RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 NCAPD2Q15021 1401 aa30.88■■■□□ 2.53
CDKN3-208ENST00000555837 DEFB132Q7Z7B7 95 aa30.87■■■□□ 2.53
CDKN3-208ENST00000555837 CFAP53Q96M91 514 aa30.87■■■□□ 2.53
CDKN3-208ENST00000555837 MEGF6O75095 1541 aa30.86■■■□□ 2.53
CDKN3-208ENST00000555837 IGSF1Q8N6C5 1336 aa30.84■■■□□ 2.53
CDKN3-208ENST00000555837 PLSCR1O15162 318 aa30.83■■■□□ 2.53
CDKN3-208ENST00000555837 EN1Q05925 392 aaPredicted RBP30.83■■■□□ 2.53
CDKN3-208ENST00000555837 CNGB1Q14028 1251 aaPredicted RBP30.83■■■□□ 2.53
CDKN3-208ENST00000555837 TNS1Q9HBL0 1735 aaKnown RBP30.83■■■□□ 2.53
CDKN3-208ENST00000555837 DIAPH1O60610 1272 aaKnown RBP30.82■■■□□ 2.52
CDKN3-208ENST00000555837 SBF2Q86WG5 1849 aa30.8■■■□□ 2.52
CDKN3-208ENST00000555837 AMOTQ4VCS5 1084 aa30.79■■■□□ 2.52
CDKN3-208ENST00000555837 HMGB2P26583 209 aaKnown RBP30.78■■■□□ 2.52
CDKN3-208ENST00000555837 IL13P35225 146 aa30.78■■■□□ 2.52
CDKN3-208ENST00000555837 CAMKK2Q96RR4 588 aa30.78■■■□□ 2.52
CDKN3-208ENST00000555837 PLEKHO1Q53GL0 409 aaPredicted RBP30.77■■■□□ 2.52
CDKN3-208ENST00000555837 NUDCQ9Y266 331 aa30.76■■■□□ 2.51
CDKN3-208ENST00000555837 DDX10Q13206 875 aaKnown RBP30.75■■■□□ 2.51
CDKN3-208ENST00000555837 NBPF14Q5TI25 921 aa30.75■■■□□ 2.51
CDKN3-208ENST00000555837 HSP90AB1P08238 724 aaKnown RBP30.74■■■□□ 2.51
CDKN3-208ENST00000555837 IFNL2Q8IZJ0 200 aa30.74■■■□□ 2.51
CDKN3-208ENST00000555837 ACSBG1Q96GR2 724 aa30.74■■■□□ 2.51
CDKN3-208ENST00000555837 NHSQ6T4R5 1651 aa30.74■■■□□ 2.51
CDKN3-208ENST00000555837 RGPD3A6NKT7 1758 aaPredicted RBP30.74■■■□□ 2.51
CDKN3-208ENST00000555837 RGPD4Q7Z3J3 1758 aa30.74■■■□□ 2.51
CDKN3-208ENST00000555837 EZH2Q15910 746 aaKnown RBP30.73■■■□□ 2.51
CDKN3-208ENST00000555837 SULT6B1Q6IMI4 303 aa30.73■■■□□ 2.51
CDKN3-208ENST00000555837 RALBP1Q15311 655 aa30.72■■■□□ 2.51
CDKN3-208ENST00000555837 SYTL4Q96C24 671 aaPredicted RBP30.72■■■□□ 2.51
CDKN3-208ENST00000555837 PKD1L3Q7Z443 1732 aa30.72■■■□□ 2.51
CDKN3-208ENST00000555837 KDRP35968 1356 aa30.71■■■□□ 2.51
CDKN3-208ENST00000555837 PPP2R1AP30153 589 aa30.71■■■□□ 2.51
CDKN3-208ENST00000555837 KAT6BQ8WYB5 2073 aa30.7■■■□□ 2.51
CDKN3-208ENST00000555837 NKX1-1Q15270 411 aaPredicted RBP30.69■■■□□ 2.5
CDKN3-208ENST00000555837 KCNQ2O43526 872 aa30.68■■■□□ 2.5
CDKN3-208ENST00000555837 SHANK3Q9BYB0 1731 aa30.67■■■□□ 2.5
CDKN3-208ENST00000555837 CYP27B1O15528 508 aa30.67■■■□□ 2.5
CDKN3-208ENST00000555837 PRIM1P49642 420 aaKnown RBP30.67■■■□□ 2.5
CDKN3-208ENST00000555837 C1orf141Q5JVX7 400 aa30.67■■■□□ 2.5
CDKN3-208ENST00000555837 U2SURPO15042 1029 aaKnown RBP30.65■■■□□ 2.5
CDKN3-208ENST00000555837 PHKG2P15735 406 aa30.64■■■□□ 2.5
CDKN3-208ENST00000555837 ZNF316A6NFI3 1004 aaPredicted RBP30.62■■■□□ 2.49
CDKN3-208ENST00000555837 ZNF530Q6P9A1 599 aaPredicted RBP30.62■■■□□ 2.49
CDKN3-208ENST00000555837 TXNRD1Q16881 649 aa30.61■■■□□ 2.49
CDKN3-208ENST00000555837 SLC27A3Q5K4L6 730 aa30.61■■■□□ 2.49
CDKN3-208ENST00000555837 AEBP1Q8IUX7 1158 aa30.61■■■□□ 2.49
CDKN3-208ENST00000555837 DCAF5Q96JK2 942 aa30.61■■■□□ 2.49
CDKN3-208ENST00000555837 PTF1AQ7RTS3 328 aa30.6■■■□□ 2.49
CDKN3-208ENST00000555837 DOT1LQ8TEK3 1739 aa30.6■■■□□ 2.49
CDKN3-208ENST00000555837 RREB1Q92766 1687 aa30.6■■■□□ 2.49
CDKN3-208ENST00000555837 SMARCC1Q92922 1105 aaPredicted RBP30.6■■■□□ 2.49
CDKN3-208ENST00000555837 COL3A1P02461 1466 aaPredicted RBP30.59■■■□□ 2.49
CDKN3-208ENST00000555837 BTAF1O14981 1849 aa30.59■■■□□ 2.49
CDKN3-208ENST00000555837 HMOX1P09601 288 aa30.58■■■□□ 2.49
CDKN3-208ENST00000555837 ERVV-2B6SEH9 535 aa30.57■■■□□ 2.48
CDKN3-208ENST00000555837 NEFMP07197 916 aa30.57■■■□□ 2.48
CDKN3-208ENST00000555837 TMOD3Q9NYL9 352 aa30.57■■■□□ 2.48
CDKN3-208ENST00000555837 MPRIPQ6WCQ1 1025 aa30.56■■■□□ 2.48
CDKN3-208ENST00000555837 PNNQ9H307 717 aaKnown RBP30.56■■■□□ 2.48
CDKN3-208ENST00000555837 AKAP4Q5JQC9 854 aa30.55■■■□□ 2.48
CDKN3-208ENST00000555837 U2AF1L5P0DN76 240 aaPredicted RBP30.53■■■□□ 2.48
CDKN3-208ENST00000555837 U2AF1Q01081 240 aaKnown RBP eCLIP30.53■■■□□ 2.48
CDKN3-208ENST00000555837 GAS2L2Q8NHY3 880 aa30.53■■■□□ 2.48
CDKN3-208ENST00000555837 STK32BQ9NY57 414 aa30.53■■■□□ 2.48
CDKN3-208ENST00000555837 MYBBP1AQ9BQG0 1328 aaKnown RBP30.52■■■□□ 2.48
CDKN3-208ENST00000555837 FCHSD2O94868 740 aa30.52■■■□□ 2.48
CDKN3-208ENST00000555837 NUP188Q5SRE5 1749 aa30.52■■■□□ 2.48
CDKN3-208ENST00000555837 R3HDM1Q15032 1099 aaKnown RBP30.5■■■□□ 2.47
CDKN3-208ENST00000555837 PROM2Q8N271 834 aa30.5■■■□□ 2.47
CDKN3-208ENST00000555837 CABP4P57796 275 aa30.48■■■□□ 2.47
CDKN3-208ENST00000555837 PIGBQ92521 554 aa30.46■■■□□ 2.47
CDKN3-208ENST00000555837 CCNL1Q9UK58 526 aaPredicted RBP30.46■■■□□ 2.47
CDKN3-208ENST00000555837 PALLDQ8WX93 1383 aa30.45■■■□□ 2.47
CDKN3-208ENST00000555837 PSDA5PKW4 1024 aaPredicted RBP30.45■■■□□ 2.47
CDKN3-208ENST00000555837 PRKAR2BP31323 418 aa30.44■■■□□ 2.46
CDKN3-208ENST00000555837 ITGB4P16144 1822 aa30.44■■■□□ 2.46
CDKN3-208ENST00000555837 SLC15A2Q16348 729 aa30.43■■■□□ 2.46
CDKN3-208ENST00000555837 MTHFSDQ2M296 383 aaKnown RBP30.43■■■□□ 2.46
CDKN3-208ENST00000555837 RSPH6AQ9H0K4 717 aa30.43■■■□□ 2.46
CDKN3-208ENST00000555837 PRKRIP1Q9H875 184 aaPredicted RBP30.43■■■□□ 2.46
CDKN3-208ENST00000555837 TOGARAM1Q9Y4F4 1720 aa30.42■■■□□ 2.46
CDKN3-208ENST00000555837 LY75O60449 1722 aa30.41■■■□□ 2.46
CDKN3-208ENST00000555837 GNAT3A8MTJ3 354 aa30.4■■■□□ 2.46
CDKN3-208ENST00000555837 KDM6AO15550 1401 aaPredicted RBP30.38■■■□□ 2.45
CDKN3-208ENST00000555837 LRRC4BQ9NT99 713 aa30.37■■■□□ 2.45
CDKN3-208ENST00000555837 MAP3K5Q99683 1374 aa30.37■■■□□ 2.45
CDKN3-208ENST00000555837 RNMTO43148 476 aaKnown RBP30.36■■■□□ 2.45
CDKN3-208ENST00000555837 RTF1Q92541 710 aaKnown RBP30.36■■■□□ 2.45
CDKN3-208ENST00000555837 NFATC2IPQ8NCF5 419 aa30.35■■■□□ 2.45
CDKN3-208ENST00000555837 SLC52A2Q9HAB3 445 aa30.35■■■□□ 2.45
CDKN3-208ENST00000555837 MAPK8IP3Q9UPT6 1336 aa30.35■■■□□ 2.45
CDKN3-208ENST00000555837 LOC102724428A0A0B4J2F2 783 aa30.34■■■□□ 2.45
CDKN3-208ENST00000555837 SIK1P57059 783 aa30.34■■■□□ 2.45
CDKN3-208ENST00000555837 WDR43Q15061 677 aaKnown RBP eCLIP30.34■■■□□ 2.45
CDKN3-208ENST00000555837 ANO8Q9HCE9 1232 aaPredicted RBP30.34■■■□□ 2.45
CDKN3-208ENST00000555837 ATG3Q9NT62 314 aa30.34■■■□□ 2.45
CDKN3-208ENST00000555837 SCN11AQ9UI33 1791 aa30.33■■■□□ 2.45
CDKN3-208ENST00000555837 ANP32CO43423 234 aa30.33■■■□□ 2.45
CDKN3-208ENST00000555837 HTATSF1O43719 755 aaKnown RBP30.33■■■□□ 2.45
CDKN3-208ENST00000555837 TEFQ10587 303 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms