RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	RIMS2	Q9UQ26	1411 aa		7.63	□□□□□ -1.19
ATL1-208	ENST00000556067	WASHC2A	Q641Q2	1341 aa		7.63	□□□□□ -1.19
ATL1-208	ENST00000556067	APLP1	P51693	650 aa		7.63	□□□□□ -1.19
ATL1-208	ENST00000556067	NYAP1	Q6ZVC0	841 aa		7.63	□□□□□ -1.19
ATL1-208	ENST00000556067	NECTIN2	Q92692	538 aa		7.63	□□□□□ -1.19
ATL1-208	ENST00000556067	DAXX	Q9UER7	740 aa	Predicted RBP	7.63	□□□□□ -1.19
ATL1-208	ENST00000556067	A2ML1	A8K2U0	1454 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	NRXN1	Q9ULB1	1477 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	PIK3C2G	O75747	1445 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	FER1L4	A9Z1Z3	1794 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	KIF7	Q2M1P5	1343 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	KIAA1210	Q9ULL0	1709 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	CFH	P08603	1231 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	TMEM131L	A2VDJ0	1609 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	NEXMIF	Q5QGS0	1516 aa		7.62	□□□□□ -1.19
ATL1-208	ENST00000556067	SLC24A3	Q9HC58	644 aa		7.61	□□□□□ -1.19
ATL1-208	ENST00000556067	TRAK1	Q9UPV9	953 aa		7.61	□□□□□ -1.19
ATL1-208	ENST00000556067	PPL	O60437	1756 aa		7.61	□□□□□ -1.19
ATL1-208	ENST00000556067	TMEM2	Q9UHN6	1383 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	SLC10A3	P09131	477 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	COPS2	P61201	443 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	TTLL12	Q14166	644 aa	Predicted RBP	7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	KMT5B	Q4FZB7	885 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	TMEM132E	Q6IEE7	984 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	TXNDC2	Q86VQ3	553 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	POGK	Q9P215	609 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	STK26	Q9P289	416 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	IFT172	Q9UG01	1749 aa		7.6	□□□□□ -1.19
ATL1-208	ENST00000556067	SETBP1	Q9Y6X0	1596 aa		7.59	□□□□□ -1.19
ATL1-208	ENST00000556067	C11orf95	C9JLR9	678 aa	Predicted RBP	7.59	□□□□□ -1.19
ATL1-208	ENST00000556067	SULF1	Q8IWU6	871 aa		7.59	□□□□□ -1.19
ATL1-208	ENST00000556067	C3	P01024	1663 aa		7.58	□□□□□ -1.2
ATL1-208	ENST00000556067	RIMS1	Q86UR5	1692 aa	Known RBP	7.58	□□□□□ -1.2
ATL1-208	ENST00000556067	AK7	Q96M32	723 aa		7.58	□□□□□ -1.2
ATL1-208	ENST00000556067	TESK2	Q96S53	571 aa		7.58	□□□□□ -1.2
ATL1-208	ENST00000556067	PRR14	Q9BWN1	585 aa		7.58	□□□□□ -1.2
ATL1-208	ENST00000556067	PCDHB3	Q9Y5E6	796 aa		7.58	□□□□□ -1.2
ATL1-208	ENST00000556067	KDM5A	P29375	1690 aa	Known RBP	7.57	□□□□□ -1.2
ATL1-208	ENST00000556067	EVC2	Q86UK5	1308 aa		7.57	□□□□□ -1.2
ATL1-208	ENST00000556067	CLCN1	P35523	988 aa		7.57	□□□□□ -1.2
ATL1-208	ENST00000556067	ANKLE2	Q86XL3	938 aa		7.57	□□□□□ -1.2
ATL1-208	ENST00000556067	MTR	Q99707	1265 aa		7.57	□□□□□ -1.2
ATL1-208	ENST00000556067	GPCPD1	Q9NPB8	672 aa		7.57	□□□□□ -1.2
ATL1-208	ENST00000556067	YTHDC2	Q9H6S0	1430 aa	Known RBP	7.56	□□□□□ -1.2
ATL1-208	ENST00000556067	CCER2	I3L3R5	266 aa		7.56	□□□□□ -1.2
ATL1-208	ENST00000556067	KCNC4	Q03721	635 aa		7.56	□□□□□ -1.2
ATL1-208	ENST00000556067	IQGAP1	P46940	1657 aa		7.56	□□□□□ -1.2
ATL1-208	ENST00000556067	ADAMTSL3	P82987	1691 aa		7.56	□□□□□ -1.2
ATL1-208	ENST00000556067	PLEKHG1	Q9ULL1	1385 aa		7.56	□□□□□ -1.2
ATL1-208	ENST00000556067	TRIM66	O15016	1216 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	PUS10	Q3MIT2	529 aa	Known RBP	7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	BLOC1S3	Q6QNY0	202 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	PUS7	Q96PZ0	661 aa	Known RBP	7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	PRAM1	Q96QH2	718 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	LRPPRC	P42704	1394 aa	Known RBP	7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	DISP3	Q9P2K9	1392 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	ALK	Q9UM73	1620 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	SBNO2	Q9Y2G9	1366 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	UBR1	Q8IWV7	1749 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	PTPRM	P28827	1452 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	MYO5B	Q9ULV0	1848 aa		7.55	□□□□□ -1.2
ATL1-208	ENST00000556067	ADGRB1	O14514	1584 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	ACTN4	O43707	911 aa	Known RBP	7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	LTK	P29376	864 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	SRPK2	P78362	688 aa	Known RBP	7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	TJAP1	Q5JTD0	557 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	TMC1	Q8TDI8	760 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	ZNF516	Q92618	1163 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	SIRT1	Q96EB6	747 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	REPIN1	Q9BWE0	567 aa	Known RBP	7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	IL21	Q9HBE4	155 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	KNSTRN	Q9Y448	316 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	TBX22	Q9Y458	520 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	ABCC11	Q96J66	1382 aa		7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	7.54	□□□□□ -1.2
ATL1-208	ENST00000556067	SLIT1	O75093	1534 aa		7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	MYO3A	Q8NEV4	1616 aa		7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	POLR1A	O95602	1720 aa	Predicted RBP	7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	ITGBL1	O95965	494 aa	Predicted RBP	7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	CENPB	P07199	599 aa	Predicted RBP	7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	CNGB1	Q14028	1251 aa	Predicted RBP	7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	AMHR2	Q16671	573 aa		7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	SLC26A8	Q96RN1	970 aa		7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	PANK3	Q9H999	370 aa		7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	KTN1	Q86UP2	1357 aa	Known RBP	7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	ARHGAP23	Q9P227	1491 aa		7.53	□□□□□ -1.2
ATL1-208	ENST00000556067	CD46	P15529	392 aa		7.52	□□□□□ -1.21
ATL1-208	ENST00000556067	GCGR	P47871	477 aa		7.52	□□□□□ -1.21
ATL1-208	ENST00000556067	FUT2	Q10981	343 aa		7.52	□□□□□ -1.21
ATL1-208	ENST00000556067	RALBP1	Q15311	655 aa		7.52	□□□□□ -1.21
ATL1-208	ENST00000556067	TPRN	Q4KMQ1	711 aa		7.52	□□□□□ -1.21
ATL1-208	ENST00000556067	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.52	□□□□□ -1.21
ATL1-208	ENST00000556067	YTHDC1	Q96MU7	727 aa	Known RBP	7.52	□□□□□ -1.21
ATL1-208	ENST00000556067	PRKRIP1	Q9H875	184 aa	Predicted RBP	7.52	□□□□□ -1.21
ATL1-208	ENST00000556067	MET	P08581	1390 aa		7.51	□□□□□ -1.21
ATL1-208	ENST00000556067	SSTR3	P32745	418 aa	Predicted RBP	7.51	□□□□□ -1.21
ATL1-208	ENST00000556067	PDE4D	Q08499	809 aa		7.51	□□□□□ -1.21

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