RNA–Protein interactions for RNA: ENST00000557682.6

LINC01578-209, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 2,683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-209ENST00000557682 BMP2KLQ5H9B9 411 aa28.69■■■□□ 2.18
LINC01578-209ENST00000557682 EYA1Q99502 592 aa28.69■■■□□ 2.18
LINC01578-209ENST00000557682 CRB1P82279 1406 aa28.69■■■□□ 2.18
LINC01578-209ENST00000557682 CEP170BQ9Y4F5 1589 aaPredicted RBP28.69■■■□□ 2.18
LINC01578-209ENST00000557682 ARHGAP23Q9P227 1491 aa28.68■■■□□ 2.18
LINC01578-209ENST00000557682 MSH6P52701 1360 aa28.68■■■□□ 2.18
LINC01578-209ENST00000557682 SLIT1O75093 1534 aa28.68■■■□□ 2.18
LINC01578-209ENST00000557682 APBB1O00213 710 aa28.67■■■□□ 2.18
LINC01578-209ENST00000557682 C16orf71Q8IYS4 520 aaPredicted RBP28.67■■■□□ 2.18
LINC01578-209ENST00000557682 NLRP6P59044 892 aa28.67■■■□□ 2.18
LINC01578-209ENST00000557682 CHMP4BQ9H444 224 aaKnown RBP28.66■■■□□ 2.18
LINC01578-209ENST00000557682 G2E3Q7L622 706 aa28.66■■■□□ 2.18
LINC01578-209ENST00000557682 FLT4P35916 1363 aa28.66■■■□□ 2.18
LINC01578-209ENST00000557682 SLC4A2P04920 1241 aa28.66■■■□□ 2.18
LINC01578-209ENST00000557682 TBC1D9Q6ZT07 1266 aa28.66■■■□□ 2.18
LINC01578-209ENST00000557682 MEIS3Q99687 375 aa28.66■■■□□ 2.18
LINC01578-209ENST00000557682 INTS3Q68E01 1043 aaKnown RBP28.65■■■□□ 2.18
LINC01578-209ENST00000557682 PIK3C2AO00443 1686 aa28.65■■■□□ 2.18
LINC01578-209ENST00000557682 TTC21AQ8NDW8 1320 aa28.65■■■□□ 2.18
LINC01578-209ENST00000557682 F6X3S4 739 aa28.65■■■□□ 2.18
LINC01578-209ENST00000557682 OTUD7AQ8TE49 926 aaPredicted RBP28.65■■■□□ 2.18
LINC01578-209ENST00000557682 LTV1Q96GA3 475 aaPredicted RBP28.65■■■□□ 2.18
LINC01578-209ENST00000557682 L1TD1Q5T7N2 865 aaKnown RBP28.64■■■□□ 2.18
LINC01578-209ENST00000557682 TSPYL4Q9UJ04 414 aa28.64■■■□□ 2.18
LINC01578-209ENST00000557682 SBNO1A3KN83 1393 aa28.64■■■□□ 2.18
LINC01578-209ENST00000557682 FMN2Q9NZ56 1722 aa28.64■■■□□ 2.18
LINC01578-209ENST00000557682 ARHGEF10O15013 1369 aa28.64■■■□□ 2.17
LINC01578-209ENST00000557682 ATP10DQ9P241 1426 aa28.63■■■□□ 2.17
LINC01578-209ENST00000557682 GSPT1P15170 499 aaKnown RBP28.63■■■□□ 2.17
LINC01578-209ENST00000557682 THEMISQ8N1K5 641 aaPredicted RBP28.63■■■□□ 2.17
LINC01578-209ENST00000557682 FER1L4A9Z1Z3 1794 aa28.62■■■□□ 2.17
LINC01578-209ENST00000557682 RTF1Q92541 710 aaKnown RBP28.62■■■□□ 2.17
LINC01578-209ENST00000557682 NECTIN2Q92692 538 aa28.61■■■□□ 2.17
LINC01578-209ENST00000557682 SMARCA5O60264 1052 aaPredicted RBP28.61■■■□□ 2.17
LINC01578-209ENST00000557682 SLC4A10Q6U841 1118 aa28.61■■■□□ 2.17
LINC01578-209ENST00000557682 KIAA0232Q92628 1395 aa28.6■■■□□ 2.17
LINC01578-209ENST00000557682 RBM25P49756 843 aaKnown RBP28.6■■■□□ 2.17
LINC01578-209ENST00000557682 CEP85Q6P2H3 762 aa28.59■■■□□ 2.17
LINC01578-209ENST00000557682 C14orf37Q86TY3 774 aa28.59■■■□□ 2.17
LINC01578-209ENST00000557682 PLEKHM2Q8IWE5 1019 aa28.59■■■□□ 2.17
LINC01578-209ENST00000557682 DCTPP1Q9H773 170 aa28.59■■■□□ 2.17
LINC01578-209ENST00000557682 KIF2CQ99661 725 aa28.59■■■□□ 2.17
LINC01578-209ENST00000557682 RBM42Q9BTD8 480 aaKnown RBP28.59■■■□□ 2.17
LINC01578-209ENST00000557682 IGSF1Q8N6C5 1336 aa28.59■■■□□ 2.17
LINC01578-209ENST00000557682 CD2BP2O95400 341 aaKnown RBP28.58■■■□□ 2.17
LINC01578-209ENST00000557682 HSCBQ8IWL3 235 aa28.58■■■□□ 2.17
LINC01578-209ENST00000557682 USHBP1Q8N6Y0 703 aa28.58■■■□□ 2.17
LINC01578-209ENST00000557682 ANKRD44Q8N8A2 993 aa28.57■■■□□ 2.16
LINC01578-209ENST00000557682 RTL1A6NKG5 1358 aa28.57■■■□□ 2.16
LINC01578-209ENST00000557682 KDRP35968 1356 aa28.57■■■□□ 2.16
LINC01578-209ENST00000557682 ABTB2Q8N961 1025 aa28.56■■■□□ 2.16
LINC01578-209ENST00000557682 UBE2Q2Q8WVN8 375 aa28.56■■■□□ 2.16
LINC01578-209ENST00000557682 HOXC9P31274 260 aa28.55■■■□□ 2.16
LINC01578-209ENST00000557682 PLEKHG5O94827 1062 aa28.54■■■□□ 2.16
LINC01578-209ENST00000557682 FOXD4L1Q9NU39 408 aa28.54■■■□□ 2.16
LINC01578-209ENST00000557682 XRN1Q8IZH2 1706 aaKnown RBP28.54■■■□□ 2.16
LINC01578-209ENST00000557682 KIF24Q5T7B8 1368 aa28.53■■■□□ 2.16
LINC01578-209ENST00000557682 PTPRCP08575 1304 aa28.53■■■□□ 2.16
LINC01578-209ENST00000557682 HAP1P54257 671 aaPredicted RBP28.51■■■□□ 2.15
LINC01578-209ENST00000557682 ARXQ96QS3 562 aa28.5■■■□□ 2.15
LINC01578-209ENST00000557682 RRAGDQ9NQL2 400 aaPredicted RBP28.5■■■□□ 2.15
LINC01578-209ENST00000557682 MARF1Q9Y4F3 1742 aaKnown RBP28.49■■■□□ 2.15
LINC01578-209ENST00000557682 CDC45O75419 566 aa28.49■■■□□ 2.15
LINC01578-209ENST00000557682 GAS2L2Q8NHY3 880 aa28.49■■■□□ 2.15
LINC01578-209ENST00000557682 CHMP5Q9NZZ3 219 aa28.49■■■□□ 2.15
LINC01578-209ENST00000557682 TTC22Q5TAA0 569 aa28.49■■■□□ 2.15
LINC01578-209ENST00000557682 ZBTB7CA1YPR0 619 aa28.48■■■□□ 2.15
LINC01578-209ENST00000557682 RPAP2Q8IXW5 612 aaPredicted RBP28.48■■■□□ 2.15
LINC01578-209ENST00000557682 IL17REQ8NFR9 667 aa28.48■■■□□ 2.15
LINC01578-209ENST00000557682 TRHP20396 242 aaPredicted RBP28.47■■■□□ 2.15
LINC01578-209ENST00000557682 MCM4P33991 863 aa28.47■■■□□ 2.15
LINC01578-209ENST00000557682 GZF1Q9H116 711 aaPredicted RBP28.46■■■□□ 2.15
LINC01578-209ENST00000557682 NWD1Q149M9 1564 aa28.46■■■□□ 2.15
LINC01578-209ENST00000557682 GNAT3A8MTJ3 354 aa28.46■■■□□ 2.15
LINC01578-209ENST00000557682 GOLGA6L3A6NEY3 463 aa28.46■■■□□ 2.15
LINC01578-209ENST00000557682 HSP90AB1P08238 724 aaKnown RBP28.45■■■□□ 2.14
LINC01578-209ENST00000557682 SETD1BQ9UPS6 1966 aaKnown RBP28.45■■■□□ 2.14
LINC01578-209ENST00000557682 SNX21Q969T3 373 aa28.44■■■□□ 2.14
LINC01578-209ENST00000557682 NCOA3Q9Y6Q9 1424 aa28.44■■■□□ 2.14
LINC01578-209ENST00000557682 FKBP5Q13451 457 aaPredicted RBP28.43■■■□□ 2.14
LINC01578-209ENST00000557682 TSHZ3Q63HK5 1081 aa28.43■■■□□ 2.14
LINC01578-209ENST00000557682 XRCC6P12956 609 aaKnown RBP eCLIP28.43■■■□□ 2.146e-7■□□□□ 8.7
LINC01578-209ENST00000557682 ANKARQ7Z5J8 1434 aa28.42■■■□□ 2.14
LINC01578-209ENST00000557682 EXOC6BQ9Y2D4 811 aa28.42■■■□□ 2.14
LINC01578-209ENST00000557682 SDSP20132 328 aa28.42■■■□□ 2.14
LINC01578-209ENST00000557682 DDIT3P35638 169 aa28.42■■■□□ 2.14
LINC01578-209ENST00000557682 FLIIQ13045 1269 aa28.42■■■□□ 2.14
LINC01578-209ENST00000557682 STK31Q9BXU1 1019 aa28.42■■■□□ 2.14
LINC01578-209ENST00000557682 PHF8Q9UPP1 1060 aa28.41■■■□□ 2.14
LINC01578-209ENST00000557682 FSD2A1L4K1 749 aa28.4■■■□□ 2.14
LINC01578-209ENST00000557682 XPCQ01831 940 aaPredicted RBP28.39■■■□□ 2.14
LINC01578-209ENST00000557682 MAP3K5Q99683 1374 aa28.39■■■□□ 2.13
LINC01578-209ENST00000557682 LRRC37A3O60309 1634 aa28.37■■■□□ 2.13
LINC01578-209ENST00000557682 CCT4P50991 539 aaKnown RBP28.37■■■□□ 2.13
LINC01578-209ENST00000557682 PNMA6EA0A0J9YXQ4 647 aa28.36■■■□□ 2.13
LINC01578-209ENST00000557682 HSP90AA1P07900 732 aaKnown RBP28.36■■■□□ 2.13
LINC01578-209ENST00000557682 ESCO1Q5FWF5 840 aa28.36■■■□□ 2.13
LINC01578-209ENST00000557682 NBPF6Q5VWK0 638 aa28.36■■■□□ 2.13
LINC01578-209ENST00000557682 NBPF4Q96M43 638 aa28.36■■■□□ 2.13
LINC01578-209ENST00000557682 CCDC30Q5VVM6 783 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms