RNA–Protein interactions for RNA: ENST00000557820.5

PKNOX1-207, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 4

Gene PKNOX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-207ENST00000557820 ACSBG1Q96GR2 724 aa8.69□□□□□ -1.02
PKNOX1-207ENST00000557820 INSRP06213 1382 aa8.69□□□□□ -1.02
PKNOX1-207ENST00000557820 PSDA5PKW4 1024 aaPredicted RBP8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 EXOC5O00471 708 aa8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 KCNQ2O43526 872 aa8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 BAG6P46379 1132 aa8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 AMER1Q5JTC6 1135 aaPredicted RBP8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 MORC1Q86VD1 984 aa8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 DDX54Q8TDD1 881 aaKnown RBP8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 KNSTRNQ9Y448 316 aa8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 SMG6Q86US8 1419 aaKnown RBP8.68□□□□□ -1.02
PKNOX1-207ENST00000557820 CDCA7Q9BWT1 371 aaPredicted RBP8.67□□□□□ -1.02
PKNOX1-207ENST00000557820 SHANK3Q9BYB0 1731 aa8.67□□□□□ -1.02
PKNOX1-207ENST00000557820 MAP2P11137 1827 aaKnown RBP8.66□□□□□ -1.02
PKNOX1-207ENST00000557820 NSD2O96028 1365 aa8.66□□□□□ -1.02
PKNOX1-207ENST00000557820 EIF4A2Q14240 407 aaKnown RBP8.66□□□□□ -1.02
PKNOX1-207ENST00000557820 EYA1Q99502 592 aa8.66□□□□□ -1.02
PKNOX1-207ENST00000557820 PER1O15534 1290 aaPredicted RBP8.65□□□□□ -1.02
PKNOX1-207ENST00000557820 CAMKK2Q96RR4 588 aa8.65□□□□□ -1.02
PKNOX1-207ENST00000557820 SBF2Q86WG5 1849 aa8.65□□□□□ -1.02
PKNOX1-207ENST00000557820 KIF24Q5T7B8 1368 aa8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 NUP188Q5SRE5 1749 aa8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 DOT1LQ8TEK3 1739 aa8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 ABCB7O75027 752 aa8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 R3HDM1Q15032 1099 aaKnown RBP8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 ZCRB1Q8TBF4 217 aaKnown RBP8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 RAPGEF4Q8WZA2 1011 aa8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 ZNF219Q9P2Y4 722 aaPredicted RBP8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 NHSQ6T4R5 1651 aa8.64□□□□□ -1.03
PKNOX1-207ENST00000557820 RREB1Q92766 1687 aa8.63□□□□□ -1.03
PKNOX1-207ENST00000557820 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
PKNOX1-207ENST00000557820 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
PKNOX1-207ENST00000557820 NCAPD2Q15021 1401 aa8.63□□□□□ -1.03
PKNOX1-207ENST00000557820 MTHFSP49914 203 aa8.62□□□□□ -1.03
PKNOX1-207ENST00000557820 KCNQ4P56696 695 aa8.62□□□□□ -1.03
PKNOX1-207ENST00000557820 SAMD1Q6SPF0 538 aaPredicted RBP8.62□□□□□ -1.03
PKNOX1-207ENST00000557820 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
PKNOX1-207ENST00000557820 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
PKNOX1-207ENST00000557820 BCL9O00512 1426 aa8.62□□□□□ -1.03
PKNOX1-207ENST00000557820 IGSF1Q8N6C5 1336 aa8.61□□□□□ -1.03
PKNOX1-207ENST00000557820 PKD1L3Q7Z443 1732 aa8.61□□□□□ -1.03
PKNOX1-207ENST00000557820 TOGARAM1Q9Y4F4 1720 aa8.61□□□□□ -1.03
PKNOX1-207ENST00000557820 CYP27B1O15528 508 aa8.61□□□□□ -1.03
PKNOX1-207ENST00000557820 PRIM1P49642 420 aaKnown RBP8.61□□□□□ -1.03
PKNOX1-207ENST00000557820 PROM2Q8N271 834 aa8.61□□□□□ -1.03
PKNOX1-207ENST00000557820 BTAF1O14981 1849 aa8.61□□□□□ -1.03
PKNOX1-207ENST00000557820 PCDH11XQ9BZA7 1347 aa8.6□□□□□ -1.03
PKNOX1-207ENST00000557820 PCDH11YQ9BZA8 1340 aa8.6□□□□□ -1.03
PKNOX1-207ENST00000557820 COL3A1P02461 1466 aaPredicted RBP8.6□□□□□ -1.03
PKNOX1-207ENST00000557820 IL13P35225 146 aa8.6□□□□□ -1.03
PKNOX1-207ENST00000557820 TXNRD1Q16881 649 aa8.6□□□□□ -1.03
PKNOX1-207ENST00000557820 MYCNP04198 464 aaPredicted RBP8.59□□□□□ -1.03
PKNOX1-207ENST00000557820 HMOX1P09601 288 aa8.59□□□□□ -1.03
PKNOX1-207ENST00000557820 SULT6B1Q6IMI4 303 aa8.59□□□□□ -1.03
PKNOX1-207ENST00000557820 PDGFDQ9GZP0 370 aaPredicted RBP8.59□□□□□ -1.03
PKNOX1-207ENST00000557820 DDX10Q13206 875 aaKnown RBP8.58□□□□□ -1.04
PKNOX1-207ENST00000557820 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
PKNOX1-207ENST00000557820 PARD3Q8TEW0 1356 aa8.58□□□□□ -1.04
PKNOX1-207ENST00000557820 NPC1L1Q9UHC9 1359 aa8.58□□□□□ -1.04
PKNOX1-207ENST00000557820 RGPD3A6NKT7 1758 aaPredicted RBP8.58□□□□□ -1.04
PKNOX1-207ENST00000557820 RGPD4Q7Z3J3 1758 aa8.58□□□□□ -1.04
PKNOX1-207ENST00000557820 PLSCR1O15162 318 aa8.57□□□□□ -1.04
PKNOX1-207ENST00000557820 PHKG2P15735 406 aa8.57□□□□□ -1.04
PKNOX1-207ENST00000557820 PPP2R1AP30153 589 aa8.57□□□□□ -1.04
PKNOX1-207ENST00000557820 ZNF827Q17R98 1081 aa8.57□□□□□ -1.04
PKNOX1-207ENST00000557820 ZNF530Q6P9A1 599 aaPredicted RBP8.57□□□□□ -1.04
PKNOX1-207ENST00000557820 MPRIPQ6WCQ1 1025 aa8.57□□□□□ -1.04
PKNOX1-207ENST00000557820 SPG7Q9UQ90 795 aa8.57□□□□□ -1.04
PKNOX1-207ENST00000557820 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
PKNOX1-207ENST00000557820 KDM6AO15550 1401 aaPredicted RBP8.56□□□□□ -1.04
PKNOX1-207ENST00000557820 U2SURPO15042 1029 aaKnown RBP8.56□□□□□ -1.04
PKNOX1-207ENST00000557820 DIAPH1O60610 1272 aaKnown RBP8.56□□□□□ -1.04
PKNOX1-207ENST00000557820 KAT6BQ8WYB5 2073 aa8.55□□□□□ -1.04
PKNOX1-207ENST00000557820 NBPF14Q5TI25 921 aa8.55□□□□□ -1.04
PKNOX1-207ENST00000557820 PIGBQ92521 554 aa8.55□□□□□ -1.04
PKNOX1-207ENST00000557820 KDRP35968 1356 aa8.55□□□□□ -1.04
PKNOX1-207ENST00000557820 PALLDQ8WX93 1383 aa8.55□□□□□ -1.04
PKNOX1-207ENST00000557820 SMIM5Q71RC9 77 aa8.54□□□□□ -1.04
PKNOX1-207ENST00000557820 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
PKNOX1-207ENST00000557820 STK32BQ9NY57 414 aa8.54□□□□□ -1.04
PKNOX1-207ENST00000557820 CCNL1Q9UK58 526 aaPredicted RBP8.54□□□□□ -1.04
PKNOX1-207ENST00000557820 ITGB4P16144 1822 aa8.54□□□□□ -1.04
PKNOX1-207ENST00000557820 ZBTB7AO95365 584 aa8.53□□□□□ -1.04
PKNOX1-207ENST00000557820 NKX1-1Q15270 411 aaPredicted RBP8.53□□□□□ -1.04
PKNOX1-207ENST00000557820 PLEKHO1Q53GL0 409 aaPredicted RBP8.53□□□□□ -1.04
PKNOX1-207ENST00000557820 TMOD3Q9NYL9 352 aa8.53□□□□□ -1.04
PKNOX1-207ENST00000557820 ASAP1Q9ULH1 1129 aa8.53□□□□□ -1.04
PKNOX1-207ENST00000557820 LY75O60449 1722 aa8.53□□□□□ -1.04
PKNOX1-207ENST00000557820 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
PKNOX1-207ENST00000557820 LRP5O75197 1615 aa8.52□□□□□ -1.05
PKNOX1-207ENST00000557820 SLC15A2Q16348 729 aa8.52□□□□□ -1.05
PKNOX1-207ENST00000557820 MTHFSDQ2M296 383 aaKnown RBP8.52□□□□□ -1.05
PKNOX1-207ENST00000557820 C1orf141Q5JVX7 400 aa8.52□□□□□ -1.05
PKNOX1-207ENST00000557820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.52□□□□□ -1.05
PKNOX1-207ENST00000557820 TUBGCP6Q96RT7 1819 aa8.52□□□□□ -1.05
PKNOX1-207ENST00000557820 U2AF1L5P0DN76 240 aaPredicted RBP8.51□□□□□ -1.05
PKNOX1-207ENST00000557820 PRKAR2BP31323 418 aa8.51□□□□□ -1.05
PKNOX1-207ENST00000557820 U2AF1Q01081 240 aaKnown RBP eCLIP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms