RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 PTF1AQ7RTS3 328 aa23.05■■□□□ 1.28
PSEN1-217ENST00000556533 BCL11BQ9C0K0 894 aaPredicted RBP23.04■■□□□ 1.28
PSEN1-217ENST00000556533 IGSF1Q8N6C5 1336 aa23.04■■□□□ 1.28
PSEN1-217ENST00000556533 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
PSEN1-217ENST00000556533 KCNQ2O43526 872 aa23.03■■□□□ 1.28
PSEN1-217ENST00000556533 SULT6B1Q6IMI4 303 aa23.03■■□□□ 1.28
PSEN1-217ENST00000556533 AEBP1Q8IUX7 1158 aa23.03■■□□□ 1.28
PSEN1-217ENST00000556533 SPG7Q9UQ90 795 aa23.03■■□□□ 1.28
PSEN1-217ENST00000556533 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
PSEN1-217ENST00000556533 U2SURPO15042 1029 aaKnown RBP23■■□□□ 1.27
PSEN1-217ENST00000556533 EZH2Q15910 746 aaKnown RBP23■■□□□ 1.27
PSEN1-217ENST00000556533 SYTL4Q96C24 671 aaPredicted RBP23■■□□□ 1.27
PSEN1-217ENST00000556533 PCDH11XQ9BZA7 1347 aa23■■□□□ 1.27
PSEN1-217ENST00000556533 PCDH11YQ9BZA8 1340 aa23■■□□□ 1.27
PSEN1-217ENST00000556533 BCL9O00512 1426 aa22.99■■□□□ 1.27
PSEN1-217ENST00000556533 NCAPD2Q15021 1401 aa22.99■■□□□ 1.27
PSEN1-217ENST00000556533 HMOX1P09601 288 aa22.99■■□□□ 1.27
PSEN1-217ENST00000556533 CYP27B1O15528 508 aa22.98■■□□□ 1.27
PSEN1-217ENST00000556533 PRIM1P49642 420 aaKnown RBP22.97■■□□□ 1.27
PSEN1-217ENST00000556533 PLEKHO1Q53GL0 409 aaPredicted RBP22.97■■□□□ 1.27
PSEN1-217ENST00000556533 CAMKK2Q96RR4 588 aa22.97■■□□□ 1.27
PSEN1-217ENST00000556533 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
PSEN1-217ENST00000556533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.276e-6■□□□□ 8.9
PSEN1-217ENST00000556533 PARD3Q8TEW0 1356 aa22.94■■□□□ 1.26
PSEN1-217ENST00000556533 RALBP1Q15311 655 aa22.94■■□□□ 1.26
PSEN1-217ENST00000556533 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
PSEN1-217ENST00000556533 NUDCQ9Y266 331 aa22.93■■□□□ 1.26
PSEN1-217ENST00000556533 AMOTQ4VCS5 1084 aa22.92■■□□□ 1.26
PSEN1-217ENST00000556533 ZNF530Q6P9A1 599 aaPredicted RBP22.92■■□□□ 1.26
PSEN1-217ENST00000556533 TNS1Q9HBL0 1735 aaKnown RBP22.91■■□□□ 1.26
PSEN1-217ENST00000556533 PLSCR1O15162 318 aa22.91■■□□□ 1.26
PSEN1-217ENST00000556533 PHKG2P15735 406 aa22.91■■□□□ 1.26
PSEN1-217ENST00000556533 COL3A1P02461 1466 aaPredicted RBP22.9■■□□□ 1.26
PSEN1-217ENST00000556533 KDRP35968 1356 aa22.89■■□□□ 1.26
PSEN1-217ENST00000556533 U2AF1L5P0DN76 240 aaPredicted RBP22.89■■□□□ 1.25
PSEN1-217ENST00000556533 U2AF1Q01081 240 aaKnown RBP eCLIP22.89■■□□□ 1.25
PSEN1-217ENST00000556533 MPRIPQ6WCQ1 1025 aa22.89■■□□□ 1.25
PSEN1-217ENST00000556533 NKX1-1Q15270 411 aaPredicted RBP22.88■■□□□ 1.25
PSEN1-217ENST00000556533 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
PSEN1-217ENST00000556533 TXNRD1Q16881 649 aa22.86■■□□□ 1.25
PSEN1-217ENST00000556533 PROM2Q8N271 834 aa22.86■■□□□ 1.25
PSEN1-217ENST00000556533 SBF2Q86WG5 1849 aa22.86■■□□□ 1.25
PSEN1-217ENST00000556533 SHANK3Q9BYB0 1731 aa22.85■■□□□ 1.25
PSEN1-217ENST00000556533 PSDA5PKW4 1024 aaPredicted RBP22.84■■□□□ 1.25
PSEN1-217ENST00000556533 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
PSEN1-217ENST00000556533 NBPF14Q5TI25 921 aa22.84■■□□□ 1.25
PSEN1-217ENST00000556533 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
PSEN1-217ENST00000556533 MYBBP1AQ9BQG0 1328 aaKnown RBP22.83■■□□□ 1.25
PSEN1-217ENST00000556533 MTHFSDQ2M296 383 aaKnown RBP22.83■■□□□ 1.25
PSEN1-217ENST00000556533 PLEKHG2Q9H7P9 1386 aa22.83■■□□□ 1.25
PSEN1-217ENST00000556533 PKD1L3Q7Z443 1732 aa22.82■■□□□ 1.24
PSEN1-217ENST00000556533 PRKAR2BP31323 418 aa22.82■■□□□ 1.24
PSEN1-217ENST00000556533 R3HDM1Q15032 1099 aaKnown RBP22.82■■□□□ 1.24
PSEN1-217ENST00000556533 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
PSEN1-217ENST00000556533 PRKRIP1Q9H875 184 aaPredicted RBP22.82■■□□□ 1.24
PSEN1-217ENST00000556533 TMOD3Q9NYL9 352 aa22.82■■□□□ 1.24
PSEN1-217ENST00000556533 PIGBQ92521 554 aa22.81■■□□□ 1.24
PSEN1-217ENST00000556533 KCNQ4P56696 695 aa22.8■■□□□ 1.24
PSEN1-217ENST00000556533 AKAP4Q5JQC9 854 aa22.8■■□□□ 1.24
PSEN1-217ENST00000556533 RSPH6AQ9H0K4 717 aa22.8■■□□□ 1.24
PSEN1-217ENST00000556533 KAT6BQ8WYB5 2073 aa22.79■■□□□ 1.24
PSEN1-217ENST00000556533 CABP4P57796 275 aa22.79■■□□□ 1.24
PSEN1-217ENST00000556533 PHACTR3Q96KR7 559 aa22.79■■□□□ 1.24
PSEN1-217ENST00000556533 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
PSEN1-217ENST00000556533 ERVV-2B6SEH9 535 aa22.78■■□□□ 1.24
PSEN1-217ENST00000556533 FCHSD2O94868 740 aa22.78■■□□□ 1.24
PSEN1-217ENST00000556533 LGR6Q9HBX8 967 aa22.76■■□□□ 1.23
PSEN1-217ENST00000556533 LRRC4BQ9NT99 713 aa22.76■■□□□ 1.23
PSEN1-217ENST00000556533 BTAF1O14981 1849 aa22.75■■□□□ 1.23
PSEN1-217ENST00000556533 GAS2L2Q8NHY3 880 aa22.75■■□□□ 1.23
PSEN1-217ENST00000556533 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
PSEN1-217ENST00000556533 STK32BQ9NY57 414 aa22.75■■□□□ 1.23
PSEN1-217ENST00000556533 CCNL1Q9UK58 526 aaPredicted RBP22.75■■□□□ 1.23
PSEN1-217ENST00000556533 ASAP1Q9ULH1 1129 aa22.75■■□□□ 1.23
PSEN1-217ENST00000556533 KDM6AO15550 1401 aaPredicted RBP22.74■■□□□ 1.23
PSEN1-217ENST00000556533 SLC27A3Q5K4L6 730 aa22.74■■□□□ 1.23
PSEN1-217ENST00000556533 NFATC2IPQ8NCF5 419 aa22.74■■□□□ 1.23
PSEN1-217ENST00000556533 NEFMP07197 916 aa22.73■■□□□ 1.23
PSEN1-217ENST00000556533 ANO8Q9HCE9 1232 aaPredicted RBP22.73■■□□□ 1.23
PSEN1-217ENST00000556533 PALLDQ8WX93 1383 aa22.73■■□□□ 1.23
PSEN1-217ENST00000556533 RNMTO43148 476 aaKnown RBP22.72■■□□□ 1.23
PSEN1-217ENST00000556533 ANP32CO43423 234 aa22.72■■□□□ 1.23
PSEN1-217ENST00000556533 ATG3Q9NT62 314 aa22.72■■□□□ 1.23
PSEN1-217ENST00000556533 GNAT3A8MTJ3 354 aa22.71■■□□□ 1.23
PSEN1-217ENST00000556533 TOGARAM1Q9Y4F4 1720 aa22.71■■□□□ 1.23
PSEN1-217ENST00000556533 WDR43Q15061 677 aaKnown RBP eCLIP22.7■■□□□ 1.22
PSEN1-217ENST00000556533 RREB1Q92766 1687 aa22.7■■□□□ 1.22
PSEN1-217ENST00000556533 NUP188Q5SRE5 1749 aa22.69■■□□□ 1.22
PSEN1-217ENST00000556533 SLC15A2Q16348 729 aa22.69■■□□□ 1.22
PSEN1-217ENST00000556533 PNNQ9H307 717 aaKnown RBP22.69■■□□□ 1.22
PSEN1-217ENST00000556533 MAP3K5Q99683 1374 aa22.68■■□□□ 1.22
PSEN1-217ENST00000556533 RBM42Q9BTD8 480 aaKnown RBP22.68■■□□□ 1.22
PSEN1-217ENST00000556533 RGPD3A6NKT7 1758 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-217ENST00000556533 RGPD4Q7Z3J3 1758 aa22.68■■□□□ 1.22
PSEN1-217ENST00000556533 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
PSEN1-217ENST00000556533 MAPK8IP3Q9UPT6 1336 aa22.66■■□□□ 1.22
PSEN1-217ENST00000556533 LOC102724428A0A0B4J2F2 783 aa22.66■■□□□ 1.22
PSEN1-217ENST00000556533 SIK1P57059 783 aa22.66■■□□□ 1.22
PSEN1-217ENST00000556533 ZNF827Q17R98 1081 aa22.66■■□□□ 1.22
PSEN1-217ENST00000556533 IL17REQ8NFR9 667 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms