RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 PTCH1Q13635 1447 aa15.61■□□□□ 0.09
LRP1-212ENST00000556830 PRPF40AO75400 957 aaKnown RBP15.61■□□□□ 0.09
LRP1-212ENST00000556830 PIBF1Q8WXW3 757 aa15.61■□□□□ 0.09
LRP1-212ENST00000556830 KNDC1Q76NI1 1749 aa15.61■□□□□ 0.09
LRP1-212ENST00000556830 PTMAP06454 111 aaKnown RBP15.61■□□□□ 0.09
LRP1-212ENST00000556830 INTS3Q68E01 1043 aaKnown RBP15.61■□□□□ 0.09
LRP1-212ENST00000556830 RBM42Q9BTD8 480 aaKnown RBP15.61■□□□□ 0.09
LRP1-212ENST00000556830 TSPY26PQ9H489 355 aa15.61■□□□□ 0.09
LRP1-212ENST00000556830 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
LRP1-212ENST00000556830 ZBTB7BO15156 539 aaPredicted RBP15.6■□□□□ 0.09
LRP1-212ENST00000556830 CASC1Q6TDU7 716 aa15.6■□□□□ 0.09
LRP1-212ENST00000556830 ANKRD36BQ8N2N9 1353 aa15.6■□□□□ 0.09
LRP1-212ENST00000556830 MCM2P49736 904 aa15.59■□□□□ 0.09
LRP1-212ENST00000556830 USP26Q9BXU7 913 aa15.59■□□□□ 0.09
LRP1-212ENST00000556830 FGD1P98174 961 aa15.59■□□□□ 0.09
LRP1-212ENST00000556830 SLC12A5Q9H2X9 1139 aa15.59■□□□□ 0.09
LRP1-212ENST00000556830 SPTLC3Q9NUV7 552 aa15.59■□□□□ 0.09
LRP1-212ENST00000556830 TMEM63CQ9P1W3 806 aa15.59■□□□□ 0.09
LRP1-212ENST00000556830 DLC1Q96QB1 1528 aa15.58■□□□□ 0.09
LRP1-212ENST00000556830 EVC2Q86UK5 1308 aa15.58■□□□□ 0.09
LRP1-212ENST00000556830 PRAM1Q96QH2 718 aa15.58■□□□□ 0.08
LRP1-212ENST00000556830 KIF3AQ9Y496 699 aa15.58■□□□□ 0.08
LRP1-212ENST00000556830 MINK1Q8N4C8 1332 aaPredicted RBP15.58■□□□□ 0.08
LRP1-212ENST00000556830 COL3A1P02461 1466 aaPredicted RBP15.57■□□□□ 0.08
LRP1-212ENST00000556830 SYCE3A1L190 88 aa15.57■□□□□ 0.08
LRP1-212ENST00000556830 CABP2Q9NPB3 220 aa15.57■□□□□ 0.08
LRP1-212ENST00000556830 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.57■□□□□ 0.08
LRP1-212ENST00000556830 TPM3P06753 285 aa15.57■□□□□ 0.08
LRP1-212ENST00000556830 CEBPAP49715 358 aaPredicted RBP15.57■□□□□ 0.08
LRP1-212ENST00000556830 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
LRP1-212ENST00000556830 REC8O95072 547 aa15.56■□□□□ 0.08
LRP1-212ENST00000556830 DNTTIP2Q5QJE6 756 aaKnown RBP15.56■□□□□ 0.08
LRP1-212ENST00000556830 PIAS4Q8N2W9 510 aaPredicted RBP15.56■□□□□ 0.08
LRP1-212ENST00000556830 DIAPH3Q9NSV4 1193 aa15.56■□□□□ 0.08
LRP1-212ENST00000556830 ANKRD26Q9UPS8 1709 aa15.56■□□□□ 0.08
LRP1-212ENST00000556830 RIMS1Q86UR5 1692 aaKnown RBP15.55■□□□□ 0.08
LRP1-212ENST00000556830 FKBP5Q13451 457 aaPredicted RBP15.55■□□□□ 0.08
LRP1-212ENST00000556830 NOLC1Q14978 699 aaKnown RBP eCLIP15.55■□□□□ 0.08
LRP1-212ENST00000556830 TTC22Q5TAA0 569 aa15.55■□□□□ 0.08
LRP1-212ENST00000556830 ZHX1Q9UKY1 873 aaPredicted RBP15.55■□□□□ 0.08
LRP1-212ENST00000556830 ZDHHC9Q9Y397 364 aa15.55■□□□□ 0.08
LRP1-212ENST00000556830 KIF20BQ96Q89 1820 aa15.55■□□□□ 0.08
LRP1-212ENST00000556830 ZNF710Q8N1W2 664 aa15.54■□□□□ 0.08
LRP1-212ENST00000556830 FEZ1Q99689 392 aa15.54■□□□□ 0.08
LRP1-212ENST00000556830 RBM27Q9P2N5 1060 aaKnown RBP15.54■□□□□ 0.08
LRP1-212ENST00000556830 ABCC4O15439 1325 aa15.54■□□□□ 0.08
LRP1-212ENST00000556830 PLEKHM2Q8IWE5 1019 aa15.54■□□□□ 0.08
LRP1-212ENST00000556830 CDC42BPGQ6DT37 1551 aa15.54■□□□□ 0.08
LRP1-212ENST00000556830 METP08581 1390 aa15.53■□□□□ 0.08
LRP1-212ENST00000556830 TMEM2Q9UHN6 1383 aa15.53■□□□□ 0.08
LRP1-212ENST00000556830 CPS1P31327 1500 aa15.53■□□□□ 0.08
LRP1-212ENST00000556830 GSPT1P15170 499 aaKnown RBP15.53■□□□□ 0.08
LRP1-212ENST00000556830 PPP4R3BQ5MIZ7 849 aa15.53■□□□□ 0.08
LRP1-212ENST00000556830 INTS4Q96HW7 963 aaKnown RBP15.53■□□□□ 0.08
LRP1-212ENST00000556830 PRDM10Q9NQV6 1147 aa15.53■□□□□ 0.08
LRP1-212ENST00000556830 BRD1O95696 1058 aa15.52■□□□□ 0.08
LRP1-212ENST00000556830 CHAF1AQ13111 956 aaPredicted RBP15.52■□□□□ 0.08
LRP1-212ENST00000556830 SRPK2P78362 688 aaKnown RBP15.52■□□□□ 0.07
LRP1-212ENST00000556830 SYCP1Q15431 976 aa15.52■□□□□ 0.07
LRP1-212ENST00000556830 DCTPP1Q9H773 170 aa15.52■□□□□ 0.07
LRP1-212ENST00000556830 A0A1W2PP64 1363 aa15.52■□□□□ 0.07
LRP1-212ENST00000556830 PKP1Q13835 747 aa15.51■□□□□ 0.07
LRP1-212ENST00000556830 MRPL50Q8N5N7 158 aaKnown RBP15.51■□□□□ 0.07
LRP1-212ENST00000556830 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
LRP1-212ENST00000556830 API5Q9BZZ5 524 aaKnown RBP15.51■□□□□ 0.07
LRP1-212ENST00000556830 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
LRP1-212ENST00000556830 CD163L1Q9NR16 1453 aa15.51■□□□□ 0.07
LRP1-212ENST00000556830 A0A0U1RQG5 324 aaPredicted RBP15.5■□□□□ 0.07
LRP1-212ENST00000556830 WAPLQ7Z5K2 1190 aa15.5■□□□□ 0.07
LRP1-212ENST00000556830 CUL4AQ13619 759 aa15.5■□□□□ 0.07
LRP1-212ENST00000556830 SIRT2Q8IXJ6 389 aa15.5■□□□□ 0.07
LRP1-212ENST00000556830 PDCL2Q8N4E4 241 aa15.5■□□□□ 0.07
LRP1-212ENST00000556830 ANKRD7Q92527 254 aa15.5■□□□□ 0.07
LRP1-212ENST00000556830 ADAMTS13Q76LX8 1427 aa15.49■□□□□ 0.07
LRP1-212ENST00000556830 PNPLA6Q8IY17 1366 aa15.49■□□□□ 0.07
LRP1-212ENST00000556830 TMEM87AQ8NBN3 555 aa15.49■□□□□ 0.07
LRP1-212ENST00000556830 AK9Q5TCS8 1911 aa15.49■□□□□ 0.07
LRP1-212ENST00000556830 FCHSD2O94868 740 aa15.48■□□□□ 0.07
LRP1-212ENST00000556830 ZGPATQ8N5A5 531 aaKnown RBP15.48■□□□□ 0.07
LRP1-212ENST00000556830 ADAMTSL3P82987 1691 aa15.48■□□□□ 0.07
LRP1-212ENST00000556830 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
LRP1-212ENST00000556830 ERC2O15083 957 aa15.47■□□□□ 0.07
LRP1-212ENST00000556830 SLIT1O75093 1534 aa15.47■□□□□ 0.07
LRP1-212ENST00000556830 CTIFO43310 598 aaKnown RBP15.47■□□□□ 0.07
LRP1-212ENST00000556830 ANAPC15P60006 121 aa15.47■□□□□ 0.07
LRP1-212ENST00000556830 CBX1P83916 185 aa15.47■□□□□ 0.07
LRP1-212ENST00000556830 GABPB1Q06547 395 aaPredicted RBP15.47■□□□□ 0.07
LRP1-212ENST00000556830 RNF214Q8ND24 703 aa15.47■□□□□ 0.07
LRP1-212ENST00000556830 IL17RAQ96F46 866 aa15.47■□□□□ 0.07
LRP1-212ENST00000556830 BCL2L12Q9HB09 334 aa15.47■□□□□ 0.07
LRP1-212ENST00000556830 TECPR2O15040 1411 aa15.46■□□□□ 0.07
LRP1-212ENST00000556830 VAMP4O75379 141 aa15.46■□□□□ 0.07
LRP1-212ENST00000556830 CCDC183Q5T5S1 534 aa15.46■□□□□ 0.07
LRP1-212ENST00000556830 CDK19Q9BWU1 502 aa15.46■□□□□ 0.07
LRP1-212ENST00000556830 OGFRQ9NZT2 677 aa15.46■□□□□ 0.07
LRP1-212ENST00000556830 ITSN1Q15811 1721 aa15.46■□□□□ 0.07
LRP1-212ENST00000556830 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.46■□□□□ 0.07
LRP1-212ENST00000556830 ARHGAP23Q9P227 1491 aa15.46■□□□□ 0.07
LRP1-212ENST00000556830 EPB41L2O43491 1005 aaKnown RBP15.45■□□□□ 0.06
LRP1-212ENST00000556830 LTKP29376 864 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms