RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 FBLN1P23142 703 aa12.78□□□□□ -0.36
NPC2-209ENST00000557510 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
NPC2-209ENST00000557510 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
NPC2-209ENST00000557510 TXNRD1Q16881 649 aa12.77□□□□□ -0.37
NPC2-209ENST00000557510 MYOM1P52179 1685 aa12.77□□□□□ -0.37
NPC2-209ENST00000557510 IL2RBP14784 551 aa12.76□□□□□ -0.37
NPC2-209ENST00000557510 PUS7Q96PZ0 661 aaKnown RBP12.76□□□□□ -0.37
NPC2-209ENST00000557510 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
NPC2-209ENST00000557510 PAPPAQ13219 1627 aa12.76□□□□□ -0.37
NPC2-209ENST00000557510 FAM208AQ9UK61 1670 aaKnown RBP12.76□□□□□ -0.37
NPC2-209ENST00000557510 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
NPC2-209ENST00000557510 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
NPC2-209ENST00000557510 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
NPC2-209ENST00000557510 LTV1Q96GA3 475 aaPredicted RBP12.75□□□□□ -0.37
NPC2-209ENST00000557510 MAP3K19Q56UN5 1328 aa12.74□□□□□ -0.37
NPC2-209ENST00000557510 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
NPC2-209ENST00000557510 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
NPC2-209ENST00000557510 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
NPC2-209ENST00000557510 IP6K1Q92551 441 aa12.74□□□□□ -0.37
NPC2-209ENST00000557510 NINLQ9Y2I6 1382 aa12.73□□□□□ -0.37
NPC2-209ENST00000557510 MIER1Q8N108 512 aa12.73□□□□□ -0.37
NPC2-209ENST00000557510 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
NPC2-209ENST00000557510 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
NPC2-209ENST00000557510 ANKRD36BQ8N2N9 1353 aa12.72□□□□□ -0.37
NPC2-209ENST00000557510 USP47Q96K76 1375 aa12.72□□□□□ -0.37
NPC2-209ENST00000557510 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
NPC2-209ENST00000557510 HOXC9P31274 260 aa12.72□□□□□ -0.37
NPC2-209ENST00000557510 PTGER2P43116 358 aa12.72□□□□□ -0.37
NPC2-209ENST00000557510 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
NPC2-209ENST00000557510 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
NPC2-209ENST00000557510 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
NPC2-209ENST00000557510 COG3Q96JB2 828 aa12.71□□□□□ -0.37
NPC2-209ENST00000557510 STK32BQ9NY57 414 aa12.71□□□□□ -0.37
NPC2-209ENST00000557510 MEGF6O75095 1541 aa12.71□□□□□ -0.38
NPC2-209ENST00000557510 TUBGCP6Q96RT7 1819 aa12.71□□□□□ -0.38
NPC2-209ENST00000557510 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
NPC2-209ENST00000557510 ZNF827Q17R98 1081 aa12.7□□□□□ -0.38
NPC2-209ENST00000557510 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
NPC2-209ENST00000557510 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
NPC2-209ENST00000557510 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
NPC2-209ENST00000557510 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
NPC2-209ENST00000557510 FYB1O15117 783 aa12.69□□□□□ -0.38
NPC2-209ENST00000557510 AMPHP49418 695 aa12.68□□□□□ -0.38
NPC2-209ENST00000557510 KCNQ4P56696 695 aa12.68□□□□□ -0.38
NPC2-209ENST00000557510 LY75O60449 1722 aa12.68□□□□□ -0.38
NPC2-209ENST00000557510 NSD2O96028 1365 aa12.68□□□□□ -0.38
NPC2-209ENST00000557510 TMF1P82094 1093 aa12.67□□□□□ -0.38
NPC2-209ENST00000557510 NBPF6Q5VWK0 638 aa12.67□□□□□ -0.38
NPC2-209ENST00000557510 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
NPC2-209ENST00000557510 NBPF4Q96M43 638 aa12.67□□□□□ -0.38
NPC2-209ENST00000557510 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
NPC2-209ENST00000557510 QSER1Q2KHR3 1735 aa12.66□□□□□ -0.38
NPC2-209ENST00000557510 YY1P25490 414 aa12.66□□□□□ -0.38
NPC2-209ENST00000557510 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
NPC2-209ENST00000557510 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
NPC2-209ENST00000557510 CARD14Q9BXL6 1004 aa12.65□□□□□ -0.38
NPC2-209ENST00000557510 FHDC1Q9C0D6 1143 aaPredicted RBP12.65□□□□□ -0.38
NPC2-209ENST00000557510 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
NPC2-209ENST00000557510 HSP90AB2PQ58FF8 381 aa12.64□□□□□ -0.39
NPC2-209ENST00000557510 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
NPC2-209ENST00000557510 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
NPC2-209ENST00000557510 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
NPC2-209ENST00000557510 COL24A1Q17RW2 1714 aa12.64□□□□□ -0.39
NPC2-209ENST00000557510 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
NPC2-209ENST00000557510 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
NPC2-209ENST00000557510 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
NPC2-209ENST00000557510 MAP2P11137 1827 aaKnown RBP12.62□□□□□ -0.39
NPC2-209ENST00000557510 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
NPC2-209ENST00000557510 UTRNP46939 3433 aa12.62□□□□□ -0.39
NPC2-209ENST00000557510 ITGB4P16144 1822 aa12.62□□□□□ -0.39
NPC2-209ENST00000557510 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
NPC2-209ENST00000557510 INSRP06213 1382 aa12.61□□□□□ -0.39
NPC2-209ENST00000557510 CHD4Q14839 1912 aa12.61□□□□□ -0.39
NPC2-209ENST00000557510 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
NPC2-209ENST00000557510 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
NPC2-209ENST00000557510 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
NPC2-209ENST00000557510 FLT4P35916 1363 aa12.6□□□□□ -0.39
NPC2-209ENST00000557510 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
NPC2-209ENST00000557510 ARXQ96QS3 562 aa12.6□□□□□ -0.39
NPC2-209ENST00000557510 SMG6Q86US8 1419 aaKnown RBP12.6□□□□□ -0.39
NPC2-209ENST00000557510 C5P01031 1676 aa12.6□□□□□ -0.39
NPC2-209ENST00000557510 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
NPC2-209ENST00000557510 CYP27B1O15528 508 aa12.58□□□□□ -0.4
NPC2-209ENST00000557510 CDCA8Q53HL2 280 aa12.58□□□□□ -0.4
NPC2-209ENST00000557510 RAPGEF4Q8WZA2 1011 aa12.58□□□□□ -0.4
NPC2-209ENST00000557510 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
NPC2-209ENST00000557510 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
NPC2-209ENST00000557510 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
NPC2-209ENST00000557510 CGNL1Q0VF96 1302 aa12.57□□□□□ -0.4
NPC2-209ENST00000557510 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
NPC2-209ENST00000557510 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
NPC2-209ENST00000557510 NCAPD2Q15021 1401 aa12.56□□□□□ -0.4
NPC2-209ENST00000557510 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
NPC2-209ENST00000557510 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
NPC2-209ENST00000557510 PPM1GO15355 546 aaPredicted RBP12.55□□□□□ -0.4
NPC2-209ENST00000557510 COL23A1Q86Y22 540 aaPredicted RBP12.55□□□□□ -0.4
NPC2-209ENST00000557510 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
NPC2-209ENST00000557510 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
NPC2-209ENST00000557510 NLGN2Q8NFZ4 835 aa12.54□□□□□ -0.4
NPC2-209ENST00000557510 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms