RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ZNF511Q8NB15 262 aa7.94□□□□□ -1.14
SCFD1-223ENST00000557076 BAP1Q92560 729 aa7.94□□□□□ -1.14
SCFD1-223ENST00000557076 TBC1D2Q9BYX2 928 aa7.94□□□□□ -1.14
SCFD1-223ENST00000557076 CTTNBP2Q8WZ74 1663 aa7.93□□□□□ -1.14
SCFD1-223ENST00000557076 RANGAP1P46060 587 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-223ENST00000557076 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
SCFD1-223ENST00000557076 RSBN1LQ6PCB5 846 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-223ENST00000557076 SRCAPQ6ZRS2 3230 aa7.93□□□□□ -1.14
SCFD1-223ENST00000557076 MLH3Q9UHC1 1453 aa7.93□□□□□ -1.14
SCFD1-223ENST00000557076 MED1Q15648 1581 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-223ENST00000557076 PARP9Q8IXQ6 854 aa7.92□□□□□ -1.14
SCFD1-223ENST00000557076 ZBTB3Q9H5J0 574 aa7.92□□□□□ -1.14
SCFD1-223ENST00000557076 PLA2R1Q13018 1463 aa7.92□□□□□ -1.14
SCFD1-223ENST00000557076 AGLP35573 1532 aa7.92□□□□□ -1.14
SCFD1-223ENST00000557076 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
SCFD1-223ENST00000557076 LYPD8Q6UX82 237 aa7.91□□□□□ -1.14
SCFD1-223ENST00000557076 STK17AQ9UEE5 414 aa7.91□□□□□ -1.14
SCFD1-223ENST00000557076 TCOF1Q13428 1488 aaKnown RBP7.91□□□□□ -1.14
SCFD1-223ENST00000557076 SAMD9Q5K651 1589 aa7.9□□□□□ -1.14
SCFD1-223ENST00000557076 PTPRKQ15262 1439 aa7.9□□□□□ -1.14
SCFD1-223ENST00000557076 TRIM66O15016 1216 aa7.9□□□□□ -1.14
SCFD1-223ENST00000557076 SPTLC1O15269 473 aa7.9□□□□□ -1.14
SCFD1-223ENST00000557076 CTHP32929 405 aa7.9□□□□□ -1.14
SCFD1-223ENST00000557076 PRPF38BQ5VTL8 546 aaKnown RBP7.9□□□□□ -1.14
SCFD1-223ENST00000557076 SLC16A10Q8TF71 515 aa7.9□□□□□ -1.14
SCFD1-223ENST00000557076 AK7Q96M32 723 aa7.9□□□□□ -1.14
SCFD1-223ENST00000557076 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
SCFD1-223ENST00000557076 REREQ9P2R6 1566 aa7.89□□□□□ -1.15
SCFD1-223ENST00000557076 BMP1P13497 986 aa7.89□□□□□ -1.15
SCFD1-223ENST00000557076 TRIM46Q7Z4K8 759 aa7.89□□□□□ -1.15
SCFD1-223ENST00000557076 NPAS3Q8IXF0 933 aa7.89□□□□□ -1.15
SCFD1-223ENST00000557076 FAM174AQ8TBP5 190 aa7.89□□□□□ -1.15
SCFD1-223ENST00000557076 NXF1Q9UBU9 619 aaKnown RBP7.89□□□□□ -1.15
SCFD1-223ENST00000557076 HRCP23327 699 aa7.88□□□□□ -1.15
SCFD1-223ENST00000557076 POTEAQ6S8J7 498 aa7.88□□□□□ -1.15
SCFD1-223ENST00000557076 RIC3Q7Z5B4 369 aa7.88□□□□□ -1.15
SCFD1-223ENST00000557076 ANKLE2Q86XL3 938 aa7.88□□□□□ -1.15
SCFD1-223ENST00000557076 ATP1B4Q9UN42 357 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-223ENST00000557076 PCDHB15Q9Y5E8 787 aa7.88□□□□□ -1.15
SCFD1-223ENST00000557076 KDM5CP41229 1560 aa7.88□□□□□ -1.15
SCFD1-223ENST00000557076 SHANK2Q9UPX8 1470 aa7.87□□□□□ -1.15
SCFD1-223ENST00000557076 C3P01024 1663 aa7.87□□□□□ -1.15
SCFD1-223ENST00000557076 CFAP99D6REC4 459 aa7.87□□□□□ -1.15
SCFD1-223ENST00000557076 F12P00748 615 aaPredicted RBP7.87□□□□□ -1.15
SCFD1-223ENST00000557076 NNTQ13423 1086 aa7.87□□□□□ -1.15
SCFD1-223ENST00000557076 CPS1P31327 1500 aa7.87□□□□□ -1.15
SCFD1-223ENST00000557076 ADH1CP00326 375 aa7.86□□□□□ -1.15
SCFD1-223ENST00000557076 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
SCFD1-223ENST00000557076 GGT6Q6P531 493 aa7.86□□□□□ -1.15
SCFD1-223ENST00000557076 THEMISQ8N1K5 641 aaPredicted RBP7.86□□□□□ -1.15
SCFD1-223ENST00000557076 SCARF1Q14162 830 aa7.85□□□□□ -1.15
SCFD1-223ENST00000557076 TUSC1Q2TAM9 212 aa7.85□□□□□ -1.15
SCFD1-223ENST00000557076 MAP10Q9P2G4 905 aa7.85□□□□□ -1.15
SCFD1-223ENST00000557076 DIP2CQ9Y2E4 1556 aa7.84□□□□□ -1.15
SCFD1-223ENST00000557076 SPAG9O60271 1321 aaKnown RBP7.84□□□□□ -1.15
SCFD1-223ENST00000557076 TIMP2P16035 220 aa7.84□□□□□ -1.15
SCFD1-223ENST00000557076 WDR4P57081 412 aaKnown RBP7.84□□□□□ -1.15
SCFD1-223ENST00000557076 MRPL14Q6P1L8 145 aaKnown RBP7.84□□□□□ -1.15
SCFD1-223ENST00000557076 IRF7Q92985 503 aa7.84□□□□□ -1.15
SCFD1-223ENST00000557076 ZFP42Q96MM3 310 aa7.84□□□□□ -1.15
SCFD1-223ENST00000557076 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
SCFD1-223ENST00000557076 ARHGAP5Q13017 1502 aa7.83□□□□□ -1.16
SCFD1-223ENST00000557076 BPHLQ86WA6 291 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-223ENST00000557076 CABLES1Q8TDN4 633 aa7.83□□□□□ -1.16
SCFD1-223ENST00000557076 TROQ12816 1431 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-223ENST00000557076 CDK13Q14004 1512 aaKnown RBP7.83□□□□□ -1.16
SCFD1-223ENST00000557076 PDE4DQ08499 809 aa7.82□□□□□ -1.16
SCFD1-223ENST00000557076 NR5A1Q13285 461 aa7.82□□□□□ -1.16
SCFD1-223ENST00000557076 CSPP1Q1MSJ5 1256 aa7.82□□□□□ -1.16
SCFD1-223ENST00000557076 MYSM1Q5VVJ2 828 aa7.82□□□□□ -1.16
SCFD1-223ENST00000557076 FBXO31Q5XUX0 539 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-223ENST00000557076 ARMC2Q8NEN0 867 aa7.82□□□□□ -1.16
SCFD1-223ENST00000557076 FOXJ1Q92949 421 aa7.82□□□□□ -1.16
SCFD1-223ENST00000557076 A2ML1A8K2U0 1454 aa7.81□□□□□ -1.16
SCFD1-223ENST00000557076 CLIP1P30622 1438 aa7.81□□□□□ -1.16
SCFD1-223ENST00000557076 FAM181BA6NEQ2 426 aa7.81□□□□□ -1.16
SCFD1-223ENST00000557076 NUTM2BA6NNL0 878 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-223ENST00000557076 NUTM2EB1AL46 878 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-223ENST00000557076 HNRNPMP52272 730 aaKnown RBP eCLIP7.81□□□□□ -1.161e-6■■■□□ 16.6
SCFD1-223ENST00000557076 AGERQ15109 404 aa7.81□□□□□ -1.16
SCFD1-223ENST00000557076 NUTM2DQ5VT03 806 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-223ENST00000557076 NUTM2AQ8IVF1 878 aaPredicted RBP7.81□□□□□ -1.16
SCFD1-223ENST00000557076 TSC1Q92574 1164 aa7.81□□□□□ -1.16
SCFD1-223ENST00000557076 FMN1Q68DA7 1419 aa7.8□□□□□ -1.16
SCFD1-223ENST00000557076 H3BM21 787 aa7.8□□□□□ -1.16
SCFD1-223ENST00000557076 ARID5BQ14865 1188 aa7.8□□□□□ -1.16
SCFD1-223ENST00000557076 HELBQ8NG08 1087 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-223ENST00000557076 KLF16Q9BXK1 252 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-223ENST00000557076 LIMD1Q9UGP4 676 aa7.8□□□□□ -1.16
SCFD1-223ENST00000557076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.8□□□□□ -1.16
SCFD1-223ENST00000557076 CEP170BQ9Y4F5 1589 aaPredicted RBP7.8□□□□□ -1.16
SCFD1-223ENST00000557076 FAM135BQ49AJ0 1406 aa7.79□□□□□ -1.16
SCFD1-223ENST00000557076 ABCA6Q8N139 1617 aa7.79□□□□□ -1.16
SCFD1-223ENST00000557076 ALKQ9UM73 1620 aa7.79□□□□□ -1.16
SCFD1-223ENST00000557076 PER1O15534 1290 aaPredicted RBP7.79□□□□□ -1.16
SCFD1-223ENST00000557076 SLC24A1O60721 1099 aa7.79□□□□□ -1.16
SCFD1-223ENST00000557076 LILRB3O75022 631 aa7.79□□□□□ -1.16
SCFD1-223ENST00000557076 NBPF14Q5TI25 921 aa7.79□□□□□ -1.16
SCFD1-223ENST00000557076 PURBQ96QR8 312 aaKnown RBP7.79□□□□□ -1.16
SCFD1-223ENST00000557076 ZNF777Q9ULD5 760 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms