RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
APEX1-213ENST00000556296 TFCP2L1Q9NZI6 479 aa17.55■□□□□ 0.4
APEX1-213ENST00000556296 KIF20BQ96Q89 1820 aa17.55■□□□□ 0.4
APEX1-213ENST00000556296 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
APEX1-213ENST00000556296 FYB1O15117 783 aa17.54■□□□□ 0.4
APEX1-213ENST00000556296 FBLN1P23142 703 aa17.54■□□□□ 0.4
APEX1-213ENST00000556296 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
APEX1-213ENST00000556296 RTL1A6NKG5 1358 aa17.53■□□□□ 0.4
APEX1-213ENST00000556296 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
APEX1-213ENST00000556296 SGIP1Q9BQI5 828 aa17.53■□□□□ 0.4
APEX1-213ENST00000556296 LRRC4BQ9NT99 713 aa17.53■□□□□ 0.4
APEX1-213ENST00000556296 BTAF1O14981 1849 aa17.53■□□□□ 0.4
APEX1-213ENST00000556296 ZNF827Q17R98 1081 aa17.52■□□□□ 0.4
APEX1-213ENST00000556296 AKT1S1Q96B36 256 aa17.52■□□□□ 0.4
APEX1-213ENST00000556296 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
APEX1-213ENST00000556296 GGNBP2Q9H3C7 697 aa17.51■□□□□ 0.39
APEX1-213ENST00000556296 MAP3K5Q99683 1374 aa17.51■□□□□ 0.39
APEX1-213ENST00000556296 SHANK3Q9BYB0 1731 aa17.5■□□□□ 0.39
APEX1-213ENST00000556296 GPR162Q16538 588 aa17.5■□□□□ 0.39
APEX1-213ENST00000556296 CCNL1Q9UK58 526 aaPredicted RBP17.5■□□□□ 0.39
APEX1-213ENST00000556296 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
APEX1-213ENST00000556296 KLHL34Q8N239 644 aa17.49■□□□□ 0.39
APEX1-213ENST00000556296 NBPF6Q5VWK0 638 aa17.48■□□□□ 0.39
APEX1-213ENST00000556296 NBPF4Q96M43 638 aa17.48■□□□□ 0.39
APEX1-213ENST00000556296 POLR3GLQ9BT43 218 aa17.48■□□□□ 0.39
APEX1-213ENST00000556296 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
APEX1-213ENST00000556296 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
APEX1-213ENST00000556296 MSH5O43196 834 aa17.47■□□□□ 0.39
APEX1-213ENST00000556296 ZNF784Q8NCA9 323 aaPredicted RBP17.47■□□□□ 0.39
APEX1-213ENST00000556296 KIF24Q5T7B8 1368 aa17.47■□□□□ 0.39
APEX1-213ENST00000556296 PAPPAQ13219 1627 aa17.47■□□□□ 0.39
APEX1-213ENST00000556296 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
APEX1-213ENST00000556296 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
APEX1-213ENST00000556296 MEGF6O75095 1541 aa17.46■□□□□ 0.39
APEX1-213ENST00000556296 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
APEX1-213ENST00000556296 INSRP06213 1382 aa17.45■□□□□ 0.38
APEX1-213ENST00000556296 FLAD1Q8NFF5 587 aa17.45■□□□□ 0.38
APEX1-213ENST00000556296 NSD3Q9BZ95 1437 aa17.45■□□□□ 0.38
APEX1-213ENST00000556296 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
APEX1-213ENST00000556296 FLT4P35916 1363 aa17.44■□□□□ 0.38
APEX1-213ENST00000556296 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
APEX1-213ENST00000556296 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
APEX1-213ENST00000556296 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
APEX1-213ENST00000556296 DOT1LQ8TEK3 1739 aa17.44■□□□□ 0.38
APEX1-213ENST00000556296 ANKRD26Q9UPS8 1709 aa17.44■□□□□ 0.38
APEX1-213ENST00000556296 KCNQ4P56696 695 aa17.43■□□□□ 0.38
APEX1-213ENST00000556296 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
APEX1-213ENST00000556296 SMARCC1Q92922 1105 aaPredicted RBP17.43■□□□□ 0.38
APEX1-213ENST00000556296 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
APEX1-213ENST00000556296 GRIN3BO60391 1043 aa17.41■□□□□ 0.38
APEX1-213ENST00000556296 LY75O60449 1722 aa17.41■□□□□ 0.38
APEX1-213ENST00000556296 NSD2O96028 1365 aa17.4■□□□□ 0.38
APEX1-213ENST00000556296 PPM1GO15355 546 aaPredicted RBP17.4■□□□□ 0.38
APEX1-213ENST00000556296 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
APEX1-213ENST00000556296 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
APEX1-213ENST00000556296 QSER1Q2KHR3 1735 aa17.39■□□□□ 0.37
APEX1-213ENST00000556296 UTRNP46939 3433 aa17.38■□□□□ 0.37
APEX1-213ENST00000556296 COL23A1Q86Y22 540 aaPredicted RBP17.38■□□□□ 0.37
APEX1-213ENST00000556296 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
APEX1-213ENST00000556296 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
APEX1-213ENST00000556296 AK7Q96M32 723 aa17.37■□□□□ 0.37
APEX1-213ENST00000556296 PALLDQ8WX93 1383 aa17.37■□□□□ 0.37
APEX1-213ENST00000556296 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
APEX1-213ENST00000556296 TUBGCP6Q96RT7 1819 aa17.36■□□□□ 0.37
APEX1-213ENST00000556296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.373e-7■□□□□ 8.7
APEX1-213ENST00000556296 CYP27B1O15528 508 aa17.34■□□□□ 0.37
APEX1-213ENST00000556296 GIGYF1O75420 1035 aaPredicted RBP17.34■□□□□ 0.37
APEX1-213ENST00000556296 C1QTNF8P60827 252 aa17.34■□□□□ 0.37
APEX1-213ENST00000556296 CD2APQ9Y5K6 639 aa17.34■□□□□ 0.37
APEX1-213ENST00000556296 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.37
APEX1-213ENST00000556296 NKX1-1Q15270 411 aaPredicted RBP17.33■□□□□ 0.36
APEX1-213ENST00000556296 MSL1Q68DK7 614 aa17.33■□□□□ 0.36
APEX1-213ENST00000556296 NLGN2Q8NFZ4 835 aa17.33■□□□□ 0.36
APEX1-213ENST00000556296 PANK3Q9H999 370 aa17.33■□□□□ 0.36
APEX1-213ENST00000556296 ITGB4P16144 1822 aa17.33■□□□□ 0.36
APEX1-213ENST00000556296 SENP3-EIF4A1A0A087X0R7 540 aa17.32■□□□□ 0.36
APEX1-213ENST00000556296 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
APEX1-213ENST00000556296 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
APEX1-213ENST00000556296 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
APEX1-213ENST00000556296 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
APEX1-213ENST00000556296 PIGBQ92521 554 aa17.31■□□□□ 0.36
APEX1-213ENST00000556296 TAF1LQ8IZX4 1826 aa17.29■□□□□ 0.36
APEX1-213ENST00000556296 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
APEX1-213ENST00000556296 SSFA2P28290 1259 aa17.29■□□□□ 0.36
APEX1-213ENST00000556296 SIK1P57059 783 aa17.29■□□□□ 0.36
APEX1-213ENST00000556296 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
APEX1-213ENST00000556296 EYA1Q99502 592 aa17.29■□□□□ 0.36
APEX1-213ENST00000556296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
APEX1-213ENST00000556296 PHF14O94880 888 aa17.28■□□□□ 0.36
APEX1-213ENST00000556296 HSP90AB1P08238 724 aaKnown RBP17.28■□□□□ 0.36
APEX1-213ENST00000556296 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
APEX1-213ENST00000556296 C5P01031 1676 aa17.26■□□□□ 0.35
APEX1-213ENST00000556296 YBX3P16989 372 aaKnown RBP eCLIP17.26■□□□□ 0.35
APEX1-213ENST00000556296 ATP6V1AP38606 617 aa17.26■□□□□ 0.35
APEX1-213ENST00000556296 PLEKHG2Q9H7P9 1386 aa17.26■□□□□ 0.35
APEX1-213ENST00000556296 PHKG2P15735 406 aa17.25■□□□□ 0.35
APEX1-213ENST00000556296 TNNT2P45379 298 aaPredicted RBP17.25■□□□□ 0.35
APEX1-213ENST00000556296 GNPATO15228 680 aa17.24■□□□□ 0.35
APEX1-213ENST00000556296 EIF4A2Q14240 407 aaKnown RBP17.24■□□□□ 0.35
APEX1-213ENST00000556296 PLEKHO1Q53GL0 409 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms