RNA–Protein interactions for RNA: ENST00000555830.1

SDR39U1-215, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 418 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-215ENST00000555830 AMER1Q5JTC6 1135 aaPredicted RBP21.32■■□□□ 1
SDR39U1-215ENST00000555830 DOT1LQ8TEK3 1739 aa21.32■■□□□ 1
SDR39U1-215ENST00000555830 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
SDR39U1-215ENST00000555830 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
SDR39U1-215ENST00000555830 NUP188Q5SRE5 1749 aa21.3■■□□□ 1
SDR39U1-215ENST00000555830 SYTL4Q96C24 671 aaPredicted RBP21.3■■□□□ 1
SDR39U1-215ENST00000555830 CAMKK2Q96RR4 588 aa21.3■■□□□ 1
SDR39U1-215ENST00000555830 EIF4A2Q14240 407 aaKnown RBP21.29■■□□□ 1
SDR39U1-215ENST00000555830 BTAF1O14981 1849 aa21.29■■□□□ 1
SDR39U1-215ENST00000555830 PSDA5PKW4 1024 aaPredicted RBP21.28■■□□□ 1
SDR39U1-215ENST00000555830 EYA1Q99502 592 aa21.28■■□□□ 1
SDR39U1-215ENST00000555830 PCDH11XQ9BZA7 1347 aa21.28■■□□□ 1
SDR39U1-215ENST00000555830 PCDH11YQ9BZA8 1340 aa21.28■■□□□ 1
SDR39U1-215ENST00000555830 KCNQ2O43526 872 aa21.27■■□□□ 1
SDR39U1-215ENST00000555830 PTF1AQ7RTS3 328 aa21.27■■□□□ 1
SDR39U1-215ENST00000555830 PKD1L3Q7Z443 1732 aa21.26■□□□□ 0.99
SDR39U1-215ENST00000555830 NBPF14Q5TI25 921 aa21.26■□□□□ 0.99
SDR39U1-215ENST00000555830 PER1O15534 1290 aaPredicted RBP21.25■□□□□ 0.99
SDR39U1-215ENST00000555830 SPG7Q9UQ90 795 aa21.25■□□□□ 0.99
SDR39U1-215ENST00000555830 R3HDM1Q15032 1099 aaKnown RBP21.24■□□□□ 0.99
SDR39U1-215ENST00000555830 PLSCR1O15162 318 aa21.23■□□□□ 0.99
SDR39U1-215ENST00000555830 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
SDR39U1-215ENST00000555830 NCAPD2Q15021 1401 aa21.22■□□□□ 0.99
SDR39U1-215ENST00000555830 MTHFSP49914 203 aa21.22■□□□□ 0.99
SDR39U1-215ENST00000555830 IGSF1Q8N6C5 1336 aa21.21■□□□□ 0.99
SDR39U1-215ENST00000555830 PRIM1P49642 420 aaKnown RBP21.2■□□□□ 0.98
SDR39U1-215ENST00000555830 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
SDR39U1-215ENST00000555830 TXNRD1Q16881 649 aa21.18■□□□□ 0.98
SDR39U1-215ENST00000555830 CYP27B1O15528 508 aa21.16■□□□□ 0.98
SDR39U1-215ENST00000555830 SULT6B1Q6IMI4 303 aa21.16■□□□□ 0.98
SDR39U1-215ENST00000555830 ITGB4P16144 1822 aa21.15■□□□□ 0.98
SDR39U1-215ENST00000555830 DIAPH1O60610 1272 aaKnown RBP21.15■□□□□ 0.98
SDR39U1-215ENST00000555830 PLEKHO1Q53GL0 409 aaPredicted RBP21.15■□□□□ 0.98
SDR39U1-215ENST00000555830 CFAP53Q96M91 514 aa21.15■□□□□ 0.98
SDR39U1-215ENST00000555830 STK32BQ9NY57 414 aa21.15■□□□□ 0.98
SDR39U1-215ENST00000555830 TOGARAM1Q9Y4F4 1720 aa21.15■□□□□ 0.98
SDR39U1-215ENST00000555830 AEBP1Q8IUX7 1158 aa21.14■□□□□ 0.97
SDR39U1-215ENST00000555830 IFNL2Q8IZJ0 200 aa21.14■□□□□ 0.97
SDR39U1-215ENST00000555830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.14■□□□□ 0.97
SDR39U1-215ENST00000555830 IL13P35225 146 aa21.13■□□□□ 0.97
SDR39U1-215ENST00000555830 MPRIPQ6WCQ1 1025 aa21.13■□□□□ 0.97
SDR39U1-215ENST00000555830 U2SURPO15042 1029 aaKnown RBP21.12■□□□□ 0.97
SDR39U1-215ENST00000555830 ZNF530Q6P9A1 599 aaPredicted RBP21.12■□□□□ 0.97
SDR39U1-215ENST00000555830 PLEKHG2Q9H7P9 1386 aa21.11■□□□□ 0.97
SDR39U1-215ENST00000555830 HMOX1P09601 288 aa21.11■□□□□ 0.97
SDR39U1-215ENST00000555830 PHKG2P15735 406 aa21.11■□□□□ 0.97
SDR39U1-215ENST00000555830 AMOTQ4VCS5 1084 aa21.11■□□□□ 0.97
SDR39U1-215ENST00000555830 C1orf141Q5JVX7 400 aa21.11■□□□□ 0.97
SDR39U1-215ENST00000555830 ANO8Q9HCE9 1232 aaPredicted RBP21.11■□□□□ 0.97
SDR39U1-215ENST00000555830 LY75O60449 1722 aa21.1■□□□□ 0.97
SDR39U1-215ENST00000555830 PROM2Q8N271 834 aa21.1■□□□□ 0.97
SDR39U1-215ENST00000555830 LRP5O75197 1615 aa21.09■□□□□ 0.97
SDR39U1-215ENST00000555830 TMOD3Q9NYL9 352 aa21.09■□□□□ 0.97
SDR39U1-215ENST00000555830 HSP90AB1P08238 724 aaKnown RBP21.08■□□□□ 0.97
SDR39U1-215ENST00000555830 SLC27A3Q5K4L6 730 aa21.08■□□□□ 0.97
SDR39U1-215ENST00000555830 DDX10Q13206 875 aaKnown RBP21.07■□□□□ 0.96
SDR39U1-215ENST00000555830 CCNL1Q9UK58 526 aaPredicted RBP21.07■□□□□ 0.96
SDR39U1-215ENST00000555830 KDRP35968 1356 aa21.07■□□□□ 0.96
SDR39U1-215ENST00000555830 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
SDR39U1-215ENST00000555830 PPP2R1AP30153 589 aa21.06■□□□□ 0.96
SDR39U1-215ENST00000555830 NKX1-1Q15270 411 aaPredicted RBP21.06■□□□□ 0.96
SDR39U1-215ENST00000555830 PALLDQ8WX93 1383 aa21.06■□□□□ 0.96
SDR39U1-215ENST00000555830 PAPPAQ13219 1627 aa21.05■□□□□ 0.96
SDR39U1-215ENST00000555830 SLC15A2Q16348 729 aa21.05■□□□□ 0.96
SDR39U1-215ENST00000555830 SMARCC1Q92922 1105 aaPredicted RBP21.05■□□□□ 0.96
SDR39U1-215ENST00000555830 NUDCQ9Y266 331 aa21.05■□□□□ 0.96
SDR39U1-215ENST00000555830 KCNQ4P56696 695 aa21.04■□□□□ 0.96
SDR39U1-215ENST00000555830 DCAF5Q96JK2 942 aa21.03■□□□□ 0.96
SDR39U1-215ENST00000555830 LRRC4BQ9NT99 713 aa21.03■□□□□ 0.96
SDR39U1-215ENST00000555830 C5P01031 1676 aa21.02■□□□□ 0.96
SDR39U1-215ENST00000555830 PIGBQ92521 554 aa21.02■□□□□ 0.96
SDR39U1-215ENST00000555830 CASZ1Q86V15 1759 aa21.02■□□□□ 0.96
SDR39U1-215ENST00000555830 VIRMAQ69YN4 1812 aaKnown RBP21.01■□□□□ 0.95
SDR39U1-215ENST00000555830 CABP4P57796 275 aa21.01■□□□□ 0.95
SDR39U1-215ENST00000555830 SPON1Q9HCB6 807 aa21■□□□□ 0.95
SDR39U1-215ENST00000555830 PPP1R1BQ9UD71 204 aaPredicted RBP21■□□□□ 0.95
SDR39U1-215ENST00000555830 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
SDR39U1-215ENST00000555830 HMGB2P26583 209 aaKnown RBP20.99■□□□□ 0.95
SDR39U1-215ENST00000555830 ZNF827Q17R98 1081 aa20.99■□□□□ 0.95
SDR39U1-215ENST00000555830 TFCP2L1Q9NZI6 479 aa20.99■□□□□ 0.95
SDR39U1-215ENST00000555830 TAF1LQ8IZX4 1826 aa20.99■□□□□ 0.95
SDR39U1-215ENST00000555830 TUBGCP6Q96RT7 1819 aa20.99■□□□□ 0.95
SDR39U1-215ENST00000555830 KDM6AO15550 1401 aaPredicted RBP20.98■□□□□ 0.95
SDR39U1-215ENST00000555830 ERVV-2B6SEH9 535 aa20.98■□□□□ 0.95
SDR39U1-215ENST00000555830 U2AF1L5P0DN76 240 aaPredicted RBP20.98■□□□□ 0.95
SDR39U1-215ENST00000555830 U2AF1Q01081 240 aaKnown RBP eCLIP20.98■□□□□ 0.952e-8■■■■□ 22.5
SDR39U1-215ENST00000555830 AKAP4Q5JQC9 854 aa20.98■□□□□ 0.95
SDR39U1-215ENST00000555830 MSH5O43196 834 aa20.97■□□□□ 0.95
SDR39U1-215ENST00000555830 ZBTB7AO95365 584 aa20.97■□□□□ 0.95
SDR39U1-215ENST00000555830 QSER1Q2KHR3 1735 aa20.97■□□□□ 0.95
SDR39U1-215ENST00000555830 ASAP1Q9ULH1 1129 aa20.96■□□□□ 0.95
SDR39U1-215ENST00000555830 NEFMP07197 916 aa20.94■□□□□ 0.94
SDR39U1-215ENST00000555830 PRKAR2BP31323 418 aa20.94■□□□□ 0.94
SDR39U1-215ENST00000555830 RALBP1Q15311 655 aa20.94■□□□□ 0.94
SDR39U1-215ENST00000555830 MTHFSDQ2M296 383 aaKnown RBP20.94■□□□□ 0.94
SDR39U1-215ENST00000555830 GAS2L2Q8NHY3 880 aa20.94■□□□□ 0.94
SDR39U1-215ENST00000555830 AKT1S1Q96B36 256 aa20.94■□□□□ 0.94
SDR39U1-215ENST00000555830 AK7Q96M32 723 aa20.94■□□□□ 0.94
SDR39U1-215ENST00000555830 RBM42Q9BTD8 480 aaKnown RBP20.94■□□□□ 0.94
SDR39U1-215ENST00000555830 PDGFDQ9GZP0 370 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms