RNA–Protein interactions for RNA: ENST00000556708.1

AC091078.3-201, humanhuman

TSL 2 BASIC

Gene AC091078.3, Length 2,284 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC091078.3-201ENST00000556708 USP19O94966 1318 aa13.95□□□□□ -0.18
AC091078.3-201ENST00000556708 MED1Q15648 1581 aaPredicted RBP13.95□□□□□ -0.18
AC091078.3-201ENST00000556708 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
AC091078.3-201ENST00000556708 KCNH5Q8NCM2 988 aa13.95□□□□□ -0.18
AC091078.3-201ENST00000556708 CRB1P82279 1406 aa13.95□□□□□ -0.18
AC091078.3-201ENST00000556708 ZKSCAN2Q63HK3 967 aa13.94□□□□□ -0.18
AC091078.3-201ENST00000556708 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
AC091078.3-201ENST00000556708 NCOA3Q9Y6Q9 1424 aa13.94□□□□□ -0.18
AC091078.3-201ENST00000556708 CHL1O00533 1208 aa13.94□□□□□ -0.18
AC091078.3-201ENST00000556708 DCCP43146 1447 aa13.94□□□□□ -0.18
AC091078.3-201ENST00000556708 RTL1A6NKG5 1358 aa13.93□□□□□ -0.18
AC091078.3-201ENST00000556708 MSH6P52701 1360 aa13.93□□□□□ -0.18
AC091078.3-201ENST00000556708 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
AC091078.3-201ENST00000556708 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
AC091078.3-201ENST00000556708 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
AC091078.3-201ENST00000556708 DZIP1LQ8IYY4 767 aaKnown RBP13.93□□□□□ -0.18
AC091078.3-201ENST00000556708 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
AC091078.3-201ENST00000556708 BRINP3Q76B58 766 aa13.92□□□□□ -0.18
AC091078.3-201ENST00000556708 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
AC091078.3-201ENST00000556708 IL17REQ8NFR9 667 aa13.92□□□□□ -0.18
AC091078.3-201ENST00000556708 ALDH1L2Q3SY69 923 aa13.91□□□□□ -0.18
AC091078.3-201ENST00000556708 PHRF1Q9P1Y6 1649 aaKnown RBP13.91□□□□□ -0.18
AC091078.3-201ENST00000556708 MVPQ14764 893 aaKnown RBP13.9□□□□□ -0.18
AC091078.3-201ENST00000556708 TMEM57Q8N5G2 664 aa13.9□□□□□ -0.18
AC091078.3-201ENST00000556708 ANKRD24Q8TF21 1146 aa13.9□□□□□ -0.18
AC091078.3-201ENST00000556708 GAS2L2Q8NHY3 880 aa13.9□□□□□ -0.18
AC091078.3-201ENST00000556708 PXDNQ92626 1479 aa13.9□□□□□ -0.18
AC091078.3-201ENST00000556708 NBR1Q14596 966 aa13.89□□□□□ -0.19
AC091078.3-201ENST00000556708 FTSJ3Q8IY81 847 aaKnown RBP13.89□□□□□ -0.19
AC091078.3-201ENST00000556708 RTF1Q92541 710 aaKnown RBP13.89□□□□□ -0.19
AC091078.3-201ENST00000556708 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
AC091078.3-201ENST00000556708 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
AC091078.3-201ENST00000556708 CHRNA2Q15822 529 aa13.88□□□□□ -0.19
AC091078.3-201ENST00000556708 CENPQQ7L2Z9 268 aaPredicted RBP13.88□□□□□ -0.19
AC091078.3-201ENST00000556708 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
AC091078.3-201ENST00000556708 SLAIN2Q9P270 581 aa13.88□□□□□ -0.19
AC091078.3-201ENST00000556708 BRPF1P55201 1214 aaPredicted RBP13.88□□□□□ -0.19
AC091078.3-201ENST00000556708 NOP58Q9Y2X3 529 aaKnown RBP13.88□□□□□ -0.19
AC091078.3-201ENST00000556708 SPATA31A3Q5VYP0 1347 aa13.88□□□□□ -0.19
AC091078.3-201ENST00000556708 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
AC091078.3-201ENST00000556708 TSPYL4Q9UJ04 414 aa13.87□□□□□ -0.19
AC091078.3-201ENST00000556708 COL18A1P39060 1754 aa13.86□□□□□ -0.19
AC091078.3-201ENST00000556708 TNS3Q68CZ2 1445 aa13.86□□□□□ -0.19
AC091078.3-201ENST00000556708 MAP3K5Q99683 1374 aa13.85□□□□□ -0.19
AC091078.3-201ENST00000556708 KIF16BQ96L93 1317 aa13.85□□□□□ -0.19
AC091078.3-201ENST00000556708 CRYBG1Q9Y4K1 1723 aa13.85□□□□□ -0.19
AC091078.3-201ENST00000556708 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
AC091078.3-201ENST00000556708 LRRC37A3O60309 1634 aa13.85□□□□□ -0.19
AC091078.3-201ENST00000556708 ERBB3P21860 1342 aa13.84□□□□□ -0.19
AC091078.3-201ENST00000556708 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
AC091078.3-201ENST00000556708 NCAPD2Q15021 1401 aa13.83□□□□□ -0.19
AC091078.3-201ENST00000556708 IPO8O15397 1037 aaKnown RBP13.83□□□□□ -0.2
AC091078.3-201ENST00000556708 RGS3P49796 1198 aa13.83□□□□□ -0.2
AC091078.3-201ENST00000556708 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
AC091078.3-201ENST00000556708 KCNQ3O43525 872 aa13.83□□□□□ -0.2
AC091078.3-201ENST00000556708 G2E3Q7L622 706 aa13.83□□□□□ -0.2
AC091078.3-201ENST00000556708 ZBTB40Q9NUA8 1239 aa13.83□□□□□ -0.2
AC091078.3-201ENST00000556708 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
AC091078.3-201ENST00000556708 KIAA0232Q92628 1395 aa13.82□□□□□ -0.2
AC091078.3-201ENST00000556708 NECTIN2Q92692 538 aa13.82□□□□□ -0.2
AC091078.3-201ENST00000556708 SOS2Q07890 1332 aaPredicted RBP13.82□□□□□ -0.2
AC091078.3-201ENST00000556708 TAF7Q15545 349 aaPredicted RBP13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 UBE2Q2Q8WVN8 375 aa13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 CAMTA1Q9Y6Y1 1673 aa13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 ZBTB7BO15156 539 aaPredicted RBP13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 MS4A1P11836 297 aa13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 ARHGAP45Q92619 1136 aa13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 CEMIPQ8WUJ3 1361 aa13.81□□□□□ -0.2
AC091078.3-201ENST00000556708 PDE4AP27815 886 aa13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 IL27Q8NEV9 243 aa13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 C1orf115Q9H7X2 142 aa13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 NLRP2Q9NX02 1062 aa13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 ABCC4O15439 1325 aa13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 RGS12O14924 1447 aa13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 PLEKHO1Q53GL0 409 aaPredicted RBP13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 LMO7Q8WWI1 1683 aa13.8□□□□□ -0.2
AC091078.3-201ENST00000556708 FAM208AQ9UK61 1670 aaKnown RBP13.79□□□□□ -0.2
AC091078.3-201ENST00000556708 AKAP4Q5JQC9 854 aa13.79□□□□□ -0.2
AC091078.3-201ENST00000556708 RNMTO43148 476 aaKnown RBP13.78□□□□□ -0.2
AC091078.3-201ENST00000556708 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
AC091078.3-201ENST00000556708 PDZRN3Q9UPQ7 1066 aa13.78□□□□□ -0.2
AC091078.3-201ENST00000556708 F6X3S4 739 aa13.77□□□□□ -0.21
AC091078.3-201ENST00000556708 CSB-PGBD3P0DP91 1061 aa13.77□□□□□ -0.21
AC091078.3-201ENST00000556708 AAMPQ13685 434 aa13.77□□□□□ -0.21
AC091078.3-201ENST00000556708 MEGF6O75095 1541 aa13.77□□□□□ -0.21
AC091078.3-201ENST00000556708 AMOTQ4VCS5 1084 aa13.76□□□□□ -0.21
AC091078.3-201ENST00000556708 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
AC091078.3-201ENST00000556708 EIF4A1P60842 406 aaKnown RBP13.75□□□□□ -0.21
AC091078.3-201ENST00000556708 SIRT2Q8IXJ6 389 aa13.75□□□□□ -0.21
AC091078.3-201ENST00000556708 API5Q9BZZ5 524 aaKnown RBP13.75□□□□□ -0.21
AC091078.3-201ENST00000556708 CPDO75976 1380 aa13.75□□□□□ -0.21
AC091078.3-201ENST00000556708 KDM3BQ7LBC6 1761 aa13.74□□□□□ -0.21
AC091078.3-201ENST00000556708 PRAMEF22A3QJZ6 481 aa13.74□□□□□ -0.21
AC091078.3-201ENST00000556708 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
AC091078.3-201ENST00000556708 C1orf141Q5JVX7 400 aa13.74□□□□□ -0.21
AC091078.3-201ENST00000556708 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
AC091078.3-201ENST00000556708 NHSL1Q5SYE7 1610 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms