RNA–Protein interactions for RNA: ENST00000555587.5

RPGRIP1-209, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RPGRIP1, Length 2,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-209ENST00000555587 PLIN1O60240 522 aa10.75□□□□□ -0.69
RPGRIP1-209ENST00000555587 CENPQQ7L2Z9 268 aaPredicted RBP10.75□□□□□ -0.69
RPGRIP1-209ENST00000555587 CHMP4BQ9H444 224 aaKnown RBP10.75□□□□□ -0.69
RPGRIP1-209ENST00000555587 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
RPGRIP1-209ENST00000555587 SOS2Q07890 1332 aaPredicted RBP10.74□□□□□ -0.69
RPGRIP1-209ENST00000555587 TSR2Q969E8 191 aaKnown RBP10.74□□□□□ -0.69
RPGRIP1-209ENST00000555587 KDM2BQ8NHM5 1336 aa10.74□□□□□ -0.69
RPGRIP1-209ENST00000555587 RTF1Q92541 710 aaKnown RBP10.74□□□□□ -0.69
RPGRIP1-209ENST00000555587 AMOTQ4VCS5 1084 aa10.73□□□□□ -0.69
RPGRIP1-209ENST00000555587 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
RPGRIP1-209ENST00000555587 MBIPQ9NS73 344 aa10.73□□□□□ -0.69
RPGRIP1-209ENST00000555587 SMC4Q9NTJ3 1288 aa10.73□□□□□ -0.69
RPGRIP1-209ENST00000555587 CEMIPQ8WUJ3 1361 aa10.73□□□□□ -0.69
RPGRIP1-209ENST00000555587 C20orf194Q5TEA3 1177 aa10.73□□□□□ -0.69
RPGRIP1-209ENST00000555587 BRINP3Q76B58 766 aa10.73□□□□□ -0.69
RPGRIP1-209ENST00000555587 CHMP4AQ9BY43 222 aa10.73□□□□□ -0.69
RPGRIP1-209ENST00000555587 GNAT3A8MTJ3 354 aa10.72□□□□□ -0.69
RPGRIP1-209ENST00000555587 MTHFSDQ2M296 383 aaKnown RBP10.72□□□□□ -0.69
RPGRIP1-209ENST00000555587 NUTM2GQ5VZR2 741 aa10.72□□□□□ -0.69
RPGRIP1-209ENST00000555587 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
RPGRIP1-209ENST00000555587 SOX12O15370 315 aa10.72□□□□□ -0.69
RPGRIP1-209ENST00000555587 MYT1Q01538 1121 aa10.72□□□□□ -0.69
RPGRIP1-209ENST00000555587 ATF7IPQ6VMQ6 1270 aa10.72□□□□□ -0.69
RPGRIP1-209ENST00000555587 SCN11AQ9UI33 1791 aa10.71□□□□□ -0.69
RPGRIP1-209ENST00000555587 VAMP4O75379 141 aa10.71□□□□□ -0.69
RPGRIP1-209ENST00000555587 MVPQ14764 893 aaKnown RBP10.71□□□□□ -0.69
RPGRIP1-209ENST00000555587 DZIP1LQ8IYY4 767 aaKnown RBP10.71□□□□□ -0.69
RPGRIP1-209ENST00000555587 SSH1Q8WYL5 1049 aa10.71□□□□□ -0.69
RPGRIP1-209ENST00000555587 CLUAP1Q96AJ1 413 aa10.71□□□□□ -0.69
RPGRIP1-209ENST00000555587 ERBB3P21860 1342 aa10.71□□□□□ -0.7
RPGRIP1-209ENST00000555587 TCERG1O14776 1098 aaKnown RBP10.7□□□□□ -0.7
RPGRIP1-209ENST00000555587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPGRIP1-209ENST00000555587 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
RPGRIP1-209ENST00000555587 DDX19BQ9UMR2 479 aa10.7□□□□□ -0.7
RPGRIP1-209ENST00000555587 TWISTNBQ3B726 338 aaPredicted RBP10.7□□□□□ -0.7
RPGRIP1-209ENST00000555587 PLEKHO1Q53GL0 409 aaPredicted RBP10.7□□□□□ -0.7
RPGRIP1-209ENST00000555587 MRC1P22897 1456 aa10.7□□□□□ -0.7
RPGRIP1-209ENST00000555587 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 HOXB7P09629 217 aa10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 AKAP4Q5JQC9 854 aa10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 FTSJ3Q8IY81 847 aaKnown RBP10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 API5Q9BZZ5 524 aaKnown RBP10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 PLCH1Q4KWH8 1693 aa10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 ROBO1Q9Y6N7 1651 aa10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 COL14A1Q05707 1796 aaKnown RBP10.69□□□□□ -0.7
RPGRIP1-209ENST00000555587 NBPF6Q5VWK0 638 aa10.68□□□□□ -0.7
RPGRIP1-209ENST00000555587 NBPF4Q96M43 638 aa10.68□□□□□ -0.7
RPGRIP1-209ENST00000555587 ABCC4O15439 1325 aa10.68□□□□□ -0.7
RPGRIP1-209ENST00000555587 PTPRCP08575 1304 aa10.68□□□□□ -0.7
RPGRIP1-209ENST00000555587 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
RPGRIP1-209ENST00000555587 TRIM27P14373 513 aa10.68□□□□□ -0.7
RPGRIP1-209ENST00000555587 FRAT1Q92837 279 aaPredicted RBP10.68□□□□□ -0.7
RPGRIP1-209ENST00000555587 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
RPGRIP1-209ENST00000555587 FAM83GA6ND36 823 aa10.67□□□□□ -0.7
RPGRIP1-209ENST00000555587 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
RPGRIP1-209ENST00000555587 LAS1LQ9Y4W2 734 aaKnown RBP10.67□□□□□ -0.7
RPGRIP1-209ENST00000555587 MCM10Q7L590 875 aa10.66□□□□□ -0.7
RPGRIP1-209ENST00000555587 PANK1Q8TE04 598 aa10.66□□□□□ -0.7
RPGRIP1-209ENST00000555587 NOB1Q9ULX3 412 aaKnown RBP10.66□□□□□ -0.7
RPGRIP1-209ENST00000555587 TAF7Q15545 349 aaPredicted RBP10.66□□□□□ -0.7
RPGRIP1-209ENST00000555587 TSPYL4Q9UJ04 414 aa10.66□□□□□ -0.7
RPGRIP1-209ENST00000555587 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
RPGRIP1-209ENST00000555587 WNK3Q9BYP7 1800 aa10.66□□□□□ -0.7
RPGRIP1-209ENST00000555587 UBAP1LF5GYI3 381 aa10.65□□□□□ -0.7
RPGRIP1-209ENST00000555587 RLBP1P12271 317 aa10.65□□□□□ -0.7
RPGRIP1-209ENST00000555587 LMOD2Q6P5Q4 547 aa10.65□□□□□ -0.7
RPGRIP1-209ENST00000555587 C8orf58Q8NAV2 365 aa10.65□□□□□ -0.7
RPGRIP1-209ENST00000555587 COL5A2P05997 1499 aaPredicted RBP10.65□□□□□ -0.7
RPGRIP1-209ENST00000555587 DCTN1Q14203 1278 aa10.65□□□□□ -0.71
RPGRIP1-209ENST00000555587 LTV1Q96GA3 475 aaPredicted RBP10.65□□□□□ -0.71
RPGRIP1-209ENST00000555587 TOM1O60784 492 aa10.64□□□□□ -0.71
RPGRIP1-209ENST00000555587 HDAC1Q13547 482 aaPredicted RBP10.64□□□□□ -0.71
RPGRIP1-209ENST00000555587 C1orf141Q5JVX7 400 aa10.64□□□□□ -0.71
RPGRIP1-209ENST00000555587 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
RPGRIP1-209ENST00000555587 RWDD1Q9H446 243 aaPredicted RBP10.64□□□□□ -0.71
RPGRIP1-209ENST00000555587 LAMB4A4D0S4 1761 aa10.64□□□□□ -0.71
RPGRIP1-209ENST00000555587 IL17REQ8NFR9 667 aa10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 BCL2L13Q9BXK5 485 aa10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 RGS12O14924 1447 aa10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 SHANK3Q9BYB0 1731 aa10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 ZNF530Q6P9A1 599 aaPredicted RBP10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 SPG7Q9UQ90 795 aa10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 PAPPAQ13219 1627 aa10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 WDR17Q8IZU2 1322 aa10.63□□□□□ -0.71
RPGRIP1-209ENST00000555587 HSP90AB1P08238 724 aaKnown RBP10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 INTS3Q68E01 1043 aaKnown RBP10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 RAPGEF4Q8WZA2 1011 aa10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 DDX17Q92841 729 aaKnown RBP10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 AXIN2Q9Y2T1 843 aa10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 MEGF6O75095 1541 aa10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 IBTKQ9P2D0 1353 aaPredicted RBP10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 PHLPP1O60346 1717 aa10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 TATP17735 454 aaPredicted RBP10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 CCDC30Q5VVM6 783 aa10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 ZBTB40Q9NUA8 1239 aa10.62□□□□□ -0.71
RPGRIP1-209ENST00000555587 PIP4K2BP78356 416 aa10.61□□□□□ -0.71
RPGRIP1-209ENST00000555587 TMEM57Q8N5G2 664 aa10.61□□□□□ -0.71
RPGRIP1-209ENST00000555587 LRRC59Q96AG4 307 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms