RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TCP11L2Q8N4U5 519 aa14.55□□□□□ -0.08
TMEM260-208ENST00000555905 NGEFQ8N5V2 710 aa14.55□□□□□ -0.08
TMEM260-208ENST00000555905 CRB1P82279 1406 aa14.55□□□□□ -0.08
TMEM260-208ENST00000555905 SLIT2O94813 1529 aa14.55□□□□□ -0.08
TMEM260-208ENST00000555905 CARD10Q9BWT7 1032 aa14.54□□□□□ -0.08
TMEM260-208ENST00000555905 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
TMEM260-208ENST00000555905 RAPGEF4Q8WZA2 1011 aa14.53□□□□□ -0.08
TMEM260-208ENST00000555905 PHACTR3Q96KR7 559 aa14.53□□□□□ -0.08
TMEM260-208ENST00000555905 ZBED9Q6R2W3 1325 aa14.52□□□□□ -0.08
TMEM260-208ENST00000555905 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
TMEM260-208ENST00000555905 FNBP4Q8N3X1 1017 aaPredicted RBP14.52□□□□□ -0.09
TMEM260-208ENST00000555905 SALL2Q9Y467 1007 aaPredicted RBP14.52□□□□□ -0.09
TMEM260-208ENST00000555905 TATP17735 454 aaPredicted RBP14.51□□□□□ -0.09
TMEM260-208ENST00000555905 TMPOP42166 694 aaKnown RBP14.51□□□□□ -0.09
TMEM260-208ENST00000555905 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
TMEM260-208ENST00000555905 NFE2L2Q16236 605 aa14.51□□□□□ -0.09
TMEM260-208ENST00000555905 RRP7AQ9Y3A4 280 aaKnown RBP14.51□□□□□ -0.09
TMEM260-208ENST00000555905 PLEKHG2Q9H7P9 1386 aa14.5□□□□□ -0.09
TMEM260-208ENST00000555905 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.5□□□□□ -0.09
TMEM260-208ENST00000555905 PARP4Q9UKK3 1724 aaKnown RBP14.5□□□□□ -0.09
TMEM260-208ENST00000555905 RIPK4P57078 832 aa14.5□□□□□ -0.09
TMEM260-208ENST00000555905 AMOTQ4VCS5 1084 aa14.5□□□□□ -0.09
TMEM260-208ENST00000555905 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
TMEM260-208ENST00000555905 GAS2L2Q8NHY3 880 aa14.5□□□□□ -0.09
TMEM260-208ENST00000555905 LMOD3Q0VAK6 560 aa14.49□□□□□ -0.09
TMEM260-208ENST00000555905 USP35Q9P2H5 1018 aa14.49□□□□□ -0.09
TMEM260-208ENST00000555905 USP21Q9UK80 565 aa14.49□□□□□ -0.09
TMEM260-208ENST00000555905 CCDC9Q9Y3X0 531 aaKnown RBP14.49□□□□□ -0.09
TMEM260-208ENST00000555905 BCL9LQ86UU0 1499 aa14.49□□□□□ -0.09
TMEM260-208ENST00000555905 DLG5Q8TDM6 1919 aa14.49□□□□□ -0.09
TMEM260-208ENST00000555905 AFF2P51816 1311 aa14.48□□□□□ -0.09
TMEM260-208ENST00000555905 IL2RBP14784 551 aa14.48□□□□□ -0.09
TMEM260-208ENST00000555905 CCDC27Q2M243 656 aa14.48□□□□□ -0.09
TMEM260-208ENST00000555905 MTHFSDQ2M296 383 aaKnown RBP14.48□□□□□ -0.09
TMEM260-208ENST00000555905 SPG7Q9UQ90 795 aa14.48□□□□□ -0.09
TMEM260-208ENST00000555905 SPATA31A1Q5TZJ5 1347 aa14.47□□□□□ -0.09
TMEM260-208ENST00000555905 SPATA31A5Q5VU36 1347 aa14.47□□□□□ -0.09
TMEM260-208ENST00000555905 SPATA31A7Q8IWB4 1347 aa14.47□□□□□ -0.09
TMEM260-208ENST00000555905 MEGF6O75095 1541 aa14.47□□□□□ -0.09
TMEM260-208ENST00000555905 VPS72Q15906 364 aa14.47□□□□□ -0.09
TMEM260-208ENST00000555905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■■■■ 28.3
TMEM260-208ENST00000555905 THRAP3Q9Y2W1 955 aaKnown RBP14.47□□□□□ -0.09
TMEM260-208ENST00000555905 OVOS2A0A0G2JMS6 1433 aa14.47□□□□□ -0.09
TMEM260-208ENST00000555905 WNK3Q9BYP7 1800 aa14.46□□□□□ -0.09
TMEM260-208ENST00000555905 WWC1Q8IX03 1113 aa14.46□□□□□ -0.09
TMEM260-208ENST00000555905 CDCA7Q9BWT1 371 aaPredicted RBP14.46□□□□□ -0.09
TMEM260-208ENST00000555905 PKD1L3Q7Z443 1732 aa14.46□□□□□ -0.1
TMEM260-208ENST00000555905 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
TMEM260-208ENST00000555905 C1orf141Q5JVX7 400 aa14.45□□□□□ -0.1
TMEM260-208ENST00000555905 ZNF530Q6P9A1 599 aaPredicted RBP14.45□□□□□ -0.1
TMEM260-208ENST00000555905 RTF1Q92541 710 aaKnown RBP14.45□□□□□ -0.1
TMEM260-208ENST00000555905 TRIM35Q9UPQ4 493 aa14.45□□□□□ -0.1
TMEM260-208ENST00000555905 MAP3K5Q99683 1374 aa14.45□□□□□ -0.1
TMEM260-208ENST00000555905 GNAT3A8MTJ3 354 aa14.44□□□□□ -0.1
TMEM260-208ENST00000555905 HTATSF1O43719 755 aaKnown RBP14.44□□□□□ -0.1
TMEM260-208ENST00000555905 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
TMEM260-208ENST00000555905 CALD1Q05682 793 aaKnown RBP14.44□□□□□ -0.1
TMEM260-208ENST00000555905 WDR63Q8IWG1 891 aa14.44□□□□□ -0.1
TMEM260-208ENST00000555905 ZCRB1Q8TBF4 217 aaKnown RBP14.44□□□□□ -0.1
TMEM260-208ENST00000555905 ZNF521Q96K83 1311 aa14.43□□□□□ -0.1
TMEM260-208ENST00000555905 GOLGA2Q08379 1002 aa14.43□□□□□ -0.1
TMEM260-208ENST00000555905 AKAP4Q5JQC9 854 aa14.43□□□□□ -0.1
TMEM260-208ENST00000555905 BARGINQ6ZT62 677 aa14.43□□□□□ -0.1
TMEM260-208ENST00000555905 TRPC5Q9UL62 973 aaPredicted RBP14.43□□□□□ -0.1
TMEM260-208ENST00000555905 DISP2A7MBM2 1401 aa14.42□□□□□ -0.1
TMEM260-208ENST00000555905 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
TMEM260-208ENST00000555905 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
TMEM260-208ENST00000555905 ATRNO75882 1429 aa14.41□□□□□ -0.1
TMEM260-208ENST00000555905 POLA2Q14181 598 aa14.41□□□□□ -0.1
TMEM260-208ENST00000555905 ZNF772Q68DY9 489 aaPredicted RBP14.41□□□□□ -0.1
TMEM260-208ENST00000555905 IFNL2Q8IZJ0 200 aa14.41□□□□□ -0.1
TMEM260-208ENST00000555905 IL16Q14005 1332 aa14.41□□□□□ -0.1
TMEM260-208ENST00000555905 EXOC5O00471 708 aa14.4□□□□□ -0.1
TMEM260-208ENST00000555905 HSP90AB1P08238 724 aaKnown RBP14.4□□□□□ -0.1
TMEM260-208ENST00000555905 GJD4Q96KN9 370 aaPredicted RBP14.4□□□□□ -0.1
TMEM260-208ENST00000555905 QTRT2Q9H974 415 aaKnown RBP14.4□□□□□ -0.1
TMEM260-208ENST00000555905 VIRMAQ69YN4 1812 aaKnown RBP14.39□□□□□ -0.11
TMEM260-208ENST00000555905 SHANK3Q9BYB0 1731 aa14.39□□□□□ -0.11
TMEM260-208ENST00000555905 E9PSI1 815 aa14.39□□□□□ -0.11
TMEM260-208ENST00000555905 PHKG2P15735 406 aa14.39□□□□□ -0.11
TMEM260-208ENST00000555905 DCTN1Q14203 1278 aa14.39□□□□□ -0.11
TMEM260-208ENST00000555905 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
TMEM260-208ENST00000555905 MCM10Q7L590 875 aa14.39□□□□□ -0.11
TMEM260-208ENST00000555905 DDB1Q16531 1140 aa14.38□□□□□ -0.11
TMEM260-208ENST00000555905 DDX54Q8TDD1 881 aaKnown RBP14.38□□□□□ -0.11
TMEM260-208ENST00000555905 CDCA7LQ96GN5 454 aa14.38□□□□□ -0.11
TMEM260-208ENST00000555905 THUMPD2Q9BTF0 503 aaKnown RBP14.38□□□□□ -0.11
TMEM260-208ENST00000555905 MYH16Q9H6N6 1097 aa14.38□□□□□ -0.11
TMEM260-208ENST00000555905 TNS2Q63HR2 1409 aa14.38□□□□□ -0.11
TMEM260-208ENST00000555905 A0A0G2JS52 829 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 CYP27B1O15528 508 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 MYT1Q01538 1121 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 SLFN5Q08AF3 891 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 MPRIPQ6WCQ1 1025 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 IL17REQ8NFR9 667 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 IFT57Q9NWB7 429 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 GLI3P10071 1580 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 LRRC37A3O60309 1634 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 SCN11AQ9UI33 1791 aa14.37□□□□□ -0.11
TMEM260-208ENST00000555905 RNMTO43148 476 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms