RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 MAN1A2O60476 641 aa7.62□□□□□ -1.19
CHD8-212ENST00000557329 ERVK-9P63128 1117 aa7.62□□□□□ -1.19
CHD8-212ENST00000557329 SUZ12Q15022 739 aaKnown RBP7.62□□□□□ -1.19
CHD8-212ENST00000557329 LINC00528Q8N1L1 170 aa7.62□□□□□ -1.19
CHD8-212ENST00000557329 FNBP4Q8N3X1 1017 aaPredicted RBP7.62□□□□□ -1.19
CHD8-212ENST00000557329 POM121Q96HA1 1249 aa7.62□□□□□ -1.19
CHD8-212ENST00000557329 CHIC2Q9UKJ5 165 aa7.62□□□□□ -1.19
CHD8-212ENST00000557329 PPFIA3O75145 1194 aa7.61□□□□□ -1.19
CHD8-212ENST00000557329 ADH1AP07327 375 aa7.61□□□□□ -1.19
CHD8-212ENST00000557329 RAB15P59190 212 aa7.61□□□□□ -1.19
CHD8-212ENST00000557329 PHTF2Q8N3S3 785 aa7.61□□□□□ -1.19
CHD8-212ENST00000557329 ZNF784Q8NCA9 323 aaPredicted RBP7.61□□□□□ -1.19
CHD8-212ENST00000557329 ZFAND3Q9H8U3 227 aa7.61□□□□□ -1.19
CHD8-212ENST00000557329 DOLKQ9UPQ8 538 aa7.61□□□□□ -1.19
CHD8-212ENST00000557329 PCDHB11Q9Y5F2 797 aa7.61□□□□□ -1.19
CHD8-212ENST00000557329 BMP2P12643 396 aa7.6□□□□□ -1.19
CHD8-212ENST00000557329 GSK3AP49840 483 aa7.6□□□□□ -1.19
CHD8-212ENST00000557329 CLUAP1Q96AJ1 413 aa7.6□□□□□ -1.19
CHD8-212ENST00000557329 ATP5J2-PTCD1G3V325 749 aa7.59□□□□□ -1.19
CHD8-212ENST00000557329 C6orf118Q5T5N4 469 aa7.59□□□□□ -1.19
CHD8-212ENST00000557329 ZMYND15Q9H091 742 aa7.59□□□□□ -1.19
CHD8-212ENST00000557329 SPINT1O43278 529 aa7.58□□□□□ -1.2
CHD8-212ENST00000557329 LILRA1O75019 489 aa7.58□□□□□ -1.2
CHD8-212ENST00000557329 GNRH1P01148 92 aa7.58□□□□□ -1.2
CHD8-212ENST00000557329 GPC1P35052 558 aa7.58□□□□□ -1.2
CHD8-212ENST00000557329 ESCO1Q5FWF5 840 aa7.58□□□□□ -1.2
CHD8-212ENST00000557329 TMPRSS4Q9NRS4 437 aa7.58□□□□□ -1.2
CHD8-212ENST00000557329 TRAK2O60296 914 aa7.57□□□□□ -1.2
CHD8-212ENST00000557329 PTGIRP43119 386 aa7.57□□□□□ -1.2
CHD8-212ENST00000557329 EML3Q32P44 896 aa7.57□□□□□ -1.2
CHD8-212ENST00000557329 HDGFL1Q5TGJ6 251 aa7.57□□□□□ -1.2
CHD8-212ENST00000557329 KCTD17Q8N5Z5 321 aa7.57□□□□□ -1.2
CHD8-212ENST00000557329 PLPP7Q8NBV4 271 aa7.57□□□□□ -1.2
CHD8-212ENST00000557329 CYLDQ9NQC7 956 aa7.57□□□□□ -1.2
CHD8-212ENST00000557329 SOS2Q07890 1332 aaPredicted RBP7.56□□□□□ -1.2
CHD8-212ENST00000557329 TRIM50Q86XT4 487 aa7.56□□□□□ -1.2
CHD8-212ENST00000557329 TMEM151AQ8N4L1 468 aa7.56□□□□□ -1.2
CHD8-212ENST00000557329 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
CHD8-212ENST00000557329 CBLBQ13191 982 aa7.55□□□□□ -1.2
CHD8-212ENST00000557329 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.55□□□□□ -1.2
CHD8-212ENST00000557329 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
CHD8-212ENST00000557329 GLMNQ92990 594 aa7.55□□□□□ -1.2
CHD8-212ENST00000557329 DNMT3LQ9UJW3 386 aa7.55□□□□□ -1.2
CHD8-212ENST00000557329 NOD1Q9Y239 953 aa7.55□□□□□ -1.2
CHD8-212ENST00000557329 CECR2Q9BXF3 1484 aa7.55□□□□□ -1.2
CHD8-212ENST00000557329 TTLL8A6PVC2 850 aa7.54□□□□□ -1.2
CHD8-212ENST00000557329 RNF225M0QZC1 329 aaPredicted RBP7.54□□□□□ -1.2
CHD8-212ENST00000557329 SKIP12755 728 aa7.54□□□□□ -1.2
CHD8-212ENST00000557329 GTF2E1P29083 439 aaPredicted RBP7.54□□□□□ -1.2
CHD8-212ENST00000557329 ATP1A2P50993 1020 aa7.54□□□□□ -1.2
CHD8-212ENST00000557329 NLRP3Q96P20 1036 aa7.54□□□□□ -1.2
CHD8-212ENST00000557329 CCDC85AQ96PX6 553 aaPredicted RBP7.54□□□□□ -1.2
CHD8-212ENST00000557329 ATP9BO43861 1147 aa7.53□□□□□ -1.2
CHD8-212ENST00000557329 RASSF7Q02833 373 aa7.53□□□□□ -1.2
CHD8-212ENST00000557329 NACADO15069 1562 aa7.52□□□□□ -1.21
CHD8-212ENST00000557329 GDF11O95390 407 aa7.52□□□□□ -1.21
CHD8-212ENST00000557329 ADD1P35611 737 aaKnown RBP7.52□□□□□ -1.21
CHD8-212ENST00000557329 RNF144AP50876 292 aaPredicted RBP7.52□□□□□ -1.21
CHD8-212ENST00000557329 RELBQ01201 579 aa7.52□□□□□ -1.21
CHD8-212ENST00000557329 KRT76Q01546 638 aa7.52□□□□□ -1.21
CHD8-212ENST00000557329 CLN3Q13286 438 aa7.52□□□□□ -1.21
CHD8-212ENST00000557329 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
CHD8-212ENST00000557329 OSBPL3Q9H4L5 887 aa7.52□□□□□ -1.21
CHD8-212ENST00000557329 POLMQ9NP87 494 aaPredicted RBP7.52□□□□□ -1.21
CHD8-212ENST00000557329 POM121CA8CG34 1229 aa7.51□□□□□ -1.21
CHD8-212ENST00000557329 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
CHD8-212ENST00000557329 WASLO00401 505 aaPredicted RBP7.51□□□□□ -1.21
CHD8-212ENST00000557329 WDR44Q5JSH3 913 aa7.51□□□□□ -1.21
CHD8-212ENST00000557329 GPR161Q8N6U8 529 aaKnown RBP7.51□□□□□ -1.21
CHD8-212ENST00000557329 NANOS1Q8WY41 292 aaKnown RBP7.51□□□□□ -1.21
CHD8-212ENST00000557329 CNTNAP3BQ96NU0 1288 aa7.51□□□□□ -1.21
CHD8-212ENST00000557329 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
CHD8-212ENST00000557329 ADAMTS8Q9UP79 889 aa7.51□□□□□ -1.21
CHD8-212ENST00000557329 A0A1W2PRU2 124 aa7.5□□□□□ -1.21
CHD8-212ENST00000557329 BACH1O14867 736 aa7.5□□□□□ -1.21
CHD8-212ENST00000557329 C14orf37Q86TY3 774 aa7.5□□□□□ -1.21
CHD8-212ENST00000557329 ESYT1Q9BSJ8 1104 aa7.5□□□□□ -1.21
CHD8-212ENST00000557329 RBM19Q9Y4C8 960 aaKnown RBP7.5□□□□□ -1.21
CHD8-212ENST00000557329 SCTRP47872 440 aa7.49□□□□□ -1.21
CHD8-212ENST00000557329 PTSQ03393 145 aa7.49□□□□□ -1.21
CHD8-212ENST00000557329 AGBL1Q96MI9 1066 aa7.49□□□□□ -1.21
CHD8-212ENST00000557329 CDCA7Q9BWT1 371 aaPredicted RBP7.49□□□□□ -1.21
CHD8-212ENST00000557329 ZNF395Q9H8N7 513 aaPredicted RBP7.49□□□□□ -1.21
CHD8-212ENST00000557329 SLC27A3Q5K4L6 730 aa7.48□□□□□ -1.21
CHD8-212ENST00000557329 LYSMD3Q7Z3D4 306 aa7.48□□□□□ -1.21
CHD8-212ENST00000557329 XAGE2Q96GT9 111 aa7.48□□□□□ -1.21
CHD8-212ENST00000557329 INSM2Q96T92 566 aaPredicted RBP7.48□□□□□ -1.21
CHD8-212ENST00000557329 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
CHD8-212ENST00000557329 UNC13AQ9UPW8 1703 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 USP17L3A6NCW0 530 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 USP17L4A6NCW7 530 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 MEN1O00255 615 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 NCOA4Q13772 614 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 USP17L2Q6R6M4 530 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 USP17L1Q7RTZ2 530 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 LARGE2Q8N3Y3 721 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 NBPF15Q8N660 670 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 KDF1Q8NAX2 398 aaPredicted RBP7.47□□□□□ -1.21
CHD8-212ENST00000557329 ADAMTS19Q8TE59 1207 aa7.47□□□□□ -1.21
CHD8-212ENST00000557329 CNKSR1Q969H4 720 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1431 ms