RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
XRCC3-216ENST00000556682 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
XRCC3-216ENST00000556682 SBF2Q86WG5 1849 aa14.77□□□□□ -0.05
XRCC3-216ENST00000556682 PCDH11XQ9BZA7 1347 aa14.76□□□□□ -0.05
XRCC3-216ENST00000556682 PCDH11YQ9BZA8 1340 aa14.76□□□□□ -0.05
XRCC3-216ENST00000556682 MORC1Q86VD1 984 aa14.76□□□□□ -0.05
XRCC3-216ENST00000556682 RREB1Q92766 1687 aa14.76□□□□□ -0.05
XRCC3-216ENST00000556682 MEGF6O75095 1541 aa14.76□□□□□ -0.05
XRCC3-216ENST00000556682 KIF7Q2M1P5 1343 aa14.75□□□□□ -0.05
XRCC3-216ENST00000556682 PRIM1P49642 420 aaKnown RBP14.75□□□□□ -0.05
XRCC3-216ENST00000556682 SPON1Q9HCB6 807 aa14.75□□□□□ -0.05
XRCC3-216ENST00000556682 RGPD3A6NKT7 1758 aaPredicted RBP14.75□□□□□ -0.05
XRCC3-216ENST00000556682 RGPD4Q7Z3J3 1758 aa14.75□□□□□ -0.05
XRCC3-216ENST00000556682 SLC15A2Q16348 729 aa14.74□□□□□ -0.05
XRCC3-216ENST00000556682 SPG7Q9UQ90 795 aa14.74□□□□□ -0.05
XRCC3-216ENST00000556682 LRP5O75197 1615 aa14.74□□□□□ -0.05
XRCC3-216ENST00000556682 NUP188Q5SRE5 1749 aa14.73□□□□□ -0.05
XRCC3-216ENST00000556682 SRCAPQ6ZRS2 3230 aa14.73□□□□□ -0.05
XRCC3-216ENST00000556682 HMGB2P26583 209 aaKnown RBP14.73□□□□□ -0.05
XRCC3-216ENST00000556682 SLC27A3Q5K4L6 730 aa14.73□□□□□ -0.05
XRCC3-216ENST00000556682 EYA1Q99502 592 aa14.73□□□□□ -0.05
XRCC3-216ENST00000556682 ANO8Q9HCE9 1232 aaPredicted RBP14.73□□□□□ -0.05
XRCC3-216ENST00000556682 NHSQ6T4R5 1651 aa14.72□□□□□ -0.05
XRCC3-216ENST00000556682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.72□□□□□ -0.05
XRCC3-216ENST00000556682 PPP1R1BQ9UD71 204 aaPredicted RBP14.72□□□□□ -0.05
XRCC3-216ENST00000556682 EIF4A2Q14240 407 aaKnown RBP14.71□□□□□ -0.05
XRCC3-216ENST00000556682 CYP27B1O15528 508 aa14.69□□□□□ -0.06
XRCC3-216ENST00000556682 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
XRCC3-216ENST00000556682 RGPD2P0DJD1 1756 aa14.69□□□□□ -0.06
XRCC3-216ENST00000556682 KAT6BQ8WYB5 2073 aa14.69□□□□□ -0.06
XRCC3-216ENST00000556682 LRRC4BQ9NT99 713 aa14.68□□□□□ -0.06
XRCC3-216ENST00000556682 NCAPD2Q15021 1401 aa14.67□□□□□ -0.06
XRCC3-216ENST00000556682 NKX1-1Q15270 411 aaPredicted RBP14.67□□□□□ -0.06
XRCC3-216ENST00000556682 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
XRCC3-216ENST00000556682 IFNL2Q8IZJ0 200 aa14.67□□□□□ -0.06
XRCC3-216ENST00000556682 CCNL1Q9UK58 526 aaPredicted RBP14.67□□□□□ -0.06
XRCC3-216ENST00000556682 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
XRCC3-216ENST00000556682 MAP2P11137 1827 aaKnown RBP14.66□□□□□ -0.06
XRCC3-216ENST00000556682 PER1O15534 1290 aaPredicted RBP14.66□□□□□ -0.06
XRCC3-216ENST00000556682 ZBTB7AO95365 584 aa14.66□□□□□ -0.06
XRCC3-216ENST00000556682 PLEKHO1Q53GL0 409 aaPredicted RBP14.66□□□□□ -0.06
XRCC3-216ENST00000556682 SMARCC1Q92922 1105 aaPredicted RBP14.66□□□□□ -0.06
XRCC3-216ENST00000556682 MTFR1LQ9H019 292 aa14.66□□□□□ -0.06
XRCC3-216ENST00000556682 IGSF1Q8N6C5 1336 aa14.66□□□□□ -0.06
XRCC3-216ENST00000556682 BTAF1O14981 1849 aa14.65□□□□□ -0.06
XRCC3-216ENST00000556682 AMOTQ4VCS5 1084 aa14.65□□□□□ -0.06
XRCC3-216ENST00000556682 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
XRCC3-216ENST00000556682 ANKRD26Q9UPS8 1709 aa14.65□□□□□ -0.06
XRCC3-216ENST00000556682 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
XRCC3-216ENST00000556682 HSP90AB1P08238 724 aaKnown RBP14.64□□□□□ -0.07
XRCC3-216ENST00000556682 PHKG2P15735 406 aa14.64□□□□□ -0.07
XRCC3-216ENST00000556682 ZNF827Q17R98 1081 aa14.64□□□□□ -0.07
XRCC3-216ENST00000556682 CC2D1BQ5T0F9 858 aaKnown RBP14.64□□□□□ -0.07
XRCC3-216ENST00000556682 AKT1S1Q96B36 256 aa14.64□□□□□ -0.07
XRCC3-216ENST00000556682 PDGFDQ9GZP0 370 aaPredicted RBP14.64□□□□□ -0.07
XRCC3-216ENST00000556682 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
XRCC3-216ENST00000556682 KCNA4P22459 653 aa14.63□□□□□ -0.07
XRCC3-216ENST00000556682 MTHFSP49914 203 aa14.63□□□□□ -0.07
XRCC3-216ENST00000556682 SLC16A10Q8TF71 515 aa14.63□□□□□ -0.07
XRCC3-216ENST00000556682 TMOD3Q9NYL9 352 aa14.63□□□□□ -0.07
XRCC3-216ENST00000556682 KCNQ4P56696 695 aa14.62□□□□□ -0.07
XRCC3-216ENST00000556682 PALLDQ8WX93 1383 aa14.61□□□□□ -0.07
XRCC3-216ENST00000556682 NPC1L1Q9UHC9 1359 aa14.61□□□□□ -0.07
XRCC3-216ENST00000556682 SHANK3Q9BYB0 1731 aa14.61□□□□□ -0.07
XRCC3-216ENST00000556682 IL13P35225 146 aa14.61□□□□□ -0.07
XRCC3-216ENST00000556682 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
XRCC3-216ENST00000556682 SULT6B1Q6IMI4 303 aa14.61□□□□□ -0.07
XRCC3-216ENST00000556682 PIGBQ92521 554 aa14.61□□□□□ -0.07
XRCC3-216ENST00000556682 DOT1LQ8TEK3 1739 aa14.61□□□□□ -0.07
XRCC3-216ENST00000556682 PTGER2P43116 358 aa14.6□□□□□ -0.07
XRCC3-216ENST00000556682 C1orf141Q5JVX7 400 aa14.6□□□□□ -0.07
XRCC3-216ENST00000556682 ZNF530Q6P9A1 599 aaPredicted RBP14.6□□□□□ -0.07
XRCC3-216ENST00000556682 DCAF5Q96JK2 942 aa14.6□□□□□ -0.07
XRCC3-216ENST00000556682 ERVV-2B6SEH9 535 aa14.59□□□□□ -0.07
XRCC3-216ENST00000556682 DIAPH1O60610 1272 aaKnown RBP14.59□□□□□ -0.07
XRCC3-216ENST00000556682 POLD1P28340 1107 aa14.59□□□□□ -0.07
XRCC3-216ENST00000556682 PKD1L3Q7Z443 1732 aa14.58□□□□□ -0.07
XRCC3-216ENST00000556682 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
XRCC3-216ENST00000556682 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
XRCC3-216ENST00000556682 FLAD1Q8NFF5 587 aa14.58□□□□□ -0.08
XRCC3-216ENST00000556682 PNPLA7Q6ZV29 1317 aa14.58□□□□□ -0.08
XRCC3-216ENST00000556682 PAPPAQ13219 1627 aa14.58□□□□□ -0.08
XRCC3-216ENST00000556682 CASZ1Q86V15 1759 aa14.57□□□□□ -0.08
XRCC3-216ENST00000556682 ARXQ96QS3 562 aa14.57□□□□□ -0.08
XRCC3-216ENST00000556682 LOC102724428A0A0B4J2F2 783 aa14.56□□□□□ -0.08
XRCC3-216ENST00000556682 SIK1P57059 783 aa14.56□□□□□ -0.08
XRCC3-216ENST00000556682 CABP4P57796 275 aa14.56□□□□□ -0.08
XRCC3-216ENST00000556682 AK7Q96M32 723 aa14.56□□□□□ -0.08
XRCC3-216ENST00000556682 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
XRCC3-216ENST00000556682 KDRP35968 1356 aa14.56□□□□□ -0.08
XRCC3-216ENST00000556682 FHDC1Q9C0D6 1143 aaPredicted RBP14.55□□□□□ -0.08
XRCC3-216ENST00000556682 ASAP1Q9ULH1 1129 aa14.55□□□□□ -0.08
XRCC3-216ENST00000556682 LY75O60449 1722 aa14.55□□□□□ -0.08
XRCC3-216ENST00000556682 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
XRCC3-216ENST00000556682 CFAP53Q96M91 514 aa14.54□□□□□ -0.08
XRCC3-216ENST00000556682 ATG3Q9NT62 314 aa14.54□□□□□ -0.08
XRCC3-216ENST00000556682 HMOX1P09601 288 aa14.53□□□□□ -0.08
XRCC3-216ENST00000556682 AKAP4Q5JQC9 854 aa14.53□□□□□ -0.08
XRCC3-216ENST00000556682 COL23A1Q86Y22 540 aaPredicted RBP14.53□□□□□ -0.08
XRCC3-216ENST00000556682 SYT17Q9BSW7 474 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms