RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 HMOX1P09601 288 aa8.79□□□□□ -1
TDP1-213ENST00000555880 NUCB1Q02818 461 aa8.79□□□□□ -1
TDP1-213ENST00000555880 ARHGAP45Q92619 1136 aa8.79□□□□□ -1
TDP1-213ENST00000555880 ANTXR1Q9H6X2 564 aa8.79□□□□□ -1
TDP1-213ENST00000555880 KNDC1Q76NI1 1749 aa8.78□□□□□ -1
TDP1-213ENST00000555880 MON2Q7Z3U7 1717 aa8.78□□□□□ -1
TDP1-213ENST00000555880 CPSF1Q10570 1443 aaKnown RBP8.78□□□□□ -1
TDP1-213ENST00000555880 WASLO00401 505 aaPredicted RBP8.78□□□□□ -1
TDP1-213ENST00000555880 ZNF467Q7Z7K2 595 aaPredicted RBP8.78□□□□□ -1
TDP1-213ENST00000555880 HSCBQ8IWL3 235 aa8.78□□□□□ -1
TDP1-213ENST00000555880 COG3Q96JB2 828 aa8.78□□□□□ -1
TDP1-213ENST00000555880 AATKQ6ZMQ8 1374 aa8.78□□□□□ -1
TDP1-213ENST00000555880 TNRQ92752 1358 aa8.78□□□□□ -1
TDP1-213ENST00000555880 PTCH1Q13635 1447 aa8.77□□□□□ -1
TDP1-213ENST00000555880 IRX5P78411 483 aaPredicted RBP8.77□□□□□ -1.01
TDP1-213ENST00000555880 CHD1LQ86WJ1 897 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 GCC1Q96CN9 775 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 BRPF3Q9ULD4 1205 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 DLG5Q8TDM6 1919 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 AKAP12Q02952 1782 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 NRXN3Q9Y4C0 1643 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 CHRM1P11229 460 aaPredicted RBP8.77□□□□□ -1.01
TDP1-213ENST00000555880 PHACTR3Q96KR7 559 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 CHMP5Q9NZZ3 219 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 EMILIN1Q9Y6C2 1016 aa8.77□□□□□ -1.01
TDP1-213ENST00000555880 PIK3R4Q99570 1358 aa8.76□□□□□ -1.01
TDP1-213ENST00000555880 EIF5BO60841 1220 aaKnown RBP8.76□□□□□ -1.01
TDP1-213ENST00000555880 PLCG2P16885 1265 aa8.76□□□□□ -1.01
TDP1-213ENST00000555880 IL13P35225 146 aa8.76□□□□□ -1.01
TDP1-213ENST00000555880 HAP1P54257 671 aaPredicted RBP8.76□□□□□ -1.01
TDP1-213ENST00000555880 L1TD1Q5T7N2 865 aaKnown RBP8.76□□□□□ -1.01
TDP1-213ENST00000555880 NME9Q86XW9 330 aa8.76□□□□□ -1.01
TDP1-213ENST00000555880 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
TDP1-213ENST00000555880 API5Q9BZZ5 524 aaKnown RBP8.76□□□□□ -1.01
TDP1-213ENST00000555880 LNPKQ9C0E8 428 aa8.76□□□□□ -1.01
TDP1-213ENST00000555880 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
TDP1-213ENST00000555880 VAMP4O75379 141 aa8.75□□□□□ -1.01
TDP1-213ENST00000555880 TWISTNBQ3B726 338 aaPredicted RBP8.75□□□□□ -1.01
TDP1-213ENST00000555880 BMP2KLQ5H9B9 411 aa8.75□□□□□ -1.01
TDP1-213ENST00000555880 NUDT16Q96DE0 195 aaKnown RBP8.75□□□□□ -1.01
TDP1-213ENST00000555880 CFAP44Q96MT7 982 aa8.75□□□□□ -1.01
TDP1-213ENST00000555880 MBIPQ9NS73 344 aa8.75□□□□□ -1.01
TDP1-213ENST00000555880 CPS1P31327 1500 aa8.75□□□□□ -1.01
TDP1-213ENST00000555880 C3P01024 1663 aa8.75□□□□□ -1.01
TDP1-213ENST00000555880 ZBTB7BO15156 539 aaPredicted RBP8.74□□□□□ -1.01
TDP1-213ENST00000555880 FBLN1P23142 703 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 ANKRD45Q5TZF3 282 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 SPRYD3Q8NCJ5 442 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 SIRT1Q96EB6 747 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 THUMPD2Q9BTF0 503 aaKnown RBP8.74□□□□□ -1.01
TDP1-213ENST00000555880 TECPR2O15040 1411 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 ABCC4O15439 1325 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 ZNF853P0CG23 659 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 RBM25P49756 843 aaKnown RBP8.74□□□□□ -1.01
TDP1-213ENST00000555880 TXNDC2Q86VQ3 553 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 NRKQ7Z2Y5 1582 aa8.74□□□□□ -1.01
TDP1-213ENST00000555880 METP08581 1390 aa8.73□□□□□ -1.01
TDP1-213ENST00000555880 KIF24Q5T7B8 1368 aa8.73□□□□□ -1.01
TDP1-213ENST00000555880 EID1Q9Y6B2 187 aa8.73□□□□□ -1.01
TDP1-213ENST00000555880 ELL2O00472 640 aaPredicted RBP8.72□□□□□ -1.01
TDP1-213ENST00000555880 MCM4P33991 863 aa8.72□□□□□ -1.01
TDP1-213ENST00000555880 PSEN1P49768 467 aa8.72□□□□□ -1.01
TDP1-213ENST00000555880 TSPYL6Q8N831 410 aa8.72□□□□□ -1.01
TDP1-213ENST00000555880 SNX21Q969T3 373 aa8.72□□□□□ -1.01
TDP1-213ENST00000555880 DDX11L8A8MPP1 907 aa8.72□□□□□ -1.01
TDP1-213ENST00000555880 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
TDP1-213ENST00000555880 CEBPAP49715 358 aaPredicted RBP8.72□□□□□ -1.01
TDP1-213ENST00000555880 RRS1Q15050 365 aaKnown RBP8.72□□□□□ -1.01
TDP1-213ENST00000555880 C1orf115Q9H7X2 142 aa8.72□□□□□ -1.01
TDP1-213ENST00000555880 HSP90AA1P07900 732 aaKnown RBP8.71□□□□□ -1.01
TDP1-213ENST00000555880 OCEL1Q9H607 264 aa8.71□□□□□ -1.01
TDP1-213ENST00000555880 TMEM2Q9UHN6 1383 aa8.71□□□□□ -1.02
TDP1-213ENST00000555880 POTEMA6NI47 508 aa8.7□□□□□ -1.02
TDP1-213ENST00000555880 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
TDP1-213ENST00000555880 C8orf58Q8NAV2 365 aa8.7□□□□□ -1.02
TDP1-213ENST00000555880 NCOA3Q9Y6Q9 1424 aa8.7□□□□□ -1.02
TDP1-213ENST00000555880 GOLGA6L3A6NEY3 463 aa8.7□□□□□ -1.02
TDP1-213ENST00000555880 CDC45O75419 566 aa8.7□□□□□ -1.02
TDP1-213ENST00000555880 PTMSP20962 102 aa8.7□□□□□ -1.02
TDP1-213ENST00000555880 THEMISQ8N1K5 641 aaPredicted RBP8.7□□□□□ -1.02
TDP1-213ENST00000555880 TOPAZ1Q8N9V7 1692 aa8.7□□□□□ -1.02
TDP1-213ENST00000555880 UBR1Q8IWV7 1749 aa8.7□□□□□ -1.02
TDP1-213ENST00000555880 FAM83GA6ND36 823 aa8.69□□□□□ -1.02
TDP1-213ENST00000555880 TBC1D9Q6ZT07 1266 aa8.69□□□□□ -1.02
TDP1-213ENST00000555880 FAM43AQ8N2R8 423 aa8.69□□□□□ -1.02
TDP1-213ENST00000555880 GBP4Q96PP9 640 aa8.69□□□□□ -1.02
TDP1-213ENST00000555880 NALCNQ8IZF0 1738 aa8.69□□□□□ -1.02
TDP1-213ENST00000555880 TRAK2O60296 914 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 PDAP1Q13442 181 aaKnown RBP8.68□□□□□ -1.02
TDP1-213ENST00000555880 EIF4A2Q14240 407 aaKnown RBP8.68□□□□□ -1.02
TDP1-213ENST00000555880 INTS3Q68E01 1043 aaKnown RBP8.68□□□□□ -1.02
TDP1-213ENST00000555880 SULT6B1Q6IMI4 303 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 POTEGQ6S5H5 508 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 SIRT2Q8IXJ6 389 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 TTC21BQ7Z4L5 1316 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 KIAA0232Q92628 1395 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 DCTN1Q14203 1278 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 CASC1Q6TDU7 716 aa8.68□□□□□ -1.02
TDP1-213ENST00000555880 PDCD7Q8N8D1 485 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms