RNA–Protein interactions for RNA: ENST00000555808.1

TIMELESS-204, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-204ENST00000555808 ADCY9O60503 1353 aa10.9□□□□□ -0.67
TIMELESS-204ENST00000555808 ERBB3P21860 1342 aa10.89□□□□□ -0.67
TIMELESS-204ENST00000555808 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
TIMELESS-204ENST00000555808 NLRP2Q9NX02 1062 aa10.89□□□□□ -0.67
TIMELESS-204ENST00000555808 ZNF526Q8TF50 670 aaPredicted RBP10.88□□□□□ -0.67
TIMELESS-204ENST00000555808 TOGARAM1Q9Y4F4 1720 aa10.88□□□□□ -0.67
TIMELESS-204ENST00000555808 KTN1Q86UP2 1357 aaKnown RBP10.88□□□□□ -0.67
TIMELESS-204ENST00000555808 N4BP2Q86UW6 1770 aaPredicted RBP10.88□□□□□ -0.67
TIMELESS-204ENST00000555808 EVC2Q86UK5 1308 aa10.87□□□□□ -0.67
TIMELESS-204ENST00000555808 KIF13BQ9NQT8 1826 aa10.87□□□□□ -0.67
TIMELESS-204ENST00000555808 KCNQ4P56696 695 aa10.87□□□□□ -0.67
TIMELESS-204ENST00000555808 KIAA1551Q9HCM1 1747 aa10.86□□□□□ -0.67
TIMELESS-204ENST00000555808 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 CICQ96RK0 1608 aaPredicted RBP10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 C4BP0C0L5 1744 aa10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 DDX54Q8TDD1 881 aaKnown RBP10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 ANKRD24Q8TF21 1146 aa10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 SYTL4Q96C24 671 aaPredicted RBP10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 SIN3AQ96ST3 1273 aa10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 USP31Q70CQ4 1352 aa10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 ANKRD36BQ8N2N9 1353 aa10.85□□□□□ -0.67
TIMELESS-204ENST00000555808 PKD1L3Q7Z443 1732 aa10.84□□□□□ -0.67
TIMELESS-204ENST00000555808 MSL1Q68DK7 614 aa10.84□□□□□ -0.67
TIMELESS-204ENST00000555808 COL23A1Q86Y22 540 aaPredicted RBP10.84□□□□□ -0.67
TIMELESS-204ENST00000555808 NSD2O96028 1365 aa10.84□□□□□ -0.67
TIMELESS-204ENST00000555808 CCNL1Q9UK58 526 aaPredicted RBP10.83□□□□□ -0.68
TIMELESS-204ENST00000555808 CD2APQ9Y5K6 639 aa10.83□□□□□ -0.68
TIMELESS-204ENST00000555808 ARFGEF1Q9Y6D6 1849 aa10.82□□□□□ -0.68
TIMELESS-204ENST00000555808 PRIM1P49642 420 aaKnown RBP10.82□□□□□ -0.68
TIMELESS-204ENST00000555808 MAP2P11137 1827 aaKnown RBP10.81□□□□□ -0.68
TIMELESS-204ENST00000555808 KIF3CO14782 793 aa10.81□□□□□ -0.68
TIMELESS-204ENST00000555808 APLP1P51693 650 aa10.81□□□□□ -0.68
TIMELESS-204ENST00000555808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.81□□□□□ -0.68
TIMELESS-204ENST00000555808 CD163L1Q9NR16 1453 aa10.81□□□□□ -0.68
TIMELESS-204ENST00000555808 USP47Q96K76 1375 aa10.8□□□□□ -0.68
TIMELESS-204ENST00000555808 NME9Q86XW9 330 aa10.8□□□□□ -0.68
TIMELESS-204ENST00000555808 IGSF1Q8N6C5 1336 aa10.8□□□□□ -0.68
TIMELESS-204ENST00000555808 SBF1O95248 1867 aa10.79□□□□□ -0.68
TIMELESS-204ENST00000555808 C1QBPQ07021 282 aaKnown RBP10.79□□□□□ -0.68
TIMELESS-204ENST00000555808 TNRC6CQ9HCJ0 1690 aaKnown RBP10.79□□□□□ -0.68
TIMELESS-204ENST00000555808 MEGF6O75095 1541 aa10.79□□□□□ -0.68
TIMELESS-204ENST00000555808 SBNO2Q9Y2G9 1366 aa10.78□□□□□ -0.68
TIMELESS-204ENST00000555808 DNAJC5GQ8N7S2 189 aa10.78□□□□□ -0.68
TIMELESS-204ENST00000555808 FLAD1Q8NFF5 587 aa10.78□□□□□ -0.68
TIMELESS-204ENST00000555808 LTV1Q96GA3 475 aaPredicted RBP10.78□□□□□ -0.68
TIMELESS-204ENST00000555808 WWC3Q9ULE0 1092 aa10.78□□□□□ -0.68
TIMELESS-204ENST00000555808 CCDC88AQ3V6T2 1871 aa10.78□□□□□ -0.68
TIMELESS-204ENST00000555808 EDC4Q6P2E9 1401 aaKnown RBP10.77□□□□□ -0.68
TIMELESS-204ENST00000555808 ZCRB1Q8TBF4 217 aaKnown RBP10.77□□□□□ -0.69
TIMELESS-204ENST00000555808 IP6K1Q92551 441 aa10.77□□□□□ -0.69
TIMELESS-204ENST00000555808 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.69
TIMELESS-204ENST00000555808 TOMM70O94826 608 aa10.76□□□□□ -0.69
TIMELESS-204ENST00000555808 CAPN15O75808 1086 aa10.75□□□□□ -0.69
TIMELESS-204ENST00000555808 NEUROD1Q13562 356 aa10.75□□□□□ -0.69
TIMELESS-204ENST00000555808 L3MBTL2Q969R5 705 aa10.75□□□□□ -0.69
TIMELESS-204ENST00000555808 HMGB2P26583 209 aaKnown RBP10.74□□□□□ -0.69
TIMELESS-204ENST00000555808 HDGFL2Q7Z4V5 671 aaPredicted RBP10.74□□□□□ -0.69
TIMELESS-204ENST00000555808 C4AP0C0L4 1744 aa10.74□□□□□ -0.69
TIMELESS-204ENST00000555808 COL5A3P25940 1745 aaPredicted RBP10.74□□□□□ -0.69
TIMELESS-204ENST00000555808 ROCK2O75116 1388 aaKnown RBP10.74□□□□□ -0.69
TIMELESS-204ENST00000555808 NSD3Q9BZ95 1437 aa10.74□□□□□ -0.69
TIMELESS-204ENST00000555808 COL13A1Q5TAT6 717 aaPredicted RBP10.73□□□□□ -0.69
TIMELESS-204ENST00000555808 TMC1Q8TDI8 760 aa10.73□□□□□ -0.69
TIMELESS-204ENST00000555808 PALLDQ8WX93 1383 aa10.73□□□□□ -0.69
TIMELESS-204ENST00000555808 PCNTO95613 3336 aa10.73□□□□□ -0.69
TIMELESS-204ENST00000555808 HOXC9P31274 260 aa10.72□□□□□ -0.69
TIMELESS-204ENST00000555808 AK7Q96M32 723 aa10.72□□□□□ -0.69
TIMELESS-204ENST00000555808 CLSPNQ9HAW4 1339 aa10.72□□□□□ -0.69
TIMELESS-204ENST00000555808 A0A1W2PP64 1363 aa10.72□□□□□ -0.69
TIMELESS-204ENST00000555808 PXDNLA1KZ92 1463 aa10.72□□□□□ -0.69
TIMELESS-204ENST00000555808 PHF14O94880 888 aa10.71□□□□□ -0.69
TIMELESS-204ENST00000555808 ZNF831Q5JPB2 1677 aa10.71□□□□□ -0.69
TIMELESS-204ENST00000555808 KLRG1Q96E93 195 aa10.71□□□□□ -0.69
TIMELESS-204ENST00000555808 NMRK2Q9NPI5 230 aa10.71□□□□□ -0.69
TIMELESS-204ENST00000555808 CGNL1Q0VF96 1302 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 MAP3K19Q56UN5 1328 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 AMPHP49418 695 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 SMIM5Q71RC9 77 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 AMIGO3Q86WK7 504 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 TNS4Q8IZW8 715 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 JMYQ8N9B5 988 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 SLC12A5Q9H2X9 1139 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 TERF2IPQ9NYB0 399 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 TIAM2Q8IVF5 1701 aa10.7□□□□□ -0.7
TIMELESS-204ENST00000555808 RTL1A6NKG5 1358 aa10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 SSFA2P28290 1259 aa10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 PRELPP51888 382 aa10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 HTRA3P83110 453 aa10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 MPRIPQ6WCQ1 1025 aa10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 RBM46Q8TBY0 533 aaKnown RBP10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 RAPGEF4Q8WZA2 1011 aa10.69□□□□□ -0.7
TIMELESS-204ENST00000555808 SMG6Q86US8 1419 aaKnown RBP10.68□□□□□ -0.7
TIMELESS-204ENST00000555808 PCDH11XQ9BZA7 1347 aa10.68□□□□□ -0.7
TIMELESS-204ENST00000555808 PCDH11YQ9BZA8 1340 aa10.68□□□□□ -0.7
TIMELESS-204ENST00000555808 ANKRD26Q9UPS8 1709 aa10.68□□□□□ -0.7
TIMELESS-204ENST00000555808 TATP17735 454 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms