RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 ACSBG1Q96GR2 724 aa20.67■□□□□ 0.9
IFT43-211ENST00000555677 NSD2O96028 1365 aa20.67■□□□□ 0.9
IFT43-211ENST00000555677 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
IFT43-211ENST00000555677 BTAF1O14981 1849 aa20.65■□□□□ 0.9
IFT43-211ENST00000555677 R3HDM1Q15032 1099 aaKnown RBP20.65■□□□□ 0.9
IFT43-211ENST00000555677 PER1O15534 1290 aaPredicted RBP20.64■□□□□ 0.89
IFT43-211ENST00000555677 MORC1Q86VD1 984 aa20.64■□□□□ 0.89
IFT43-211ENST00000555677 PROM2Q8N271 834 aa20.64■□□□□ 0.89
IFT43-211ENST00000555677 RAPGEF4Q8WZA2 1011 aa20.64■□□□□ 0.89
IFT43-211ENST00000555677 AMER1Q5JTC6 1135 aaPredicted RBP20.63■□□□□ 0.89
IFT43-211ENST00000555677 SRCAPQ6ZRS2 3230 aa20.63■□□□□ 0.89
IFT43-211ENST00000555677 DOT1LQ8TEK3 1739 aa20.62■□□□□ 0.89
IFT43-211ENST00000555677 TATP17735 454 aaPredicted RBP20.62■□□□□ 0.89
IFT43-211ENST00000555677 EYA1Q99502 592 aa20.62■□□□□ 0.89
IFT43-211ENST00000555677 NBPF14Q5TI25 921 aa20.61■□□□□ 0.89
IFT43-211ENST00000555677 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
IFT43-211ENST00000555677 EIF4A2Q14240 407 aaKnown RBP20.6■□□□□ 0.89
IFT43-211ENST00000555677 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.89
IFT43-211ENST00000555677 TXNRD1Q16881 649 aa20.58■□□□□ 0.89
IFT43-211ENST00000555677 PRIM1P49642 420 aaKnown RBP20.57■□□□□ 0.88
IFT43-211ENST00000555677 SYTL4Q96C24 671 aaPredicted RBP20.55■□□□□ 0.88
IFT43-211ENST00000555677 LRP5O75197 1615 aa20.55■□□□□ 0.88
IFT43-211ENST00000555677 ITGB4P16144 1822 aa20.55■□□□□ 0.88
IFT43-211ENST00000555677 PCDH11XQ9BZA7 1347 aa20.54■□□□□ 0.88
IFT43-211ENST00000555677 PCDH11YQ9BZA8 1340 aa20.54■□□□□ 0.88
IFT43-211ENST00000555677 CYP27B1O15528 508 aa20.54■□□□□ 0.88
IFT43-211ENST00000555677 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
IFT43-211ENST00000555677 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
IFT43-211ENST00000555677 LY75O60449 1722 aa20.52■□□□□ 0.88
IFT43-211ENST00000555677 IGSF1Q8N6C5 1336 aa20.52■□□□□ 0.87
IFT43-211ENST00000555677 SPG7Q9UQ90 795 aa20.51■□□□□ 0.87
IFT43-211ENST00000555677 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
IFT43-211ENST00000555677 MTHFSP49914 203 aa20.5■□□□□ 0.87
IFT43-211ENST00000555677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.5■□□□□ 0.87
IFT43-211ENST00000555677 LRRC4BQ9NT99 713 aa20.49■□□□□ 0.87
IFT43-211ENST00000555677 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
IFT43-211ENST00000555677 IL13P35225 146 aa20.48■□□□□ 0.87
IFT43-211ENST00000555677 CNGB1Q14028 1251 aaPredicted RBP20.48■□□□□ 0.87
IFT43-211ENST00000555677 NKX1-1Q15270 411 aaPredicted RBP20.48■□□□□ 0.87
IFT43-211ENST00000555677 CASZ1Q86V15 1759 aa20.48■□□□□ 0.87
IFT43-211ENST00000555677 PAPPAQ13219 1627 aa20.47■□□□□ 0.87
IFT43-211ENST00000555677 SLC15A2Q16348 729 aa20.47■□□□□ 0.87
IFT43-211ENST00000555677 STK32BQ9NY57 414 aa20.46■□□□□ 0.87
IFT43-211ENST00000555677 MPRIPQ6WCQ1 1025 aa20.45■□□□□ 0.86
IFT43-211ENST00000555677 IFNL2Q8IZJ0 200 aa20.45■□□□□ 0.86
IFT43-211ENST00000555677 PDGFDQ9GZP0 370 aaPredicted RBP20.45■□□□□ 0.86
IFT43-211ENST00000555677 PHKG2P15735 406 aa20.44■□□□□ 0.86
IFT43-211ENST00000555677 KCNQ4P56696 695 aa20.44■□□□□ 0.86
IFT43-211ENST00000555677 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
IFT43-211ENST00000555677 AEBP1Q8IUX7 1158 aa20.44■□□□□ 0.86
IFT43-211ENST00000555677 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
IFT43-211ENST00000555677 PLEKHG2Q9H7P9 1386 aa20.43■□□□□ 0.86
IFT43-211ENST00000555677 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
IFT43-211ENST00000555677 PLEKHO1Q53GL0 409 aaPredicted RBP20.41■□□□□ 0.86
IFT43-211ENST00000555677 QSER1Q2KHR3 1735 aa20.41■□□□□ 0.86
IFT43-211ENST00000555677 TUBGCP6Q96RT7 1819 aa20.41■□□□□ 0.86
IFT43-211ENST00000555677 KDRP35968 1356 aa20.4■□□□□ 0.86
IFT43-211ENST00000555677 ZNF827Q17R98 1081 aa20.4■□□□□ 0.86
IFT43-211ENST00000555677 PIGBQ92521 554 aa20.4■□□□□ 0.86
IFT43-211ENST00000555677 SPON1Q9HCB6 807 aa20.4■□□□□ 0.86
IFT43-211ENST00000555677 DIAPH1O60610 1272 aaKnown RBP20.39■□□□□ 0.85
IFT43-211ENST00000555677 AMOTQ4VCS5 1084 aa20.39■□□□□ 0.85
IFT43-211ENST00000555677 AKT1S1Q96B36 256 aa20.39■□□□□ 0.85
IFT43-211ENST00000555677 CCNL1Q9UK58 526 aaPredicted RBP20.39■□□□□ 0.85
IFT43-211ENST00000555677 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.85
IFT43-211ENST00000555677 C5P01031 1676 aa20.38■□□□□ 0.85
IFT43-211ENST00000555677 ZBTB7AO95365 584 aa20.36■□□□□ 0.85
IFT43-211ENST00000555677 HMOX1P09601 288 aa20.36■□□□□ 0.85
IFT43-211ENST00000555677 ZNF530Q6P9A1 599 aaPredicted RBP20.36■□□□□ 0.85
IFT43-211ENST00000555677 TMOD3Q9NYL9 352 aa20.36■□□□□ 0.85
IFT43-211ENST00000555677 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
IFT43-211ENST00000555677 SMARCC1Q92922 1105 aaPredicted RBP20.35■□□□□ 0.85
IFT43-211ENST00000555677 DCAF5Q96JK2 942 aa20.35■□□□□ 0.85
IFT43-211ENST00000555677 COL3A1P02461 1466 aaPredicted RBP20.35■□□□□ 0.85
IFT43-211ENST00000555677 SCN11AQ9UI33 1791 aa20.34■□□□□ 0.85
IFT43-211ENST00000555677 HSP90AB1P08238 724 aaKnown RBP20.34■□□□□ 0.85
IFT43-211ENST00000555677 ATF5Q9Y2D1 282 aaPredicted RBP20.34■□□□□ 0.85
IFT43-211ENST00000555677 ERVV-2B6SEH9 535 aa20.33■□□□□ 0.85
IFT43-211ENST00000555677 C1orf141Q5JVX7 400 aa20.33■□□□□ 0.85
IFT43-211ENST00000555677 TFCP2L1Q9NZI6 479 aa20.33■□□□□ 0.85
IFT43-211ENST00000555677 ASAP1Q9ULH1 1129 aa20.33■□□□□ 0.85
IFT43-211ENST00000555677 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
IFT43-211ENST00000555677 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
IFT43-211ENST00000555677 ATG3Q9NT62 314 aa20.31■□□□□ 0.84
IFT43-211ENST00000555677 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
IFT43-211ENST00000555677 PTGER2P43116 358 aa20.3■□□□□ 0.84
IFT43-211ENST00000555677 MTFR1LQ9H019 292 aa20.3■□□□□ 0.84
IFT43-211ENST00000555677 PPP1R1BQ9UD71 204 aaPredicted RBP20.3■□□□□ 0.84
IFT43-211ENST00000555677 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
IFT43-211ENST00000555677 U2SURPO15042 1029 aaKnown RBP20.29■□□□□ 0.84
IFT43-211ENST00000555677 AKAP4Q5JQC9 854 aa20.29■□□□□ 0.84
IFT43-211ENST00000555677 COL24A1Q17RW2 1714 aa20.28■□□□□ 0.84
IFT43-211ENST00000555677 LOC102724428A0A0B4J2F2 783 aa20.28■□□□□ 0.84
IFT43-211ENST00000555677 HMGB2P26583 209 aaKnown RBP20.28■□□□□ 0.84
IFT43-211ENST00000555677 SIK1P57059 783 aa20.28■□□□□ 0.84
IFT43-211ENST00000555677 CABP4P57796 275 aa20.28■□□□□ 0.84
IFT43-211ENST00000555677 CFAP53Q96M91 514 aa20.28■□□□□ 0.84
IFT43-211ENST00000555677 UBR3Q6ZT12 1888 aa20.27■□□□□ 0.84
IFT43-211ENST00000555677 MTHFSDQ2M296 383 aaKnown RBP20.27■□□□□ 0.84
IFT43-211ENST00000555677 NFATC2IPQ8NCF5 419 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms