RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 MEGF6O75095 1541 aa19.01■□□□□ 0.63
CHD8-208ENST00000555301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHD8-208ENST00000555301 RGS12O14924 1447 aa19■□□□□ 0.63
CHD8-208ENST00000555301 AMOTQ4VCS5 1084 aa19■□□□□ 0.63
CHD8-208ENST00000555301 ZCRB1Q8TBF4 217 aaKnown RBP19■□□□□ 0.63
CHD8-208ENST00000555301 PNISRQ8TF01 805 aaKnown RBP19■□□□□ 0.63
CHD8-208ENST00000555301 RSPH6AQ9H0K4 717 aa19■□□□□ 0.63
CHD8-208ENST00000555301 THSD7AQ9UPZ6 1657 aa18.99■□□□□ 0.63
CHD8-208ENST00000555301 PRKAR2BP31323 418 aa18.99■□□□□ 0.63
CHD8-208ENST00000555301 PDE3BQ13370 1112 aa18.99■□□□□ 0.63
CHD8-208ENST00000555301 PLEKHO1Q53GL0 409 aaPredicted RBP18.99■□□□□ 0.63
CHD8-208ENST00000555301 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
CHD8-208ENST00000555301 NEFMP07197 916 aa18.98■□□□□ 0.63
CHD8-208ENST00000555301 ADAMTS8Q9UP79 889 aa18.98■□□□□ 0.63
CHD8-208ENST00000555301 RGPD2P0DJD1 1756 aa18.98■□□□□ 0.63
CHD8-208ENST00000555301 TNS2Q63HR2 1409 aa18.98■□□□□ 0.63
CHD8-208ENST00000555301 KRT27Q7Z3Y8 459 aa18.96■□□□□ 0.63
CHD8-208ENST00000555301 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
CHD8-208ENST00000555301 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
CHD8-208ENST00000555301 PARP4Q9UKK3 1724 aaKnown RBP18.95■□□□□ 0.62
CHD8-208ENST00000555301 DDX54Q8TDD1 881 aaKnown RBP18.94■□□□□ 0.62
CHD8-208ENST00000555301 PLEKHF1Q96S99 279 aa18.94■□□□□ 0.62
CHD8-208ENST00000555301 MAPK8IP3Q9UPT6 1336 aa18.94■□□□□ 0.62
CHD8-208ENST00000555301 WNK3Q9BYP7 1800 aa18.93■□□□□ 0.62
CHD8-208ENST00000555301 IFNL2Q8IZJ0 200 aa18.93■□□□□ 0.62
CHD8-208ENST00000555301 GAS2L2Q8NHY3 880 aa18.93■□□□□ 0.62
CHD8-208ENST00000555301 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
CHD8-208ENST00000555301 MTHFSDQ2M296 383 aaKnown RBP18.92■□□□□ 0.62
CHD8-208ENST00000555301 ZNF530Q6P9A1 599 aaPredicted RBP18.92■□□□□ 0.62
CHD8-208ENST00000555301 FAM9BQ8IZU0 186 aa18.92■□□□□ 0.62
CHD8-208ENST00000555301 MARCH10Q8NA82 808 aaPredicted RBP18.92■□□□□ 0.62
CHD8-208ENST00000555301 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
CHD8-208ENST00000555301 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
CHD8-208ENST00000555301 C1orf141Q5JVX7 400 aa18.91■□□□□ 0.62
CHD8-208ENST00000555301 CYP27B1O15528 508 aa18.9■□□□□ 0.62
CHD8-208ENST00000555301 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
CHD8-208ENST00000555301 PHKG2P15735 406 aa18.9■□□□□ 0.62
CHD8-208ENST00000555301 AKAP4Q5JQC9 854 aa18.9■□□□□ 0.62
CHD8-208ENST00000555301 CCDC146Q8IYE0 955 aa18.89■□□□□ 0.61
CHD8-208ENST00000555301 PKD1L3Q7Z443 1732 aa18.88■□□□□ 0.61
CHD8-208ENST00000555301 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
CHD8-208ENST00000555301 FAM196AQ6ZSG2 479 aa18.88■□□□□ 0.61
CHD8-208ENST00000555301 BCL9O00512 1426 aa18.88■□□□□ 0.61
CHD8-208ENST00000555301 NFE2L2Q16236 605 aa18.86■□□□□ 0.61
CHD8-208ENST00000555301 GNAT3A8MTJ3 354 aa18.85■□□□□ 0.61
CHD8-208ENST00000555301 FAM182BQ5T319 152 aa18.85■□□□□ 0.61
CHD8-208ENST00000555301 DCAF5Q96JK2 942 aa18.85■□□□□ 0.61
CHD8-208ENST00000555301 MAP3K5Q99683 1374 aa18.84■□□□□ 0.61
CHD8-208ENST00000555301 HTATSF1O43719 755 aaKnown RBP18.84■□□□□ 0.61
CHD8-208ENST00000555301 TMPOP42166 694 aaKnown RBP18.83■□□□□ 0.6
CHD8-208ENST00000555301 RTF1Q92541 710 aaKnown RBP18.83■□□□□ 0.6
CHD8-208ENST00000555301 APAF1O14727 1248 aa18.82■□□□□ 0.6
CHD8-208ENST00000555301 RIPK4P57078 832 aa18.82■□□□□ 0.6
CHD8-208ENST00000555301 LMOD3Q0VAK6 560 aa18.82■□□□□ 0.6
CHD8-208ENST00000555301 MPRIPQ6WCQ1 1025 aa18.82■□□□□ 0.6
CHD8-208ENST00000555301 ILDR2Q71H61 639 aa18.82■□□□□ 0.6
CHD8-208ENST00000555301 SHANK3Q9BYB0 1731 aa18.81■□□□□ 0.6
CHD8-208ENST00000555301 BRWD3Q6RI45 1802 aa18.81■□□□□ 0.6
CHD8-208ENST00000555301 ERVV-2B6SEH9 535 aa18.8■□□□□ 0.6
CHD8-208ENST00000555301 RNMTO43148 476 aaKnown RBP18.79■□□□□ 0.6
CHD8-208ENST00000555301 NEUROD2Q15784 382 aa18.79■□□□□ 0.6
CHD8-208ENST00000555301 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
CHD8-208ENST00000555301 ACSBG1Q96GR2 724 aa18.79■□□□□ 0.6
CHD8-208ENST00000555301 RRP7AQ9Y3A4 280 aaKnown RBP18.79■□□□□ 0.6
CHD8-208ENST00000555301 KDM6AO15550 1401 aaPredicted RBP18.78■□□□□ 0.6
CHD8-208ENST00000555301 PRIM1P49642 420 aaKnown RBP18.78■□□□□ 0.6
CHD8-208ENST00000555301 NGEFQ8N5V2 710 aa18.78■□□□□ 0.6
CHD8-208ENST00000555301 SYTL4Q96C24 671 aaPredicted RBP18.78■□□□□ 0.6
CHD8-208ENST00000555301 LGR6Q9HBX8 967 aa18.78■□□□□ 0.6
CHD8-208ENST00000555301 CABP4P57796 275 aa18.77■□□□□ 0.6
CHD8-208ENST00000555301 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
CHD8-208ENST00000555301 BCL11BQ9C0K0 894 aaPredicted RBP18.77■□□□□ 0.6
CHD8-208ENST00000555301 TRIM37O94972 964 aa18.76■□□□□ 0.59
CHD8-208ENST00000555301 TEFQ10587 303 aa18.76■□□□□ 0.59
CHD8-208ENST00000555301 MCM10Q7L590 875 aa18.76■□□□□ 0.59
CHD8-208ENST00000555301 TMOD3Q9NYL9 352 aa18.76■□□□□ 0.59
CHD8-208ENST00000555301 CEMIPQ8WUJ3 1361 aa18.76■□□□□ 0.59
CHD8-208ENST00000555301 KCNQ2O43526 872 aa18.75■□□□□ 0.59
CHD8-208ENST00000555301 CCDC27Q2M243 656 aa18.75■□□□□ 0.59
CHD8-208ENST00000555301 CCDC125Q86Z20 511 aa18.75■□□□□ 0.59
CHD8-208ENST00000555301 SLC52A2Q9HAB3 445 aa18.75■□□□□ 0.59
CHD8-208ENST00000555301 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
CHD8-208ENST00000555301 TRIM35Q9UPQ4 493 aa18.74■□□□□ 0.59
CHD8-208ENST00000555301 SF3B2Q13435 895 aaKnown RBP18.73■□□□□ 0.59
CHD8-208ENST00000555301 NFATC2IPQ8NCF5 419 aa18.73■□□□□ 0.59
CHD8-208ENST00000555301 PIGBQ92521 554 aa18.72■□□□□ 0.59
CHD8-208ENST00000555301 MRC1P22897 1456 aa18.71■□□□□ 0.59
CHD8-208ENST00000555301 ADAMTS7Q9UKP4 1686 aa18.71■□□□□ 0.59
CHD8-208ENST00000555301 CALD1Q05682 793 aaKnown RBP18.71■□□□□ 0.59
CHD8-208ENST00000555301 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
CHD8-208ENST00000555301 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
CHD8-208ENST00000555301 NHSQ6T4R5 1651 aa18.69■□□□□ 0.58
CHD8-208ENST00000555301 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
CHD8-208ENST00000555301 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
CHD8-208ENST00000555301 APBA3O96018 575 aa18.69■□□□□ 0.58
CHD8-208ENST00000555301 TAF7Q15545 349 aaPredicted RBP18.69■□□□□ 0.58
CHD8-208ENST00000555301 WWC1Q8IX03 1113 aa18.69■□□□□ 0.58
CHD8-208ENST00000555301 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.58
CHD8-208ENST00000555301 SMARCC1Q92922 1105 aaPredicted RBP18.69■□□□□ 0.58
CHD8-208ENST00000555301 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms