RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 TAF1LQ8IZX4 1826 aa15.3■□□□□ 0.04
CHGA-205ENST00000556098 NLGN2Q8NFZ4 835 aa15.3■□□□□ 0.04
CHGA-205ENST00000556098 HSPA5P11021 654 aaKnown RBP15.29■□□□□ 0.04
CHGA-205ENST00000556098 MAP3K5Q99683 1374 aa15.28■□□□□ 0.04
CHGA-205ENST00000556098 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
CHGA-205ENST00000556098 MSL1Q68DK7 614 aa15.27■□□□□ 0.04
CHGA-205ENST00000556098 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.04
CHGA-205ENST00000556098 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
CHGA-205ENST00000556098 ITGB4P16144 1822 aa15.27■□□□□ 0.03
CHGA-205ENST00000556098 ZNF526Q8TF50 670 aaPredicted RBP15.25■□□□□ 0.03
CHGA-205ENST00000556098 SLC16A10Q8TF71 515 aa15.25■□□□□ 0.03
CHGA-205ENST00000556098 CARD11Q9BXL7 1154 aa15.25■□□□□ 0.03
CHGA-205ENST00000556098 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
CHGA-205ENST00000556098 PRIM1P49642 420 aaKnown RBP15.24■□□□□ 0.03
CHGA-205ENST00000556098 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
CHGA-205ENST00000556098 WWC3Q9ULE0 1092 aa15.24■□□□□ 0.03
CHGA-205ENST00000556098 USP31Q70CQ4 1352 aa15.24■□□□□ 0.03
CHGA-205ENST00000556098 CD163L1Q9NR16 1453 aa15.23■□□□□ 0.03
CHGA-205ENST00000556098 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
CHGA-205ENST00000556098 CCNL1Q9UK58 526 aaPredicted RBP15.23■□□□□ 0.03
CHGA-205ENST00000556098 YBX3P16989 372 aaKnown RBP eCLIP15.22■□□□□ 0.03
CHGA-205ENST00000556098 SBNO2Q9Y2G9 1366 aa15.22■□□□□ 0.03
CHGA-205ENST00000556098 KIF20BQ96Q89 1820 aa15.22■□□□□ 0.03
CHGA-205ENST00000556098 EDC4Q6P2E9 1401 aaKnown RBP15.21■□□□□ 0.03
CHGA-205ENST00000556098 ATP10DQ9P241 1426 aa15.21■□□□□ 0.03
CHGA-205ENST00000556098 SLC12A5Q9H2X9 1139 aa15.21■□□□□ 0.03
CHGA-205ENST00000556098 ANKRD36BQ8N2N9 1353 aa15.21■□□□□ 0.02
CHGA-205ENST00000556098 AMPHP49418 695 aa15.2■□□□□ 0.02
CHGA-205ENST00000556098 A0A1W2PP64 1363 aa15.2■□□□□ 0.02
CHGA-205ENST00000556098 GRIN3BO60391 1043 aa15.19■□□□□ 0.02
CHGA-205ENST00000556098 WASHC2AQ641Q2 1341 aa15.18■□□□□ 0.02
CHGA-205ENST00000556098 UBR3Q6ZT12 1888 aa15.18■□□□□ 0.02
CHGA-205ENST00000556098 MEGF6O75095 1541 aa15.18■□□□□ 0.02
CHGA-205ENST00000556098 FBLN1P23142 703 aa15.18■□□□□ 0.02
CHGA-205ENST00000556098 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
CHGA-205ENST00000556098 USHBP1Q8N6Y0 703 aa15.18■□□□□ 0.02
CHGA-205ENST00000556098 IP6K1Q92551 441 aa15.18■□□□□ 0.02
CHGA-205ENST00000556098 GPBP1L1Q9HC44 474 aaPredicted RBP15.18■□□□□ 0.02
CHGA-205ENST00000556098 TERF2IPQ9NYB0 399 aa15.18■□□□□ 0.02
CHGA-205ENST00000556098 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
CHGA-205ENST00000556098 TOGARAM1Q9Y4F4 1720 aa15.17■□□□□ 0.02
CHGA-205ENST00000556098 NSD2O96028 1365 aa15.17■□□□□ 0.02
CHGA-205ENST00000556098 ZCRB1Q8TBF4 217 aaKnown RBP15.17■□□□□ 0.02
CHGA-205ENST00000556098 GOLGB1Q14789 3259 aaKnown RBP15.16■□□□□ 0.02
CHGA-205ENST00000556098 N4BP2Q86UW6 1770 aaPredicted RBP15.16■□□□□ 0.02
CHGA-205ENST00000556098 DDX10Q13206 875 aaKnown RBP15.16■□□□□ 0.02
CHGA-205ENST00000556098 MIER1Q8N108 512 aa15.16■□□□□ 0.02
CHGA-205ENST00000556098 COG3Q96JB2 828 aa15.16■□□□□ 0.02
CHGA-205ENST00000556098 HOXC9P31274 260 aa15.15■□□□□ 0.02
CHGA-205ENST00000556098 MAP3K19Q56UN5 1328 aa15.15■□□□□ 0.02
CHGA-205ENST00000556098 ANP32CO43423 234 aa15.14■□□□□ 0.01
CHGA-205ENST00000556098 PHF14O94880 888 aa15.14■□□□□ 0.01
CHGA-205ENST00000556098 KIF7Q2M1P5 1343 aa15.14■□□□□ 0.01
CHGA-205ENST00000556098 CCER2I3L3R5 266 aa15.13■□□□□ 0.01
CHGA-205ENST00000556098 SMG6Q86US8 1419 aaKnown RBP15.13■□□□□ 0.01
CHGA-205ENST00000556098 RRS1Q15050 365 aaKnown RBP15.12■□□□□ 0.01
CHGA-205ENST00000556098 RAPGEF4Q8WZA2 1011 aa15.12■□□□□ 0.01
CHGA-205ENST00000556098 CDCA8Q53HL2 280 aa15.11■□□□□ 0.01
CHGA-205ENST00000556098 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
CHGA-205ENST00000556098 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
CHGA-205ENST00000556098 AK7Q96M32 723 aa15.11■□□□□ 0.01
CHGA-205ENST00000556098 ST20-MTHFSA0A0A6YYL1 179 aa15.1■□□□□ 0.01
CHGA-205ENST00000556098 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
CHGA-205ENST00000556098 MAP2P11137 1827 aaKnown RBP15.1■□□□□ 0.01
CHGA-205ENST00000556098 PALLDQ8WX93 1383 aa15.1■□□□□ 0.01
CHGA-205ENST00000556098 PKD1L3Q7Z443 1732 aa15.09■□□□□ 0.01
CHGA-205ENST00000556098 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
CHGA-205ENST00000556098 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
CHGA-205ENST00000556098 HSPA6P17066 643 aa15.08■□□□□ 0
CHGA-205ENST00000556098 TMF1P82094 1093 aa15.08■□□□□ 0
CHGA-205ENST00000556098 NBPF6Q5VWK0 638 aa15.08■□□□□ 0
CHGA-205ENST00000556098 NBPF4Q96M43 638 aa15.08■□□□□ 0
CHGA-205ENST00000556098 CEP350Q5VT06 3117 aa15.07■□□□□ 0
CHGA-205ENST00000556098 GGNBP2Q9H3C7 697 aa15.07■□□□□ 0
CHGA-205ENST00000556098 CD2APQ9Y5K6 639 aa15.07■□□□□ 0
CHGA-205ENST00000556098 FLAD1Q8NFF5 587 aa15.06■□□□□ 0
CHGA-205ENST00000556098 PCDH11XQ9BZA7 1347 aa15.06■□□□□ 0
CHGA-205ENST00000556098 PCDH11YQ9BZA8 1340 aa15.06■□□□□ 0
CHGA-205ENST00000556098 RTL1A6NKG5 1358 aa15.06■□□□□ 0
CHGA-205ENST00000556098 WDR90Q96KV7 1748 aa15.05■□□□□ -0
CHGA-205ENST00000556098 KIF13BQ9NQT8 1826 aa15.05■□□□□ -0
CHGA-205ENST00000556098 KIAA1551Q9HCM1 1747 aa15.04■□□□□ -0
CHGA-205ENST00000556098 ADCY9O60503 1353 aa15.04■□□□□ -0
CHGA-205ENST00000556098 TESK2Q96S53 571 aa15.04■□□□□ -0
CHGA-205ENST00000556098 BRCA1P38398 1863 aaKnown RBP15.02■□□□□ -0
CHGA-205ENST00000556098 CGNL1Q0VF96 1302 aa15.02■□□□□ -0
CHGA-205ENST00000556098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.02■□□□□ -0
CHGA-205ENST00000556098 PPM1GO15355 546 aaPredicted RBP15.02■□□□□ -0
CHGA-205ENST00000556098 HSP90AB2PQ58FF8 381 aa15.02■□□□□ -0
CHGA-205ENST00000556098 AMIGO3Q86WK7 504 aa15.02■□□□□ -0
CHGA-205ENST00000556098 CICQ96RK0 1608 aaPredicted RBP15.02□□□□□ -0.01
CHGA-205ENST00000556098 SMARCC1Q92922 1105 aaPredicted RBP15.01□□□□□ -0.01
CHGA-205ENST00000556098 NSD3Q9BZ95 1437 aa15□□□□□ -0.01
CHGA-205ENST00000556098 GNPATO15228 680 aa15□□□□□ -0.01
CHGA-205ENST00000556098 ARFGEF1Q9Y6D6 1849 aa15□□□□□ -0.01
CHGA-205ENST00000556098 C4AP0C0L4 1744 aa15□□□□□ -0.01
CHGA-205ENST00000556098 CCDC88AQ3V6T2 1871 aa14.99□□□□□ -0.01
CHGA-205ENST00000556098 CYP27B1O15528 508 aa14.99□□□□□ -0.01
CHGA-205ENST00000556098 PUS7Q96PZ0 661 aaKnown RBP14.99□□□□□ -0.01
CHGA-205ENST00000556098 BCS1LQ9Y276 419 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms