RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 DDX54Q8TDD1 881 aaKnown RBP15.08■□□□□ 0
HNRNPC-230ENST00000557201 MAP3K5Q99683 1374 aa15.07■□□□□ 0
HNRNPC-230ENST00000557201 SHANK3Q9BYB0 1731 aa15.07■□□□□ 0
HNRNPC-230ENST00000557201 MEGF6O75095 1541 aa15.07■□□□□ 0
HNRNPC-230ENST00000557201 FYB1O15117 783 aa15.07■□□□□ 0
HNRNPC-230ENST00000557201 SLC27A3Q5K4L6 730 aa15.07■□□□□ 0
HNRNPC-230ENST00000557201 RTL1A6NKG5 1358 aa15.06■□□□□ 0
HNRNPC-230ENST00000557201 COL24A1Q17RW2 1714 aa15.06■□□□□ 0
HNRNPC-230ENST00000557201 QSER1Q2KHR3 1735 aa15.06■□□□□ 0
HNRNPC-230ENST00000557201 RGPD2P0DJD1 1756 aa15.05■□□□□ 0
HNRNPC-230ENST00000557201 AMPHP49418 695 aa15.05■□□□□ -0
HNRNPC-230ENST00000557201 PRIM1P49642 420 aaKnown RBP15.05■□□□□ -0
HNRNPC-230ENST00000557201 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
HNRNPC-230ENST00000557201 ARXQ96QS3 562 aa15.05■□□□□ -0
HNRNPC-230ENST00000557201 RRS1Q15050 365 aaKnown RBP15.04■□□□□ -0
HNRNPC-230ENST00000557201 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
HNRNPC-230ENST00000557201 ZCRB1Q8TBF4 217 aaKnown RBP15.04■□□□□ -0
HNRNPC-230ENST00000557201 NBPF4Q96M43 638 aa15.04■□□□□ -0
HNRNPC-230ENST00000557201 DOT1LQ8TEK3 1739 aa15.04■□□□□ -0
HNRNPC-230ENST00000557201 PNPLA7Q6ZV29 1317 aa15.03■□□□□ -0
HNRNPC-230ENST00000557201 SLC16A10Q8TF71 515 aa15.03■□□□□ -0
HNRNPC-230ENST00000557201 GGNBP2Q9H3C7 697 aa15.03■□□□□ -0
HNRNPC-230ENST00000557201 LY75O60449 1722 aa15.03■□□□□ -0
HNRNPC-230ENST00000557201 USP47Q96K76 1375 aa15.03■□□□□ -0
HNRNPC-230ENST00000557201 KCNQ4P56696 695 aa15.02■□□□□ -0
HNRNPC-230ENST00000557201 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
HNRNPC-230ENST00000557201 TMF1P82094 1093 aa15.01□□□□□ -0.01
HNRNPC-230ENST00000557201 ZNF784Q8NCA9 323 aaPredicted RBP15.01□□□□□ -0.01
HNRNPC-230ENST00000557201 TUBGCP6Q96RT7 1819 aa15.01□□□□□ -0.01
HNRNPC-230ENST00000557201 CGNL1Q0VF96 1302 aa15.01□□□□□ -0.01
HNRNPC-230ENST00000557201 INSRP06213 1382 aa15□□□□□ -0.01
HNRNPC-230ENST00000557201 SYTL4Q96C24 671 aaPredicted RBP15□□□□□ -0.01
HNRNPC-230ENST00000557201 KIF24Q5T7B8 1368 aa15□□□□□ -0.01
HNRNPC-230ENST00000557201 USHBP1Q8N6Y0 703 aa14.99□□□□□ -0.01
HNRNPC-230ENST00000557201 HSP90AB2PQ58FF8 381 aa14.98□□□□□ -0.01
HNRNPC-230ENST00000557201 CARD14Q9BXL6 1004 aa14.98□□□□□ -0.01
HNRNPC-230ENST00000557201 RNF216Q9NWF9 866 aaPredicted RBP14.98□□□□□ -0.01
HNRNPC-230ENST00000557201 TFCP2L1Q9NZI6 479 aa14.98□□□□□ -0.01
HNRNPC-230ENST00000557201 TIMELESSQ9UNS1 1208 aa14.98□□□□□ -0.01
HNRNPC-230ENST00000557201 FLT4P35916 1363 aa14.97□□□□□ -0.01
HNRNPC-230ENST00000557201 SMG6Q86US8 1419 aaKnown RBP14.97□□□□□ -0.01
HNRNPC-230ENST00000557201 CCNL1Q9UK58 526 aaPredicted RBP14.97□□□□□ -0.01
HNRNPC-230ENST00000557201 KIF20BQ96Q89 1820 aa14.96□□□□□ -0.01
HNRNPC-230ENST00000557201 NCAPD2Q15021 1401 aa14.96□□□□□ -0.01
HNRNPC-230ENST00000557201 RAPGEF4Q8WZA2 1011 aa14.96□□□□□ -0.02
HNRNPC-230ENST00000557201 CHD4Q14839 1912 aa14.96□□□□□ -0.02
HNRNPC-230ENST00000557201 CYP27B1O15528 508 aa14.95□□□□□ -0.02
HNRNPC-230ENST00000557201 TATP17735 454 aaPredicted RBP14.95□□□□□ -0.02
HNRNPC-230ENST00000557201 POLD1P28340 1107 aa14.95□□□□□ -0.02
HNRNPC-230ENST00000557201 CDCA8Q53HL2 280 aa14.95□□□□□ -0.02
HNRNPC-230ENST00000557201 COL23A1Q86Y22 540 aaPredicted RBP14.95□□□□□ -0.02
HNRNPC-230ENST00000557201 GOLGB1Q14789 3259 aaKnown RBP14.95□□□□□ -0.02
HNRNPC-230ENST00000557201 PCDH11XQ9BZA7 1347 aa14.94□□□□□ -0.02
HNRNPC-230ENST00000557201 PCDH11YQ9BZA8 1340 aa14.94□□□□□ -0.02
HNRNPC-230ENST00000557201 NLGN2Q8NFZ4 835 aa14.93□□□□□ -0.02
HNRNPC-230ENST00000557201 EMILIN1Q9Y6C2 1016 aa14.93□□□□□ -0.02
HNRNPC-230ENST00000557201 NSD3Q9BZ95 1437 aa14.93□□□□□ -0.02
HNRNPC-230ENST00000557201 PKD1L3Q7Z443 1732 aa14.92□□□□□ -0.02
HNRNPC-230ENST00000557201 ANKRD26Q9UPS8 1709 aa14.92□□□□□ -0.02
HNRNPC-230ENST00000557201 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
HNRNPC-230ENST00000557201 GPR162Q16538 588 aa14.92□□□□□ -0.02
HNRNPC-230ENST00000557201 C5P01031 1676 aa14.91□□□□□ -0.02
HNRNPC-230ENST00000557201 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
HNRNPC-230ENST00000557201 PALLDQ8WX93 1383 aa14.91□□□□□ -0.02
HNRNPC-230ENST00000557201 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
HNRNPC-230ENST00000557201 WASHC2AQ641Q2 1341 aa14.89□□□□□ -0.03
HNRNPC-230ENST00000557201 KLHL34Q8N239 644 aa14.89□□□□□ -0.03
HNRNPC-230ENST00000557201 YBX3P16989 372 aaKnown RBP eCLIP14.88□□□□□ -0.03
HNRNPC-230ENST00000557201 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-230ENST00000557201 MPRIPQ6WCQ1 1025 aa14.88□□□□□ -0.03
HNRNPC-230ENST00000557201 AMIGO3Q86WK7 504 aa14.88□□□□□ -0.03
HNRNPC-230ENST00000557201 ITGB4P16144 1822 aa14.88□□□□□ -0.03
HNRNPC-230ENST00000557201 PIGBQ92521 554 aa14.87□□□□□ -0.03
HNRNPC-230ENST00000557201 MAP2P11137 1827 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-230ENST00000557201 C4BP0C0L5 1744 aa14.87□□□□□ -0.03
HNRNPC-230ENST00000557201 HMGB2P26583 209 aaKnown RBP14.86□□□□□ -0.03
HNRNPC-230ENST00000557201 MSL1Q68DK7 614 aa14.86□□□□□ -0.03
HNRNPC-230ENST00000557201 FLAD1Q8NFF5 587 aa14.86□□□□□ -0.03
HNRNPC-230ENST00000557201 SMARCC1Q92922 1105 aaPredicted RBP14.86□□□□□ -0.03
HNRNPC-230ENST00000557201 EYA1Q99502 592 aa14.86□□□□□ -0.03
HNRNPC-230ENST00000557201 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.86□□□□□ -0.034e-12■■■□□ 16.5
HNRNPC-230ENST00000557201 POLKQ9UBT6 870 aa14.86□□□□□ -0.03
HNRNPC-230ENST00000557201 C1QTNF8P60827 252 aa14.85□□□□□ -0.03
HNRNPC-230ENST00000557201 CD2APQ9Y5K6 639 aa14.85□□□□□ -0.03
HNRNPC-230ENST00000557201 UBR3Q6ZT12 1888 aa14.84□□□□□ -0.03
HNRNPC-230ENST00000557201 PPM1GO15355 546 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-230ENST00000557201 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
HNRNPC-230ENST00000557201 SPG7Q9UQ90 795 aa14.84□□□□□ -0.03
HNRNPC-230ENST00000557201 GRIN3BO60391 1043 aa14.83□□□□□ -0.04
HNRNPC-230ENST00000557201 PLEKHG2Q9H7P9 1386 aa14.82□□□□□ -0.04
HNRNPC-230ENST00000557201 LOC102724428A0A0B4J2F2 783 aa14.82□□□□□ -0.04
HNRNPC-230ENST00000557201 PHKG2P15735 406 aa14.82□□□□□ -0.04
HNRNPC-230ENST00000557201 SIK1P57059 783 aa14.82□□□□□ -0.04
HNRNPC-230ENST00000557201 SMIM5Q71RC9 77 aa14.82□□□□□ -0.04
HNRNPC-230ENST00000557201 LINC00116Q8NCU8 138 aa14.82□□□□□ -0.04
HNRNPC-230ENST00000557201 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.81□□□□□ -0.04
HNRNPC-230ENST00000557201 EIF4A2Q14240 407 aaKnown RBP14.81□□□□□ -0.04
HNRNPC-230ENST00000557201 AK7Q96M32 723 aa14.81□□□□□ -0.04
HNRNPC-230ENST00000557201 ASAP1Q9ULH1 1129 aa14.81□□□□□ -0.04
HNRNPC-230ENST00000557201 SSFA2P28290 1259 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms