RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 NSD2O96028 1365 aa11.13□□□□□ -0.63
VTI1B-206ENST00000556461 PLSCR1O15162 318 aa11.12□□□□□ -0.63
VTI1B-206ENST00000556461 EIF4A2Q14240 407 aaKnown RBP11.12□□□□□ -0.63
VTI1B-206ENST00000556461 EYA1Q99502 592 aa11.12□□□□□ -0.63
VTI1B-206ENST00000556461 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
VTI1B-206ENST00000556461 SHANK3Q9BYB0 1731 aa11.12□□□□□ -0.63
VTI1B-206ENST00000556461 MAP2P11137 1827 aaKnown RBP11.12□□□□□ -0.63
VTI1B-206ENST00000556461 NCAPD2Q15021 1401 aa11.11□□□□□ -0.63
VTI1B-206ENST00000556461 RAPGEF4Q8WZA2 1011 aa11.11□□□□□ -0.63
VTI1B-206ENST00000556461 ANO8Q9HCE9 1232 aaPredicted RBP11.11□□□□□ -0.63
VTI1B-206ENST00000556461 NHSQ6T4R5 1651 aa11.11□□□□□ -0.63
VTI1B-206ENST00000556461 TATP17735 454 aaPredicted RBP11.1□□□□□ -0.63
VTI1B-206ENST00000556461 TXNRD1Q16881 649 aa11.1□□□□□ -0.63
VTI1B-206ENST00000556461 CYP27B1O15528 508 aa11.09□□□□□ -0.63
VTI1B-206ENST00000556461 PRIM1P49642 420 aaKnown RBP11.09□□□□□ -0.63
VTI1B-206ENST00000556461 CNGB1Q14028 1251 aaPredicted RBP11.09□□□□□ -0.63
VTI1B-206ENST00000556461 CC2D1BQ5T0F9 858 aaKnown RBP11.09□□□□□ -0.63
VTI1B-206ENST00000556461 NBPF14Q5TI25 921 aa11.07□□□□□ -0.64
VTI1B-206ENST00000556461 SYTL4Q96C24 671 aaPredicted RBP11.07□□□□□ -0.64
VTI1B-206ENST00000556461 PDGFDQ9GZP0 370 aaPredicted RBP11.07□□□□□ -0.64
VTI1B-206ENST00000556461 RGPD3A6NKT7 1758 aaPredicted RBP11.07□□□□□ -0.64
VTI1B-206ENST00000556461 RGPD4Q7Z3J3 1758 aa11.07□□□□□ -0.64
VTI1B-206ENST00000556461 BTAF1O14981 1849 aa11.07□□□□□ -0.64
VTI1B-206ENST00000556461 IGSF1Q8N6C5 1336 aa11.07□□□□□ -0.64
VTI1B-206ENST00000556461 KAT6BQ8WYB5 2073 aa11.06□□□□□ -0.64
VTI1B-206ENST00000556461 IL13P35225 146 aa11.06□□□□□ -0.64
VTI1B-206ENST00000556461 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
VTI1B-206ENST00000556461 LRRC4BQ9NT99 713 aa11.06□□□□□ -0.64
VTI1B-206ENST00000556461 DOT1LQ8TEK3 1739 aa11.06□□□□□ -0.64
VTI1B-206ENST00000556461 PCDH11XQ9BZA7 1347 aa11.06□□□□□ -0.64
VTI1B-206ENST00000556461 PCDH11YQ9BZA8 1340 aa11.06□□□□□ -0.64
VTI1B-206ENST00000556461 MTHFSP49914 203 aa11.05□□□□□ -0.64
VTI1B-206ENST00000556461 KCNQ4P56696 695 aa11.05□□□□□ -0.64
VTI1B-206ENST00000556461 PKD1L3Q7Z443 1732 aa11.04□□□□□ -0.64
VTI1B-206ENST00000556461 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
VTI1B-206ENST00000556461 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
VTI1B-206ENST00000556461 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
VTI1B-206ENST00000556461 SPG7Q9UQ90 795 aa11.03□□□□□ -0.64
VTI1B-206ENST00000556461 TOGARAM1Q9Y4F4 1720 aa11.03□□□□□ -0.64
VTI1B-206ENST00000556461 LRP5O75197 1615 aa11.02□□□□□ -0.64
VTI1B-206ENST00000556461 PAPPAQ13219 1627 aa11.02□□□□□ -0.64
VTI1B-206ENST00000556461 PHKG2P15735 406 aa11.02□□□□□ -0.65
VTI1B-206ENST00000556461 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
VTI1B-206ENST00000556461 SULT6B1Q6IMI4 303 aa11.02□□□□□ -0.65
VTI1B-206ENST00000556461 MPRIPQ6WCQ1 1025 aa11.02□□□□□ -0.65
VTI1B-206ENST00000556461 STK32BQ9NY57 414 aa11.02□□□□□ -0.65
VTI1B-206ENST00000556461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.02□□□□□ -0.654e-7■□□□□ 10.3
VTI1B-206ENST00000556461 PIGBQ92521 554 aa11.01□□□□□ -0.65
VTI1B-206ENST00000556461 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
VTI1B-206ENST00000556461 IFNL2Q8IZJ0 200 aa11□□□□□ -0.65
VTI1B-206ENST00000556461 AKT1S1Q96B36 256 aa11□□□□□ -0.65
VTI1B-206ENST00000556461 KDRP35968 1356 aa11□□□□□ -0.65
VTI1B-206ENST00000556461 CASZ1Q86V15 1759 aa10.99□□□□□ -0.65
VTI1B-206ENST00000556461 DIAPH1O60610 1272 aaKnown RBP10.99□□□□□ -0.65
VTI1B-206ENST00000556461 ZBTB7AO95365 584 aa10.99□□□□□ -0.65
VTI1B-206ENST00000556461 HMOX1P09601 288 aa10.99□□□□□ -0.65
VTI1B-206ENST00000556461 PLEKHO1Q53GL0 409 aaPredicted RBP10.99□□□□□ -0.65
VTI1B-206ENST00000556461 SLC27A3Q5K4L6 730 aa10.99□□□□□ -0.65
VTI1B-206ENST00000556461 ZNF530Q6P9A1 599 aaPredicted RBP10.99□□□□□ -0.65
VTI1B-206ENST00000556461 CCNL1Q9UK58 526 aaPredicted RBP10.99□□□□□ -0.65
VTI1B-206ENST00000556461 PALLDQ8WX93 1383 aa10.98□□□□□ -0.65
VTI1B-206ENST00000556461 KDM6AO15550 1401 aaPredicted RBP10.98□□□□□ -0.65
VTI1B-206ENST00000556461 LY75O60449 1722 aa10.98□□□□□ -0.65
VTI1B-206ENST00000556461 PPP2R1AP30153 589 aa10.97□□□□□ -0.65
VTI1B-206ENST00000556461 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
VTI1B-206ENST00000556461 SPON1Q9HCB6 807 aa10.97□□□□□ -0.65
VTI1B-206ENST00000556461 ASAP1Q9ULH1 1129 aa10.97□□□□□ -0.65
VTI1B-206ENST00000556461 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
VTI1B-206ENST00000556461 PLEKHG2Q9H7P9 1386 aa10.97□□□□□ -0.65
VTI1B-206ENST00000556461 ITGB4P16144 1822 aa10.97□□□□□ -0.65
VTI1B-206ENST00000556461 PNPLA7Q6ZV29 1317 aa10.96□□□□□ -0.65
VTI1B-206ENST00000556461 PTGER2P43116 358 aa10.96□□□□□ -0.65
VTI1B-206ENST00000556461 ATG3Q9NT62 314 aa10.96□□□□□ -0.65
VTI1B-206ENST00000556461 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.65
VTI1B-206ENST00000556461 SMIM5Q71RC9 77 aa10.95□□□□□ -0.66
VTI1B-206ENST00000556461 AMIGO3Q86WK7 504 aa10.95□□□□□ -0.66
VTI1B-206ENST00000556461 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
VTI1B-206ENST00000556461 ERVV-2B6SEH9 535 aa10.94□□□□□ -0.66
VTI1B-206ENST00000556461 U2SURPO15042 1029 aaKnown RBP10.94□□□□□ -0.66
VTI1B-206ENST00000556461 ITPK1Q13572 414 aa10.94□□□□□ -0.66
VTI1B-206ENST00000556461 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
VTI1B-206ENST00000556461 SMARCC1Q92922 1105 aaPredicted RBP10.94□□□□□ -0.66
VTI1B-206ENST00000556461 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
VTI1B-206ENST00000556461 SGIP1Q9BQI5 828 aa10.94□□□□□ -0.66
VTI1B-206ENST00000556461 TFCP2L1Q9NZI6 479 aa10.94□□□□□ -0.66
VTI1B-206ENST00000556461 LOC102724428A0A0B4J2F2 783 aa10.93□□□□□ -0.66
VTI1B-206ENST00000556461 HSP90AB1P08238 724 aaKnown RBP10.93□□□□□ -0.66
VTI1B-206ENST00000556461 SIK1P57059 783 aa10.93□□□□□ -0.66
VTI1B-206ENST00000556461 DDX10Q13206 875 aaKnown RBP10.93□□□□□ -0.66
VTI1B-206ENST00000556461 C1orf141Q5JVX7 400 aa10.93□□□□□ -0.66
VTI1B-206ENST00000556461 LINC00116Q8NCU8 138 aa10.93□□□□□ -0.66
VTI1B-206ENST00000556461 MTFR1LQ9H019 292 aa10.93□□□□□ -0.66
VTI1B-206ENST00000556461 LGR6Q9HBX8 967 aa10.93□□□□□ -0.66
VTI1B-206ENST00000556461 TUBGCP6Q96RT7 1819 aa10.93□□□□□ -0.66
VTI1B-206ENST00000556461 CABP4P57796 275 aa10.92□□□□□ -0.66
VTI1B-206ENST00000556461 AKAP4Q5JQC9 854 aa10.92□□□□□ -0.66
VTI1B-206ENST00000556461 COL23A1Q86Y22 540 aaPredicted RBP10.92□□□□□ -0.66
VTI1B-206ENST00000556461 NFATC2IPQ8NCF5 419 aa10.91□□□□□ -0.66
VTI1B-206ENST00000556461 PHACTR3Q96KR7 559 aa10.91□□□□□ -0.66
VTI1B-206ENST00000556461 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms