RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 THUMPD2Q9BTF0 503 aaKnown RBP18.95■□□□□ 0.62
VPS33B-205ENST00000556096 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
VPS33B-205ENST00000556096 ALDH1L2Q3SY69 923 aa18.94■□□□□ 0.62
VPS33B-205ENST00000556096 GAS2L2Q8NHY3 880 aa18.94■□□□□ 0.62
VPS33B-205ENST00000556096 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
VPS33B-205ENST00000556096 FAM83GA6ND36 823 aa18.93■□□□□ 0.62
VPS33B-205ENST00000556096 FRAT1Q92837 279 aaPredicted RBP18.93■□□□□ 0.62
VPS33B-205ENST00000556096 COL18A1P39060 1754 aa18.93■□□□□ 0.62
VPS33B-205ENST00000556096 MTHFSDQ2M296 383 aaKnown RBP18.92■□□□□ 0.62
VPS33B-205ENST00000556096 C8orf37Q96NL8 207 aa18.92■□□□□ 0.62
VPS33B-205ENST00000556096 MBIPQ9NS73 344 aa18.92■□□□□ 0.62
VPS33B-205ENST00000556096 RGPD2P0DJD1 1756 aa18.92■□□□□ 0.62
VPS33B-205ENST00000556096 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
VPS33B-205ENST00000556096 MS4A1P11836 297 aa18.91■□□□□ 0.62
VPS33B-205ENST00000556096 AAMPQ13685 434 aa18.91■□□□□ 0.62
VPS33B-205ENST00000556096 SSH1Q8WYL5 1049 aa18.91■□□□□ 0.62
VPS33B-205ENST00000556096 BRPF1P55201 1214 aaPredicted RBP18.91■□□□□ 0.62
VPS33B-205ENST00000556096 DCTN1Q14203 1278 aa18.91■□□□□ 0.62
VPS33B-205ENST00000556096 CHRNA2Q15822 529 aa18.91■□□□□ 0.62
VPS33B-205ENST00000556096 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
VPS33B-205ENST00000556096 BCL2L13Q9BXK5 485 aa18.91■□□□□ 0.62
VPS33B-205ENST00000556096 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
VPS33B-205ENST00000556096 ZKSCAN2Q63HK3 967 aa18.9■□□□□ 0.62
VPS33B-205ENST00000556096 KIAA0232Q92628 1395 aa18.9■□□□□ 0.62
VPS33B-205ENST00000556096 CHL1O00533 1208 aa18.89■□□□□ 0.61
VPS33B-205ENST00000556096 VAMP4O75379 141 aa18.89■□□□□ 0.61
VPS33B-205ENST00000556096 PANK1Q8TE04 598 aa18.88■□□□□ 0.61
VPS33B-205ENST00000556096 CRB1P82279 1406 aa18.88■□□□□ 0.61
VPS33B-205ENST00000556096 RTF1Q92541 710 aaKnown RBP18.88■□□□□ 0.61
VPS33B-205ENST00000556096 NBPF6Q5VWK0 638 aa18.87■□□□□ 0.61
VPS33B-205ENST00000556096 MCM10Q7L590 875 aa18.87■□□□□ 0.61
VPS33B-205ENST00000556096 NBPF4Q96M43 638 aa18.87■□□□□ 0.61
VPS33B-205ENST00000556096 PRDM11Q9NQV5 511 aa18.87■□□□□ 0.61
VPS33B-205ENST00000556096 COG6Q9Y2V7 657 aa18.87■□□□□ 0.61
VPS33B-205ENST00000556096 KIF16BQ96L93 1317 aa18.87■□□□□ 0.61
VPS33B-205ENST00000556096 CPDO75976 1380 aa18.87■□□□□ 0.61
VPS33B-205ENST00000556096 ABCC6O95255 1503 aa18.87■□□□□ 0.61
VPS33B-205ENST00000556096 NGLY1Q96IV0 654 aa18.86■□□□□ 0.61
VPS33B-205ENST00000556096 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
VPS33B-205ENST00000556096 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
VPS33B-205ENST00000556096 DZIP1LQ8IYY4 767 aaKnown RBP18.86■□□□□ 0.61
VPS33B-205ENST00000556096 KDM2BQ8NHM5 1336 aa18.85■□□□□ 0.61
VPS33B-205ENST00000556096 LMO7Q8WWI1 1683 aa18.85■□□□□ 0.61
VPS33B-205ENST00000556096 RLBP1P12271 317 aa18.85■□□□□ 0.61
VPS33B-205ENST00000556096 TWISTNBQ3B726 338 aaPredicted RBP18.85■□□□□ 0.61
VPS33B-205ENST00000556096 CENPQQ7L2Z9 268 aaPredicted RBP18.85■□□□□ 0.61
VPS33B-205ENST00000556096 AXIN2Q9Y2T1 843 aa18.85■□□□□ 0.61
VPS33B-205ENST00000556096 GNAT3A8MTJ3 354 aa18.84■□□□□ 0.61
VPS33B-205ENST00000556096 ATF7IPQ6VMQ6 1270 aa18.84■□□□□ 0.61
VPS33B-205ENST00000556096 TSPYL6Q8N831 410 aa18.84■□□□□ 0.61
VPS33B-205ENST00000556096 C8orf58Q8NAV2 365 aa18.83■□□□□ 0.61
VPS33B-205ENST00000556096 ANKRD24Q8TF21 1146 aa18.83■□□□□ 0.61
VPS33B-205ENST00000556096 CLUAP1Q96AJ1 413 aa18.83■□□□□ 0.61
VPS33B-205ENST00000556096 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.61
VPS33B-205ENST00000556096 TNNQ9UQP3 1299 aa18.83■□□□□ 0.61
VPS33B-205ENST00000556096 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.61
VPS33B-205ENST00000556096 AFF2P51816 1311 aa18.83■□□□□ 0.6
VPS33B-205ENST00000556096 TRIM27P14373 513 aa18.83■□□□□ 0.6
VPS33B-205ENST00000556096 USHBP1Q8N6Y0 703 aa18.83■□□□□ 0.6
VPS33B-205ENST00000556096 PLCH1Q4KWH8 1693 aa18.83■□□□□ 0.6
VPS33B-205ENST00000556096 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.6
VPS33B-205ENST00000556096 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
VPS33B-205ENST00000556096 MVPQ14764 893 aaKnown RBP18.82■□□□□ 0.6
VPS33B-205ENST00000556096 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
VPS33B-205ENST00000556096 MRPL50Q8N5N7 158 aaKnown RBP18.82■□□□□ 0.6
VPS33B-205ENST00000556096 ARHGAP45Q92619 1136 aa18.82■□□□□ 0.6
VPS33B-205ENST00000556096 BTG4Q9NY30 223 aa18.82■□□□□ 0.6
VPS33B-205ENST00000556096 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
VPS33B-205ENST00000556096 BABAM1Q9NWV8 329 aa18.8■□□□□ 0.6
VPS33B-205ENST00000556096 COL14A1Q05707 1796 aaKnown RBP18.8■□□□□ 0.6
VPS33B-205ENST00000556096 STRN4Q9NRL3 753 aa18.8■□□□□ 0.6
VPS33B-205ENST00000556096 ERBB3P21860 1342 aa18.79■□□□□ 0.6
VPS33B-205ENST00000556096 USP21Q9UK80 565 aa18.79■□□□□ 0.6
VPS33B-205ENST00000556096 ELL2O00472 640 aaPredicted RBP18.78■□□□□ 0.6
VPS33B-205ENST00000556096 AMOTQ4VCS5 1084 aa18.78■□□□□ 0.6
VPS33B-205ENST00000556096 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
VPS33B-205ENST00000556096 RGS17Q9UGC6 210 aaPredicted RBP18.78■□□□□ 0.6
VPS33B-205ENST00000556096 TCERG1O14776 1098 aaKnown RBP18.77■□□□□ 0.6
VPS33B-205ENST00000556096 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
VPS33B-205ENST00000556096 SLIT2O94813 1529 aa18.77■□□□□ 0.59
VPS33B-205ENST00000556096 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.59
VPS33B-205ENST00000556096 DDX19BQ9UMR2 479 aa18.77■□□□□ 0.59
VPS33B-205ENST00000556096 FNBP4Q8N3X1 1017 aaPredicted RBP18.76■□□□□ 0.59
VPS33B-205ENST00000556096 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
VPS33B-205ENST00000556096 BCL9LQ86UU0 1499 aa18.76■□□□□ 0.59
VPS33B-205ENST00000556096 CEMIPQ8WUJ3 1361 aa18.75■□□□□ 0.59
VPS33B-205ENST00000556096 ILDR2Q71H61 639 aa18.75■□□□□ 0.59
VPS33B-205ENST00000556096 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
VPS33B-205ENST00000556096 TAF7Q15545 349 aaPredicted RBP18.74■□□□□ 0.59
VPS33B-205ENST00000556096 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
VPS33B-205ENST00000556096 NRAPQ86VF7 1730 aa18.74■□□□□ 0.59
VPS33B-205ENST00000556096 EVA1CP58658 441 aa18.74■□□□□ 0.59
VPS33B-205ENST00000556096 UNC5CLQ8IV45 518 aa18.74■□□□□ 0.59
VPS33B-205ENST00000556096 TMEM57Q8N5G2 664 aa18.74■□□□□ 0.59
VPS33B-205ENST00000556096 CCDC9Q9Y3X0 531 aaKnown RBP18.74■□□□□ 0.59
VPS33B-205ENST00000556096 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
VPS33B-205ENST00000556096 CSB-PGBD3P0DP91 1061 aa18.73■□□□□ 0.59
VPS33B-205ENST00000556096 MIS18AQ9NYP9 233 aa18.73■□□□□ 0.59
VPS33B-205ENST00000556096 NWD2Q9ULI1 1742 aa18.73■□□□□ 0.59
VPS33B-205ENST00000556096 PLEKHG2Q9H7P9 1386 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms