RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 GIGYF2Q6Y7W6 1299 aaKnown RBP7.83□□□□□ -1.16
ATXN3-232ENST00000555381 SNIP1Q8TAD8 396 aaKnown RBP7.83□□□□□ -1.16
ATXN3-232ENST00000555381 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-232ENST00000555381 CASKIN1Q8WXD9 1431 aa7.83□□□□□ -1.16
ATXN3-232ENST00000555381 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-232ENST00000555381 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
ATXN3-232ENST00000555381 WASHC2CQ9Y4E1 1318 aa7.82□□□□□ -1.16
ATXN3-232ENST00000555381 CCDC18Q5T9S5 1454 aa7.82□□□□□ -1.16
ATXN3-232ENST00000555381 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
ATXN3-232ENST00000555381 KIDINS220Q9ULH0 1771 aa7.82□□□□□ -1.16
ATXN3-232ENST00000555381 KIF3BO15066 747 aa7.82□□□□□ -1.16
ATXN3-232ENST00000555381 PRKCSHP14314 528 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-232ENST00000555381 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
ATXN3-232ENST00000555381 MRGPRX2Q96LB1 330 aa7.82□□□□□ -1.16
ATXN3-232ENST00000555381 TRIM47Q96LD4 638 aa7.82□□□□□ -1.16
ATXN3-232ENST00000555381 DHX29Q7Z478 1369 aaKnown RBP7.82□□□□□ -1.16
ATXN3-232ENST00000555381 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-232ENST00000555381 J3QL48 77 aa7.81□□□□□ -1.16
ATXN3-232ENST00000555381 MS4A1P11836 297 aa7.81□□□□□ -1.16
ATXN3-232ENST00000555381 MMP16P51512 607 aa7.81□□□□□ -1.16
ATXN3-232ENST00000555381 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
ATXN3-232ENST00000555381 CCNB3Q8WWL7 1395 aa7.81□□□□□ -1.16
ATXN3-232ENST00000555381 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-232ENST00000555381 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
ATXN3-232ENST00000555381 USB1Q9BQ65 265 aaKnown RBP7.8□□□□□ -1.16
ATXN3-232ENST00000555381 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
ATXN3-232ENST00000555381 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-232ENST00000555381 RTEL1-TNFRSF6BF6WH68 1400 aa7.79□□□□□ -1.16
ATXN3-232ENST00000555381 KDM4AO75164 1064 aa7.79□□□□□ -1.16
ATXN3-232ENST00000555381 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-232ENST00000555381 CCDC24Q8N4L8 307 aa7.79□□□□□ -1.16
ATXN3-232ENST00000555381 ATP7AQ04656 1500 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 DXOO77932 396 aaKnown RBP7.78□□□□□ -1.16
ATXN3-232ENST00000555381 GMPRP36959 345 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 POTEAQ6S8J7 498 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 HPS1Q92902 700 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 MED14O60244 1454 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 ITSN2Q9NZM3 1697 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
ATXN3-232ENST00000555381 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 SYCP2Q9BX26 1530 aa7.78□□□□□ -1.16
ATXN3-232ENST00000555381 PLXNC1O60486 1568 aa7.77□□□□□ -1.17
ATXN3-232ENST00000555381 HLA-CQ95604 372 aa7.77□□□□□ -1.17
ATXN3-232ENST00000555381 GPBP1L1Q9HC44 474 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-232ENST00000555381 SENP2Q9HC62 589 aa7.77□□□□□ -1.17
ATXN3-232ENST00000555381 FAM135AQ9P2D6 1515 aa7.77□□□□□ -1.17
ATXN3-232ENST00000555381 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-232ENST00000555381 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
ATXN3-232ENST00000555381 PZPP20742 1482 aa7.76□□□□□ -1.17
ATXN3-232ENST00000555381 NLRP1Q9C000 1473 aa7.76□□□□□ -1.17
ATXN3-232ENST00000555381 TSPY4P0CV99 314 aa7.76□□□□□ -1.17
ATXN3-232ENST00000555381 TSPY10P0CW01 314 aa7.76□□□□□ -1.17
ATXN3-232ENST00000555381 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
ATXN3-232ENST00000555381 BEGAINQ9BUH8 593 aa7.76□□□□□ -1.17
ATXN3-232ENST00000555381 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
ATXN3-232ENST00000555381 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
ATXN3-232ENST00000555381 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
ATXN3-232ENST00000555381 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
ATXN3-232ENST00000555381 MTUS2Q5JR59 1369 aa7.75□□□□□ -1.17
ATXN3-232ENST00000555381 VEGFBP49765 207 aa7.75□□□□□ -1.17
ATXN3-232ENST00000555381 RC3H1Q5TC82 1133 aaKnown RBP7.75□□□□□ -1.17
ATXN3-232ENST00000555381 ZSCAN1Q8NBB4 408 aa7.75□□□□□ -1.17
ATXN3-232ENST00000555381 FAM135BQ49AJ0 1406 aa7.75□□□□□ -1.17
ATXN3-232ENST00000555381 NEURL4Q96JN8 1562 aa7.75□□□□□ -1.17
ATXN3-232ENST00000555381 USP46P62068 366 aa7.74□□□□□ -1.17
ATXN3-232ENST00000555381 SKOR1P84550 965 aa7.74□□□□□ -1.17
ATXN3-232ENST00000555381 SPIRE2Q8WWL2 714 aa7.74□□□□□ -1.17
ATXN3-232ENST00000555381 KDM4CQ9H3R0 1056 aa7.74□□□□□ -1.17
ATXN3-232ENST00000555381 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
ATXN3-232ENST00000555381 UGGT1Q9NYU2 1555 aa7.73□□□□□ -1.17
ATXN3-232ENST00000555381 HOXA2O43364 376 aa7.73□□□□□ -1.17
ATXN3-232ENST00000555381 LTKP29376 864 aa7.73□□□□□ -1.17
ATXN3-232ENST00000555381 SLC16A10Q8TF71 515 aa7.73□□□□□ -1.17
ATXN3-232ENST00000555381 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
ATXN3-232ENST00000555381 FYCO1Q9BQS8 1478 aa7.73□□□□□ -1.17
ATXN3-232ENST00000555381 INO80Q9ULG1 1556 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-232ENST00000555381 ALDH1A1P00352 501 aa7.72□□□□□ -1.17
ATXN3-232ENST00000555381 WNT7BP56706 349 aa7.72□□□□□ -1.17
ATXN3-232ENST00000555381 GUCA2AQ02747 115 aa7.72□□□□□ -1.17
ATXN3-232ENST00000555381 NUTM1Q86Y26 1132 aa7.72□□□□□ -1.17
ATXN3-232ENST00000555381 KIFC2Q96AC6 838 aa7.72□□□□□ -1.17
ATXN3-232ENST00000555381 CDC42BPAQ5VT25 1732 aa7.72□□□□□ -1.17
ATXN3-232ENST00000555381 JUNDP17535 347 aa7.71□□□□□ -1.18
ATXN3-232ENST00000555381 KCNA6P17658 529 aa7.71□□□□□ -1.18
ATXN3-232ENST00000555381 BRPF1P55201 1214 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-232ENST00000555381 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-232ENST00000555381 TBC1D2Q9BYX2 928 aa7.71□□□□□ -1.18
ATXN3-232ENST00000555381 NXF1Q9UBU9 619 aaKnown RBP7.71□□□□□ -1.18
ATXN3-232ENST00000555381 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
ATXN3-232ENST00000555381 MOXD2PA6NHM9 499 aa7.7□□□□□ -1.18
ATXN3-232ENST00000555381 NDUFV2P19404 249 aa7.7□□□□□ -1.18
ATXN3-232ENST00000555381 SYMPKQ92797 1274 aaKnown RBP7.7□□□□□ -1.18
ATXN3-232ENST00000555381 FAM117AQ9C073 453 aa7.7□□□□□ -1.18
ATXN3-232ENST00000555381 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
ATXN3-232ENST00000555381 PCDHGC3Q9UN70 934 aa7.69□□□□□ -1.18
ATXN3-232ENST00000555381 TMEM94Q12767 1356 aa7.69□□□□□ -1.18
ATXN3-232ENST00000555381 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
ATXN3-232ENST00000555381 CCDC141Q6ZP82 1450 aa7.68□□□□□ -1.18
ATXN3-232ENST00000555381 ADGBQ8N7X0 1667 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms