RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 FAM208AQ9UK61 1670 aaKnown RBP27.27■■□□□ 1.96
FOXN3-211ENST00000555855 PNPLA7Q6ZV29 1317 aa27.26■■□□□ 1.95
FOXN3-211ENST00000555855 KCNQ4P56696 695 aa27.26■■□□□ 1.95
FOXN3-211ENST00000555855 PELP1Q8IZL8 1130 aaKnown RBP27.24■■□□□ 1.95
FOXN3-211ENST00000555855 CCNL1Q9UK58 526 aaPredicted RBP27.23■■□□□ 1.95
FOXN3-211ENST00000555855 MSH5O43196 834 aa27.22■■□□□ 1.95
FOXN3-211ENST00000555855 RAPGEF4Q8WZA2 1011 aa27.22■■□□□ 1.95
FOXN3-211ENST00000555855 CGNL1Q0VF96 1302 aa27.21■■□□□ 1.95
FOXN3-211ENST00000555855 HMGB2P26583 209 aaKnown RBP27.21■■□□□ 1.95
FOXN3-211ENST00000555855 NBPF6Q5VWK0 638 aa27.21■■□□□ 1.95
FOXN3-211ENST00000555855 NBPF4Q96M43 638 aa27.21■■□□□ 1.95
FOXN3-211ENST00000555855 RRS1Q15050 365 aaKnown RBP27.2■■□□□ 1.94
FOXN3-211ENST00000555855 USP47Q96K76 1375 aa27.2■■□□□ 1.94
FOXN3-211ENST00000555855 FYB1O15117 783 aa27.19■■□□□ 1.94
FOXN3-211ENST00000555855 TMF1P82094 1093 aa27.19■■□□□ 1.94
FOXN3-211ENST00000555855 QSER1Q2KHR3 1735 aa27.19■■□□□ 1.94
FOXN3-211ENST00000555855 TATP17735 454 aaPredicted RBP27.18■■□□□ 1.94
FOXN3-211ENST00000555855 C1QTNF8P60827 252 aa27.18■■□□□ 1.94
FOXN3-211ENST00000555855 GGNBP2Q9H3C7 697 aa27.18■■□□□ 1.94
FOXN3-211ENST00000555855 RTL1A6NKG5 1358 aa27.18■■□□□ 1.94
FOXN3-211ENST00000555855 USHBP1Q8N6Y0 703 aa27.16■■□□□ 1.94
FOXN3-211ENST00000555855 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
FOXN3-211ENST00000555855 RGPD2P0DJD1 1756 aa27.15■■□□□ 1.94
FOXN3-211ENST00000555855 NSD2O96028 1365 aa27.15■■□□□ 1.94
FOXN3-211ENST00000555855 SENP3-EIF4A1A0A087X0R7 540 aa27.15■■□□□ 1.94
FOXN3-211ENST00000555855 MEGF6O75095 1541 aa27.15■■□□□ 1.94
FOXN3-211ENST00000555855 DOT1LQ8TEK3 1739 aa27.14■■□□□ 1.94
FOXN3-211ENST00000555855 COL23A1Q86Y22 540 aaPredicted RBP27.14■■□□□ 1.94
FOXN3-211ENST00000555855 LY75O60449 1722 aa27.13■■□□□ 1.93
FOXN3-211ENST00000555855 GRIN3BO60391 1043 aa27.13■■□□□ 1.93
FOXN3-211ENST00000555855 NLGN2Q8NFZ4 835 aa27.13■■□□□ 1.93
FOXN3-211ENST00000555855 UTRNP46939 3433 aa27.13■■□□□ 1.93
FOXN3-211ENST00000555855 CDCA8Q53HL2 280 aa27.12■■□□□ 1.93
FOXN3-211ENST00000555855 FLAD1Q8NFF5 587 aa27.11■■□□□ 1.93
FOXN3-211ENST00000555855 HSP90AB2PQ58FF8 381 aa27.1■■□□□ 1.93
FOXN3-211ENST00000555855 COL24A1Q17RW2 1714 aa27.1■■□□□ 1.93
FOXN3-211ENST00000555855 PCDH11XQ9BZA7 1347 aa27.09■■□□□ 1.93
FOXN3-211ENST00000555855 PCDH11YQ9BZA8 1340 aa27.09■■□□□ 1.93
FOXN3-211ENST00000555855 GIGYF1O75420 1035 aaPredicted RBP27.08■■□□□ 1.93
FOXN3-211ENST00000555855 MPRIPQ6WCQ1 1025 aa27.08■■□□□ 1.93
FOXN3-211ENST00000555855 TUBGCP6Q96RT7 1819 aa27.08■■□□□ 1.93
FOXN3-211ENST00000555855 INSRP06213 1382 aa27.08■■□□□ 1.93
FOXN3-211ENST00000555855 SHANK3Q9BYB0 1731 aa27.07■■□□□ 1.92
FOXN3-211ENST00000555855 MSL1Q68DK7 614 aa27.06■■□□□ 1.92
FOXN3-211ENST00000555855 SMARCC1Q92922 1105 aaPredicted RBP27.05■■□□□ 1.92
FOXN3-211ENST00000555855 FLT4P35916 1363 aa27.05■■□□□ 1.92
FOXN3-211ENST00000555855 KIF24Q5T7B8 1368 aa27.05■■□□□ 1.92
FOXN3-211ENST00000555855 CD2APQ9Y5K6 639 aa27.03■■□□□ 1.92
FOXN3-211ENST00000555855 PALLDQ8WX93 1383 aa27.02■■□□□ 1.92
FOXN3-211ENST00000555855 YBX3P16989 372 aaKnown RBP eCLIP27.02■■□□□ 1.92
FOXN3-211ENST00000555855 CYP27B1O15528 508 aa27.01■■□□□ 1.91
FOXN3-211ENST00000555855 AK7Q96M32 723 aa27■■□□□ 1.91
FOXN3-211ENST00000555855 PPM1GO15355 546 aaPredicted RBP26.99■■□□□ 1.91
FOXN3-211ENST00000555855 SPG7Q9UQ90 795 aa26.98■■□□□ 1.91
FOXN3-211ENST00000555855 EMILIN1Q9Y6C2 1016 aa26.97■■□□□ 1.91
FOXN3-211ENST00000555855 CARD14Q9BXL6 1004 aa26.96■■□□□ 1.91
FOXN3-211ENST00000555855 PIGBQ92521 554 aa26.95■■□□□ 1.9
FOXN3-211ENST00000555855 C5P01031 1676 aa26.95■■□□□ 1.9
FOXN3-211ENST00000555855 NKX1-1Q15270 411 aaPredicted RBP26.94■■□□□ 1.9
FOXN3-211ENST00000555855 KIF20BQ96Q89 1820 aa26.93■■□□□ 1.9
FOXN3-211ENST00000555855 PHF14O94880 888 aa26.92■■□□□ 1.9
FOXN3-211ENST00000555855 TAF1LQ8IZX4 1826 aa26.9■■□□□ 1.9
FOXN3-211ENST00000555855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.9■■□□□ 1.9
FOXN3-211ENST00000555855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.9■■□□□ 1.97e-16■□□□□ 11.1
FOXN3-211ENST00000555855 NSD3Q9BZ95 1437 aa26.9■■□□□ 1.9
FOXN3-211ENST00000555855 WASHC2AQ641Q2 1341 aa26.9■■□□□ 1.9
FOXN3-211ENST00000555855 ITGB4P16144 1822 aa26.89■■□□□ 1.9
FOXN3-211ENST00000555855 TMOD3Q9NYL9 352 aa26.89■■□□□ 1.9
FOXN3-211ENST00000555855 LOC102724428A0A0B4J2F2 783 aa26.88■■□□□ 1.89
FOXN3-211ENST00000555855 SSFA2P28290 1259 aa26.88■■□□□ 1.89
FOXN3-211ENST00000555855 SIK1P57059 783 aa26.88■■□□□ 1.89
FOXN3-211ENST00000555855 EYA1Q99502 592 aa26.88■■□□□ 1.89
FOXN3-211ENST00000555855 IFNL2Q8IZJ0 200 aa26.87■■□□□ 1.89
FOXN3-211ENST00000555855 GPBP1L1Q9HC44 474 aaPredicted RBP26.87■■□□□ 1.89
FOXN3-211ENST00000555855 C4BP0C0L5 1744 aa26.87■■□□□ 1.89
FOXN3-211ENST00000555855 ATP10DQ9P241 1426 aa26.85■■□□□ 1.89
FOXN3-211ENST00000555855 ATP6V1AP38606 617 aa26.85■■□□□ 1.89
FOXN3-211ENST00000555855 SMIM5Q71RC9 77 aa26.85■■□□□ 1.89
FOXN3-211ENST00000555855 AMIGO3Q86WK7 504 aa26.84■■□□□ 1.89
FOXN3-211ENST00000555855 GOLGB1Q14789 3259 aaKnown RBP26.83■■□□□ 1.89
FOXN3-211ENST00000555855 TRIM26Q12899 539 aaPredicted RBP26.83■■□□□ 1.89
FOXN3-211ENST00000555855 LINC00116Q8NCU8 138 aa26.83■■□□□ 1.89
FOXN3-211ENST00000555855 POLKQ9UBT6 870 aa26.83■■□□□ 1.89
FOXN3-211ENST00000555855 ASAP1Q9ULH1 1129 aa26.83■■□□□ 1.89
FOXN3-211ENST00000555855 IGSF1Q8N6C5 1336 aa26.83■■□□□ 1.89
FOXN3-211ENST00000555855 PKD1L3Q7Z443 1732 aa26.82■■□□□ 1.88
FOXN3-211ENST00000555855 PHKG2P15735 406 aa26.82■■□□□ 1.88
FOXN3-211ENST00000555855 TOGARAM1Q9Y4F4 1720 aa26.82■■□□□ 1.88
FOXN3-211ENST00000555855 NCAPD2Q15021 1401 aa26.82■■□□□ 1.88
FOXN3-211ENST00000555855 MAP2P11137 1827 aaKnown RBP26.81■■□□□ 1.88
FOXN3-211ENST00000555855 GNPATO15228 680 aa26.81■■□□□ 1.88
FOXN3-211ENST00000555855 POLR3GLQ9BT43 218 aa26.81■■□□□ 1.88
FOXN3-211ENST00000555855 TIMELESSQ9UNS1 1208 aa26.81■■□□□ 1.88
FOXN3-211ENST00000555855 WWC3Q9ULE0 1092 aa26.8■■□□□ 1.88
FOXN3-211ENST00000555855 UBR3Q6ZT12 1888 aa26.79■■□□□ 1.88
FOXN3-211ENST00000555855 ITPK1Q13572 414 aa26.79■■□□□ 1.88
FOXN3-211ENST00000555855 ZNF526Q8TF50 670 aaPredicted RBP26.78■■□□□ 1.88
FOXN3-211ENST00000555855 ATG3Q9NT62 314 aa26.78■■□□□ 1.88
FOXN3-211ENST00000555855 TNNT2P45379 298 aaPredicted RBP26.77■■□□□ 1.88
FOXN3-211ENST00000555855 EIF4A2Q14240 407 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms