RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	FSTL1	Q12841	308 aa		13.76	□□□□□ -0.21
PABPN1-208	ENST00000557702	FLAD1	Q8NFF5	587 aa		13.76	□□□□□ -0.21
PABPN1-208	ENST00000557702	ERBB3	P21860	1342 aa		13.75	□□□□□ -0.21
PABPN1-208	ENST00000557702	HMGB2	P26583	209 aa	Known RBP	13.74	□□□□□ -0.21
PABPN1-208	ENST00000557702	TTC21B	Q7Z4L5	1316 aa		13.73	□□□□□ -0.21
PABPN1-208	ENST00000557702	HSPA1A	P0DMV8	641 aa	Known RBP	13.73	□□□□□ -0.21
PABPN1-208	ENST00000557702	HSPA1B	P0DMV9	641 aa	Known RBP	13.73	□□□□□ -0.21
PABPN1-208	ENST00000557702	ZNF692	Q9BU19	519 aa	Predicted RBP	13.73	□□□□□ -0.21
PABPN1-208	ENST00000557702	PIK3C2A	O00443	1686 aa		13.72	□□□□□ -0.21
PABPN1-208	ENST00000557702	ANKRD36B	Q8N2N9	1353 aa		13.72	□□□□□ -0.21
PABPN1-208	ENST00000557702	TTC21A	Q8NDW8	1320 aa		13.71	□□□□□ -0.21
PABPN1-208	ENST00000557702	ANKRD24	Q8TF21	1146 aa		13.71	□□□□□ -0.21
PABPN1-208	ENST00000557702	USP47	Q96K76	1375 aa		13.7	□□□□□ -0.22
PABPN1-208	ENST00000557702	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.69	□□□□□ -0.22
PABPN1-208	ENST00000557702	NSD2	O96028	1365 aa		13.69	□□□□□ -0.22
PABPN1-208	ENST00000557702	NFAT5	O94916	1531 aa		13.69	□□□□□ -0.22
PABPN1-208	ENST00000557702	LY75	O60449	1722 aa		13.68	□□□□□ -0.22
PABPN1-208	ENST00000557702	ARHGAP27	Q6ZUM4	889 aa		13.68	□□□□□ -0.22
PABPN1-208	ENST00000557702	BCS1L	Q9Y276	419 aa		13.67	□□□□□ -0.22
PABPN1-208	ENST00000557702	CIC	Q96RK0	1608 aa	Predicted RBP	13.67	□□□□□ -0.22
PABPN1-208	ENST00000557702	SMC1B	Q8NDV3	1235 aa		13.66	□□□□□ -0.22
PABPN1-208	ENST00000557702	QRICH2	Q9H0J4	1663 aa		13.66	□□□□□ -0.22
PABPN1-208	ENST00000557702	KDM2B	Q8NHM5	1336 aa		13.65	□□□□□ -0.22
PABPN1-208	ENST00000557702	AK7	Q96M32	723 aa		13.65	□□□□□ -0.22
PABPN1-208	ENST00000557702	NBPF1	Q3BBV0	1214 aa		13.64	□□□□□ -0.23
PABPN1-208	ENST00000557702	C9orf131	Q5VYM1	1079 aa		13.64	□□□□□ -0.23
PABPN1-208	ENST00000557702	ZCRB1	Q8TBF4	217 aa	Known RBP	13.64	□□□□□ -0.23
PABPN1-208	ENST00000557702	RRAGC	Q9HB90	399 aa		13.64	□□□□□ -0.23
PABPN1-208	ENST00000557702	EVC2	Q86UK5	1308 aa		13.64	□□□□□ -0.23
PABPN1-208	ENST00000557702	PLEKHG2	Q9H7P9	1386 aa		13.63	□□□□□ -0.23
PABPN1-208	ENST00000557702	PHF14	O94880	888 aa		13.63	□□□□□ -0.23
PABPN1-208	ENST00000557702	TGFB2	P61812	414 aa		13.63	□□□□□ -0.23
PABPN1-208	ENST00000557702	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.62	□□□□□ -0.23
PABPN1-208	ENST00000557702	KTN1	Q86UP2	1357 aa	Known RBP	13.61	□□□□□ -0.23
PABPN1-208	ENST00000557702		A0A0G2JLW4	131 aa		13.61	□□□□□ -0.23
PABPN1-208	ENST00000557702	FCHSD2	O94868	740 aa		13.61	□□□□□ -0.23
PABPN1-208	ENST00000557702	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PABPN1-208	ENST00000557702	USP31	Q70CQ4	1352 aa		13.6	□□□□□ -0.23
PABPN1-208	ENST00000557702	C10orf71	Q711Q0	1435 aa		13.6	□□□□□ -0.23
PABPN1-208	ENST00000557702	AMIGO3	Q86WK7	504 aa		13.6	□□□□□ -0.23
PABPN1-208	ENST00000557702	DOT1L	Q8TEK3	1739 aa		13.6	□□□□□ -0.23
PABPN1-208	ENST00000557702	LTV1	Q96GA3	475 aa	Predicted RBP	13.6	□□□□□ -0.23
PABPN1-208	ENST00000557702	NSD3	Q9BZ95	1437 aa		13.6	□□□□□ -0.23
PABPN1-208	ENST00000557702	PXDNL	A1KZ92	1463 aa		13.6	□□□□□ -0.23
PABPN1-208	ENST00000557702	MMP10	P09238	476 aa		13.59	□□□□□ -0.23
PABPN1-208	ENST00000557702	SSFA2	P28290	1259 aa		13.59	□□□□□ -0.23
PABPN1-208	ENST00000557702	SMIM5	Q71RC9	77 aa		13.59	□□□□□ -0.23
PABPN1-208	ENST00000557702	IP6K1	Q92551	441 aa		13.59	□□□□□ -0.23
PABPN1-208	ENST00000557702	C5	P01031	1676 aa		13.59	□□□□□ -0.23
PABPN1-208	ENST00000557702	KCP	Q6ZWJ8	1503 aa		13.59	□□□□□ -0.23
PABPN1-208	ENST00000557702	PALLD	Q8WX93	1383 aa		13.58	□□□□□ -0.23
PABPN1-208	ENST00000557702	FAM161A	Q3B820	660 aa		13.58	□□□□□ -0.24
PABPN1-208	ENST00000557702	NME9	Q86XW9	330 aa		13.57	□□□□□ -0.24
PABPN1-208	ENST00000557702	SMARCC1	Q92922	1105 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPN1-208	ENST00000557702	PRDM10	Q9NQV6	1147 aa		13.57	□□□□□ -0.24
PABPN1-208	ENST00000557702	RNF181	Q9P0P0	153 aa		13.57	□□□□□ -0.24
PABPN1-208	ENST00000557702	USP54	Q70EL1	1684 aa		13.56	□□□□□ -0.24
PABPN1-208	ENST00000557702	KIAA1210	Q9ULL0	1709 aa		13.56	□□□□□ -0.24
PABPN1-208	ENST00000557702	DPEP1	P16444	411 aa		13.56	□□□□□ -0.24
PABPN1-208	ENST00000557702	MPRIP	Q6WCQ1	1025 aa		13.56	□□□□□ -0.24
PABPN1-208	ENST00000557702	LTN1	O94822	1766 aa		13.55	□□□□□ -0.24
PABPN1-208	ENST00000557702	C4B	P0C0L5	1744 aa		13.54	□□□□□ -0.24
PABPN1-208	ENST00000557702	TAF1L	Q8IZX4	1826 aa		13.54	□□□□□ -0.24
PABPN1-208	ENST00000557702	FOXN1	O15353	648 aa		13.53	□□□□□ -0.24
PABPN1-208	ENST00000557702	VEGFA	P15692	232 aa	Predicted RBP	13.53	□□□□□ -0.24
PABPN1-208	ENST00000557702	CCDC87	Q9NVE4	849 aa		13.53	□□□□□ -0.24
PABPN1-208	ENST00000557702	CGNL1	Q0VF96	1302 aa		13.53	□□□□□ -0.24
PABPN1-208	ENST00000557702	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.53	□□□□□ -0.24
PABPN1-208	ENST00000557702	NLGN1	Q8N2Q7	840 aa		13.52	□□□□□ -0.25
PABPN1-208	ENST00000557702	PIM2	Q9P1W9	311 aa		13.52	□□□□□ -0.25
PABPN1-208	ENST00000557702	UBR3	Q6ZT12	1888 aa		13.51	□□□□□ -0.25
PABPN1-208	ENST00000557702	MEGF6	O75095	1541 aa		13.51	□□□□□ -0.25
PABPN1-208	ENST00000557702	GNPAT	O15228	680 aa		13.51	□□□□□ -0.25
PABPN1-208	ENST00000557702	TMF1	P82094	1093 aa		13.51	□□□□□ -0.25
PABPN1-208	ENST00000557702	DALRD3	Q5D0E6	543 aa	Known RBP	13.51	□□□□□ -0.25
PABPN1-208	ENST00000557702	RAPGEF4	Q8WZA2	1011 aa		13.51	□□□□□ -0.25
PABPN1-208	ENST00000557702	DCAF5	Q96JK2	942 aa		13.51	□□□□□ -0.25
PABPN1-208	ENST00000557702	KIF13B	Q9NQT8	1826 aa		13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	KCNA3	P22001	575 aa		13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	CTCF	P49711	727 aa	Predicted RBP	13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	MLLT1	Q03111	559 aa	Predicted RBP	13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	LINC00116	Q8NCU8	138 aa		13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	AIDA	Q96BJ3	306 aa		13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	MKRN1	Q9UHC7	482 aa	Known RBP	13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	TOGARAM1	Q9Y4F4	1720 aa		13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	FAM208A	Q9UK61	1670 aa	Known RBP	13.5	□□□□□ -0.25
PABPN1-208	ENST00000557702	RAB3GAP2	Q9H2M9	1393 aa		13.49	□□□□□ -0.25
PABPN1-208	ENST00000557702	SBNO2	Q9Y2G9	1366 aa		13.49	□□□□□ -0.25
PABPN1-208	ENST00000557702	LOC102724428	A0A0B4J2F2	783 aa		13.49	□□□□□ -0.25
PABPN1-208	ENST00000557702	TAT	P17735	454 aa	Predicted RBP	13.49	□□□□□ -0.25
PABPN1-208	ENST00000557702	AMPH	P49418	695 aa		13.49	□□□□□ -0.25
PABPN1-208	ENST00000557702	SIK1	P57059	783 aa		13.49	□□□□□ -0.25
PABPN1-208	ENST00000557702	ABHD8	Q96I13	439 aa		13.49	□□□□□ -0.25
PABPN1-208	ENST00000557702	CREBZF	Q9NS37	354 aa		13.49	□□□□□ -0.25
PABPN1-208	ENST00000557702	KIAA1551	Q9HCM1	1747 aa		13.48	□□□□□ -0.25
PABPN1-208	ENST00000557702	PCDH11X	Q9BZA7	1347 aa		13.48	□□□□□ -0.25
PABPN1-208	ENST00000557702	PCDH11Y	Q9BZA8	1340 aa		13.48	□□□□□ -0.25
PABPN1-208	ENST00000557702	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.48	□□□□□ -0.25
PABPN1-208	ENST00000557702	GLTPD2	A6NH11	291 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms