RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 USHBP1Q8N6Y0 703 aa19.88■□□□□ 0.77
SLIRP-210ENST00000557431 COG3Q96JB2 828 aa19.88■□□□□ 0.77
SLIRP-210ENST00000557431 ARXQ96QS3 562 aa19.88■□□□□ 0.77
SLIRP-210ENST00000557431 NSD2O96028 1365 aa19.87■□□□□ 0.77
SLIRP-210ENST00000557431 AKT1S1Q96B36 256 aa19.87■□□□□ 0.77
SLIRP-210ENST00000557431 C5P01031 1676 aa19.87■□□□□ 0.77
SLIRP-210ENST00000557431 PNPLA7Q6ZV29 1317 aa19.86■□□□□ 0.77
SLIRP-210ENST00000557431 TOGARAM1Q9Y4F4 1720 aa19.86■□□□□ 0.77
SLIRP-210ENST00000557431 PRIM1P49642 420 aaKnown RBP19.86■□□□□ 0.77
SLIRP-210ENST00000557431 ZNF784Q8NCA9 323 aaPredicted RBP19.85■□□□□ 0.77
SLIRP-210ENST00000557431 GGNBP2Q9H3C7 697 aa19.85■□□□□ 0.77
SLIRP-210ENST00000557431 ANKRD36BQ8N2N9 1353 aa19.83■□□□□ 0.77
SLIRP-210ENST00000557431 MAP2P11137 1827 aaKnown RBP19.83■□□□□ 0.77
SLIRP-210ENST00000557431 PUS7Q96PZ0 661 aaKnown RBP19.83■□□□□ 0.77
SLIRP-210ENST00000557431 ZCRB1Q8TBF4 217 aaKnown RBP19.82■□□□□ 0.76
SLIRP-210ENST00000557431 NBPF6Q5VWK0 638 aa19.81■□□□□ 0.76
SLIRP-210ENST00000557431 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
SLIRP-210ENST00000557431 NBPF4Q96M43 638 aa19.81■□□□□ 0.76
SLIRP-210ENST00000557431 SLC27A3Q5K4L6 730 aa19.8■□□□□ 0.76
SLIRP-210ENST00000557431 TFCP2L1Q9NZI6 479 aa19.8■□□□□ 0.76
SLIRP-210ENST00000557431 FYB1O15117 783 aa19.79■□□□□ 0.76
SLIRP-210ENST00000557431 USP47Q96K76 1375 aa19.79■□□□□ 0.76
SLIRP-210ENST00000557431 MAP3K5Q99683 1374 aa19.79■□□□□ 0.76
SLIRP-210ENST00000557431 PKD1L3Q7Z443 1732 aa19.79■□□□□ 0.76
SLIRP-210ENST00000557431 NLGN2Q8NFZ4 835 aa19.78■□□□□ 0.76
SLIRP-210ENST00000557431 CCNL1Q9UK58 526 aaPredicted RBP19.78■□□□□ 0.76
SLIRP-210ENST00000557431 RTL1A6NKG5 1358 aa19.78■□□□□ 0.76
SLIRP-210ENST00000557431 GPR162Q16538 588 aa19.77■□□□□ 0.76
SLIRP-210ENST00000557431 UBR3Q6ZT12 1888 aa19.77■□□□□ 0.76
SLIRP-210ENST00000557431 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
SLIRP-210ENST00000557431 MSL1Q68DK7 614 aa19.76■□□□□ 0.75
SLIRP-210ENST00000557431 MSH5O43196 834 aa19.75■□□□□ 0.75
SLIRP-210ENST00000557431 POLD1P28340 1107 aa19.75■□□□□ 0.75
SLIRP-210ENST00000557431 ANKRD26Q9UPS8 1709 aa19.75■□□□□ 0.75
SLIRP-210ENST00000557431 SMG6Q86US8 1419 aaKnown RBP19.75■□□□□ 0.75
SLIRP-210ENST00000557431 TMF1P82094 1093 aa19.74■□□□□ 0.75
SLIRP-210ENST00000557431 COL23A1Q86Y22 540 aaPredicted RBP19.74■□□□□ 0.75
SLIRP-210ENST00000557431 SLC16A10Q8TF71 515 aa19.74■□□□□ 0.75
SLIRP-210ENST00000557431 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
SLIRP-210ENST00000557431 RAPGEF4Q8WZA2 1011 aa19.73■□□□□ 0.75
SLIRP-210ENST00000557431 TATP17735 454 aaPredicted RBP19.72■□□□□ 0.75
SLIRP-210ENST00000557431 EMILIN1Q9Y6C2 1016 aa19.72■□□□□ 0.75
SLIRP-210ENST00000557431 INSRP06213 1382 aa19.7■□□□□ 0.74
SLIRP-210ENST00000557431 NSD3Q9BZ95 1437 aa19.7■□□□□ 0.74
SLIRP-210ENST00000557431 SMIM5Q71RC9 77 aa19.7■□□□□ 0.74
SLIRP-210ENST00000557431 FLT4P35916 1363 aa19.7■□□□□ 0.74
SLIRP-210ENST00000557431 CYP27B1O15528 508 aa19.69■□□□□ 0.74
SLIRP-210ENST00000557431 MPRIPQ6WCQ1 1025 aa19.69■□□□□ 0.74
SLIRP-210ENST00000557431 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
SLIRP-210ENST00000557431 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
SLIRP-210ENST00000557431 SENP3-EIF4A1A0A087X0R7 540 aa19.68■□□□□ 0.74
SLIRP-210ENST00000557431 YBX3P16989 372 aaKnown RBP eCLIP19.68■□□□□ 0.74
SLIRP-210ENST00000557431 PCDH11XQ9BZA7 1347 aa19.68■□□□□ 0.74
SLIRP-210ENST00000557431 PCDH11YQ9BZA8 1340 aa19.68■□□□□ 0.74
SLIRP-210ENST00000557431 GOLGB1Q14789 3259 aaKnown RBP19.67■□□□□ 0.74
SLIRP-210ENST00000557431 AMIGO3Q86WK7 504 aa19.67■□□□□ 0.74
SLIRP-210ENST00000557431 PPM1GO15355 546 aaPredicted RBP19.66■□□□□ 0.74
SLIRP-210ENST00000557431 CGNL1Q0VF96 1302 aa19.66■□□□□ 0.74
SLIRP-210ENST00000557431 C1QTNF8P60827 252 aa19.65■□□□□ 0.74
SLIRP-210ENST00000557431 SLC24A1O60721 1099 aa19.64■□□□□ 0.73
SLIRP-210ENST00000557431 WWC3Q9ULE0 1092 aa19.64■□□□□ 0.73
SLIRP-210ENST00000557431 PHF14O94880 888 aa19.62■□□□□ 0.73
SLIRP-210ENST00000557431 POLR3GLQ9BT43 218 aa19.62■□□□□ 0.73
SLIRP-210ENST00000557431 NCAPD2Q15021 1401 aa19.61■□□□□ 0.73
SLIRP-210ENST00000557431 N4BP2Q86UW6 1770 aaPredicted RBP19.6■□□□□ 0.73
SLIRP-210ENST00000557431 KIF24Q5T7B8 1368 aa19.6■□□□□ 0.73
SLIRP-210ENST00000557431 PIGBQ92521 554 aa19.6■□□□□ 0.73
SLIRP-210ENST00000557431 GIGYF1O75420 1035 aaPredicted RBP19.59■□□□□ 0.73
SLIRP-210ENST00000557431 VIRMAQ69YN4 1812 aaKnown RBP19.58■□□□□ 0.73
SLIRP-210ENST00000557431 CDCA8Q53HL2 280 aa19.58■□□□□ 0.72
SLIRP-210ENST00000557431 AK7Q96M32 723 aa19.58■□□□□ 0.72
SLIRP-210ENST00000557431 EYA1Q99502 592 aa19.58■□□□□ 0.72
SLIRP-210ENST00000557431 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
SLIRP-210ENST00000557431 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
SLIRP-210ENST00000557431 LINC00116Q8NCU8 138 aa19.57■□□□□ 0.72
SLIRP-210ENST00000557431 KIAA1551Q9HCM1 1747 aa19.56■□□□□ 0.72
SLIRP-210ENST00000557431 MYH14Q7Z406 1995 aaKnown RBP19.56■□□□□ 0.72
SLIRP-210ENST00000557431 COL5A3P25940 1745 aaPredicted RBP19.56■□□□□ 0.72
SLIRP-210ENST00000557431 SMARCC1Q92922 1105 aaPredicted RBP19.55■□□□□ 0.72
SLIRP-210ENST00000557431 ATP10DQ9P241 1426 aa19.55■□□□□ 0.72
SLIRP-210ENST00000557431 ASAP1Q9ULH1 1129 aa19.55■□□□□ 0.72
SLIRP-210ENST00000557431 KIF13BQ9NQT8 1826 aa19.54■□□□□ 0.72
SLIRP-210ENST00000557431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.54■□□□□ 0.72
SLIRP-210ENST00000557431 ITPK1Q13572 414 aa19.54■□□□□ 0.72
SLIRP-210ENST00000557431 POLKQ9UBT6 870 aa19.54■□□□□ 0.72
SLIRP-210ENST00000557431 C4AP0C0L4 1744 aa19.54■□□□□ 0.72
SLIRP-210ENST00000557431 WASHC2AQ641Q2 1341 aa19.53■□□□□ 0.72
SLIRP-210ENST00000557431 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
SLIRP-210ENST00000557431 GRIN3BO60391 1043 aa19.53■□□□□ 0.72
SLIRP-210ENST00000557431 SIK1P57059 783 aa19.53■□□□□ 0.72
SLIRP-210ENST00000557431 FLAD1Q8NFF5 587 aa19.53■□□□□ 0.72
SLIRP-210ENST00000557431 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
SLIRP-210ENST00000557431 NKX1-1Q15270 411 aaPredicted RBP19.52■□□□□ 0.72
SLIRP-210ENST00000557431 TMOD3Q9NYL9 352 aa19.52■□□□□ 0.72
SLIRP-210ENST00000557431 CD2APQ9Y5K6 639 aa19.52■□□□□ 0.72
SLIRP-210ENST00000557431 IGSF1Q8N6C5 1336 aa19.51■□□□□ 0.71
SLIRP-210ENST00000557431 PHKG2P15735 406 aa19.51■□□□□ 0.71
SLIRP-210ENST00000557431 EIF4A2Q14240 407 aaKnown RBP19.51■□□□□ 0.71
SLIRP-210ENST00000557431 ZNF526Q8TF50 670 aaPredicted RBP19.51■□□□□ 0.71
SLIRP-210ENST00000557431 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms