3-203ENST00000557831 UTRNP46939 3433 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 ITGB4P16144 1822 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 TAF1LQ8IZX4 1826 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 PIGBQ92521 554 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 POLR3GLQ9BT43 218 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 TIMELESSQ9UNS1 1208 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 COL24A1Q17RW2 1714 aa12.47□□□□□ -0.41
RMDN3-203ENST00000557831 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
RMDN3-203ENST00000557831 YBX3P16989 372 aaKnown RBP eCLIP12.45□□□□□ -0.426e-6■□□□□ 10.6
RMDN3-203ENST00000557831 TNNT2P45379 298 aaPredicted RBP12.45□□□□□ -0.42
RMDN3-203ENST00000557831 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
RMDN3-203ENST00000557831 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
RMDN3-203ENST00000557831 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
RMDN3-203ENST00000557831 C5P01031 1676 aa12.44□□□□□ -0.42
RMDN3-203ENST00000557831 TOGARAM1Q9Y4F4 1720 aa12.43□□□□□ -0.42
RMDN3-203ENST00000557831 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
RMDN3-203ENST00000557831 FLAD1Q8NFF5 587 aa12.43□□□□□ -0.42
RMDN3-203ENST00000557831 ASAP1Q9ULH1 1129 aa12.43□□□□□ -0.42
RMDN3-203ENST00000557831 MAP2P11137 1827 aaKnown RBP12.42□□□□□ -0.42
RMDN3-203ENST00000557831 PHF14O94880 888 aa12.42□□□□□ -0.42
RMDN3-203ENST00000557831 HSPA5P11021 654 aaKnown RBP12.42□□□□□ -0.42
RMDN3-203ENST00000557831 PHKG2P15735 406 aa12.42□□□□□ -0.42
RMDN3-203ENST00000557831 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
RMDN3-203ENST00000557831 AK7Q96M32 723 aa12.42□□□□□ -0.42
RMDN3-203ENST00000557831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
RMDN3-203ENST00000557831 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
RMDN3-203ENST00000557831 LOC102724428A0A0B4J2F2 783 aa12.41□□□□□ -0.42
RMDN3-203ENST00000557831 SIK1P57059 783 aa12.41□□□□□ -0.42
RMDN3-203ENST00000557831 C1QTNF8P60827 252 aa12.41□□□□□ -0.42
RMDN3-203ENST00000557831 ITPK1Q13572 414 aa12.41□□□□□ -0.42
RMDN3-203ENST00000557831 PANK3Q9H999 370 aa12.41□□□□□ -0.42
RMDN3-203ENST00000557831 TMOD3Q9NYL9 352 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms