RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 LY75O60449 1722 aa10.51□□□□□ -0.73
PRKCH-225ENST00000557559 ANKRD36BQ8N2N9 1353 aa10.51□□□□□ -0.73
PRKCH-225ENST00000557559 ATP10DQ9P241 1426 aa10.5□□□□□ -0.73
PRKCH-225ENST00000557559 DOT1LQ8TEK3 1739 aa10.5□□□□□ -0.73
PRKCH-225ENST00000557559 NLGN2Q8NFZ4 835 aa10.5□□□□□ -0.73
PRKCH-225ENST00000557559 ANKRD24Q8TF21 1146 aa10.5□□□□□ -0.73
PRKCH-225ENST00000557559 ROCK2O75116 1388 aaKnown RBP10.5□□□□□ -0.73
PRKCH-225ENST00000557559 GPBP1L1Q9HC44 474 aaPredicted RBP10.49□□□□□ -0.73
PRKCH-225ENST00000557559 SBNO2Q9Y2G9 1366 aa10.49□□□□□ -0.73
PRKCH-225ENST00000557559 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
PRKCH-225ENST00000557559 KAT6BQ8WYB5 2073 aa10.48□□□□□ -0.73
PRKCH-225ENST00000557559 SYTL4Q96C24 671 aaPredicted RBP10.48□□□□□ -0.73
PRKCH-225ENST00000557559 YBX3P16989 372 aaKnown RBP eCLIP10.47□□□□□ -0.73
PRKCH-225ENST00000557559 HSPA6P17066 643 aa10.47□□□□□ -0.73
PRKCH-225ENST00000557559 HDGFL2Q7Z4V5 671 aaPredicted RBP10.47□□□□□ -0.73
PRKCH-225ENST00000557559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.73
PRKCH-225ENST00000557559 ADCY9O60503 1353 aa10.47□□□□□ -0.73
PRKCH-225ENST00000557559 C5P01031 1676 aa10.47□□□□□ -0.73
PRKCH-225ENST00000557559 DDX54Q8TDD1 881 aaKnown RBP10.46□□□□□ -0.73
PRKCH-225ENST00000557559 CCNL1Q9UK58 526 aaPredicted RBP10.46□□□□□ -0.73
PRKCH-225ENST00000557559 CD2APQ9Y5K6 639 aa10.46□□□□□ -0.73
PRKCH-225ENST00000557559 USP47Q96K76 1375 aa10.46□□□□□ -0.74
PRKCH-225ENST00000557559 CD163L1Q9NR16 1453 aa10.45□□□□□ -0.74
PRKCH-225ENST00000557559 NSD3Q9BZ95 1437 aa10.45□□□□□ -0.74
PRKCH-225ENST00000557559 NSD2O96028 1365 aa10.45□□□□□ -0.74
PRKCH-225ENST00000557559 NME9Q86XW9 330 aa10.45□□□□□ -0.74
PRKCH-225ENST00000557559 FLAD1Q8NFF5 587 aa10.45□□□□□ -0.74
PRKCH-225ENST00000557559 PRIM1P49642 420 aaKnown RBP10.44□□□□□ -0.74
PRKCH-225ENST00000557559 C1QBPQ07021 282 aaKnown RBP10.44□□□□□ -0.74
PRKCH-225ENST00000557559 TERF2IPQ9NYB0 399 aa10.44□□□□□ -0.74
PRKCH-225ENST00000557559 CGNL1Q0VF96 1302 aa10.43□□□□□ -0.74
PRKCH-225ENST00000557559 IP6K1Q92551 441 aa10.43□□□□□ -0.74
PRKCH-225ENST00000557559 SMG6Q86US8 1419 aaKnown RBP10.42□□□□□ -0.74
PRKCH-225ENST00000557559 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
PRKCH-225ENST00000557559 ATXN8OSP0DMR3 200 aa10.42□□□□□ -0.74
PRKCH-225ENST00000557559 COL23A1Q86Y22 540 aaPredicted RBP10.42□□□□□ -0.74
PRKCH-225ENST00000557559 ZCRB1Q8TBF4 217 aaKnown RBP10.42□□□□□ -0.74
PRKCH-225ENST00000557559 L3MBTL2Q969R5 705 aa10.42□□□□□ -0.74
PRKCH-225ENST00000557559 MEGF6O75095 1541 aa10.42□□□□□ -0.74
PRKCH-225ENST00000557559 A0A1W2PP64 1363 aa10.41□□□□□ -0.74
PRKCH-225ENST00000557559 CICQ96RK0 1608 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-225ENST00000557559 KCNQ4P56696 695 aa10.41□□□□□ -0.74
PRKCH-225ENST00000557559 MSL1Q68DK7 614 aa10.41□□□□□ -0.74
PRKCH-225ENST00000557559 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-225ENST00000557559 TMC1Q8TDI8 760 aa10.41□□□□□ -0.74
PRKCH-225ENST00000557559 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.74
PRKCH-225ENST00000557559 ZNF526Q8TF50 670 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-225ENST00000557559 LTV1Q96GA3 475 aaPredicted RBP10.4□□□□□ -0.74
PRKCH-225ENST00000557559 C4BP0C0L5 1744 aa10.4□□□□□ -0.74
PRKCH-225ENST00000557559 PCDH11XQ9BZA7 1347 aa10.39□□□□□ -0.75
PRKCH-225ENST00000557559 PCDH11YQ9BZA8 1340 aa10.39□□□□□ -0.75
PRKCH-225ENST00000557559 APLP1P51693 650 aa10.39□□□□□ -0.75
PRKCH-225ENST00000557559 COG3Q96JB2 828 aa10.39□□□□□ -0.75
PRKCH-225ENST00000557559 PUS7Q96PZ0 661 aaKnown RBP10.39□□□□□ -0.75
PRKCH-225ENST00000557559 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
PRKCH-225ENST00000557559 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
PRKCH-225ENST00000557559 HOXC9P31274 260 aa10.38□□□□□ -0.75
PRKCH-225ENST00000557559 AMPHP49418 695 aa10.38□□□□□ -0.75
PRKCH-225ENST00000557559 RAPGEF4Q8WZA2 1011 aa10.38□□□□□ -0.75
PRKCH-225ENST00000557559 AK7Q96M32 723 aa10.38□□□□□ -0.75
PRKCH-225ENST00000557559 MAP3K19Q56UN5 1328 aa10.37□□□□□ -0.75
PRKCH-225ENST00000557559 RGPD2P0DJD1 1756 aa10.37□□□□□ -0.75
PRKCH-225ENST00000557559 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-225ENST00000557559 UBR3Q6ZT12 1888 aa10.36□□□□□ -0.75
PRKCH-225ENST00000557559 TOGARAM1Q9Y4F4 1720 aa10.36□□□□□ -0.75
PRKCH-225ENST00000557559 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
PRKCH-225ENST00000557559 KIF3CO14782 793 aa10.35□□□□□ -0.75
PRKCH-225ENST00000557559 TATP17735 454 aaPredicted RBP10.35□□□□□ -0.75
PRKCH-225ENST00000557559 SSFA2P28290 1259 aa10.35□□□□□ -0.75
PRKCH-225ENST00000557559 CARD11Q9BXL7 1154 aa10.35□□□□□ -0.75
PRKCH-225ENST00000557559 PKD1L3Q7Z443 1732 aa10.34□□□□□ -0.75
PRKCH-225ENST00000557559 WDR90Q96KV7 1748 aa10.34□□□□□ -0.75
PRKCH-225ENST00000557559 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
PRKCH-225ENST00000557559 TOMM70O94826 608 aa10.34□□□□□ -0.75
PRKCH-225ENST00000557559 KIF24Q5T7B8 1368 aa10.34□□□□□ -0.75
PRKCH-225ENST00000557559 MPRIPQ6WCQ1 1025 aa10.33□□□□□ -0.76
PRKCH-225ENST00000557559 SPINK5Q9NQ38 1064 aaPredicted RBP10.33□□□□□ -0.76
PRKCH-225ENST00000557559 PLEKHG2Q9H7P9 1386 aa10.33□□□□□ -0.76
PRKCH-225ENST00000557559 ITGB4P16144 1822 aa10.33□□□□□ -0.76
PRKCH-225ENST00000557559 KIF13BQ9NQT8 1826 aa10.33□□□□□ -0.76
PRKCH-225ENST00000557559 INSRP06213 1382 aa10.32□□□□□ -0.76
PRKCH-225ENST00000557559 FLT4P35916 1363 aa10.32□□□□□ -0.76
PRKCH-225ENST00000557559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
PRKCH-225ENST00000557559 PHF14O94880 888 aa10.32□□□□□ -0.76
PRKCH-225ENST00000557559 NBPF6Q5VWK0 638 aa10.32□□□□□ -0.76
PRKCH-225ENST00000557559 NBPF4Q96M43 638 aa10.32□□□□□ -0.76
PRKCH-225ENST00000557559 PXDNLA1KZ92 1463 aa10.31□□□□□ -0.76
PRKCH-225ENST00000557559 TGFB2P61812 414 aa10.3□□□□□ -0.76
PRKCH-225ENST00000557559 NEUROD1Q13562 356 aa10.3□□□□□ -0.76
PRKCH-225ENST00000557559 C16orf71Q8IYS4 520 aaPredicted RBP10.3□□□□□ -0.76
PRKCH-225ENST00000557559 USHBP1Q8N6Y0 703 aa10.3□□□□□ -0.76
PRKCH-225ENST00000557559 C10orf71Q711Q0 1435 aa10.3□□□□□ -0.76
PRKCH-225ENST00000557559 MAP2P11137 1827 aaKnown RBP10.3□□□□□ -0.76
PRKCH-225ENST00000557559 KIF20BQ96Q89 1820 aa10.3□□□□□ -0.76
PRKCH-225ENST00000557559 KIAA1551Q9HCM1 1747 aa10.3□□□□□ -0.76
PRKCH-225ENST00000557559 LOC102724428A0A0B4J2F2 783 aa10.29□□□□□ -0.76
PRKCH-225ENST00000557559 GNPATO15228 680 aa10.29□□□□□ -0.76
PRKCH-225ENST00000557559 SIK1P57059 783 aa10.29□□□□□ -0.76
PRKCH-225ENST00000557559 RRS1Q15050 365 aaKnown RBP10.29□□□□□ -0.76
PRKCH-225ENST00000557559 DNAJC5GQ8N7S2 189 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms