RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 U2AF1Q01081 240 aaKnown RBP eCLIP16.1■□□□□ 0.17
ACTN1-214ENST00000555075 PRKRIP1Q9H875 184 aaPredicted RBP16.1■□□□□ 0.17
ACTN1-214ENST00000555075 HMOX1P09601 288 aa16.09■□□□□ 0.17
ACTN1-214ENST00000555075 PLEKHO1Q53GL0 409 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-214ENST00000555075 IGSF1Q8N6C5 1336 aa16.09■□□□□ 0.17
ACTN1-214ENST00000555075 OVOS2A0A0G2JMS6 1433 aa16.09■□□□□ 0.17
ACTN1-214ENST00000555075 DISP2A7MBM2 1401 aa16.09■□□□□ 0.17
ACTN1-214ENST00000555075 PCDH11XQ9BZA7 1347 aa16.08■□□□□ 0.16
ACTN1-214ENST00000555075 PCDH11YQ9BZA8 1340 aa16.08■□□□□ 0.16
ACTN1-214ENST00000555075 TNS2Q63HR2 1409 aa16.08■□□□□ 0.16
ACTN1-214ENST00000555075 TNS1Q9HBL0 1735 aaKnown RBP16.08■□□□□ 0.16
ACTN1-214ENST00000555075 WDR43Q15061 677 aaKnown RBP eCLIP16.07■□□□□ 0.16
ACTN1-214ENST00000555075 AMOTQ4VCS5 1084 aa16.07■□□□□ 0.16
ACTN1-214ENST00000555075 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
ACTN1-214ENST00000555075 PARP4Q9UKK3 1724 aaKnown RBP16.06■□□□□ 0.16
ACTN1-214ENST00000555075 MARCH10Q8NA82 808 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-214ENST00000555075 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
ACTN1-214ENST00000555075 RGPD2P0DJD1 1756 aa16.05■□□□□ 0.16
ACTN1-214ENST00000555075 LRRC37A3O60309 1634 aa16.05■□□□□ 0.16
ACTN1-214ENST00000555075 MEGF6O75095 1541 aa16.05■□□□□ 0.16
ACTN1-214ENST00000555075 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
ACTN1-214ENST00000555075 SYTL4Q96C24 671 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-214ENST00000555075 WNK3Q9BYP7 1800 aa16.04■□□□□ 0.16
ACTN1-214ENST00000555075 TRIM37O94972 964 aa16.04■□□□□ 0.16
ACTN1-214ENST00000555075 EN1Q05925 392 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-214ENST00000555075 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-214ENST00000555075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.16
ACTN1-214ENST00000555075 HSP90AB1P08238 724 aaKnown RBP16.03■□□□□ 0.16
ACTN1-214ENST00000555075 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
ACTN1-214ENST00000555075 ACSBG1Q96GR2 724 aa16.03■□□□□ 0.16
ACTN1-214ENST00000555075 SRCAPQ6ZRS2 3230 aa16.02■□□□□ 0.16
ACTN1-214ENST00000555075 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
ACTN1-214ENST00000555075 APBA3O96018 575 aa16.01■□□□□ 0.15
ACTN1-214ENST00000555075 PRKAR2BP31323 418 aa16.01■□□□□ 0.15
ACTN1-214ENST00000555075 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
ACTN1-214ENST00000555075 PSDA5PKW4 1024 aaPredicted RBP16■□□□□ 0.15
ACTN1-214ENST00000555075 FCHSD2O94868 740 aa16■□□□□ 0.15
ACTN1-214ENST00000555075 NCAPD2Q15021 1401 aa16■□□□□ 0.15
ACTN1-214ENST00000555075 EZH2Q15910 746 aaKnown RBP15.99■□□□□ 0.15
ACTN1-214ENST00000555075 GAS2L2Q8NHY3 880 aa15.99■□□□□ 0.15
ACTN1-214ENST00000555075 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-214ENST00000555075 MRS2Q9HD23 443 aa15.99■□□□□ 0.15
ACTN1-214ENST00000555075 KDRP35968 1356 aa15.99■□□□□ 0.15
ACTN1-214ENST00000555075 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
ACTN1-214ENST00000555075 PHKG2P15735 406 aa15.98■□□□□ 0.15
ACTN1-214ENST00000555075 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
ACTN1-214ENST00000555075 CYP27B1O15528 508 aa15.97■□□□□ 0.15
ACTN1-214ENST00000555075 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
ACTN1-214ENST00000555075 AKAP4Q5JQC9 854 aa15.96■□□□□ 0.15
ACTN1-214ENST00000555075 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
ACTN1-214ENST00000555075 RTF1Q92541 710 aaKnown RBP15.96■□□□□ 0.15
ACTN1-214ENST00000555075 DCAF5Q96JK2 942 aa15.96■□□□□ 0.15
ACTN1-214ENST00000555075 CABP4P57796 275 aa15.95■□□□□ 0.14
ACTN1-214ENST00000555075 CAMKK2Q96RR4 588 aa15.95■□□□□ 0.14
ACTN1-214ENST00000555075 RSPH6AQ9H0K4 717 aa15.95■□□□□ 0.14
ACTN1-214ENST00000555075 TMOD3Q9NYL9 352 aa15.95■□□□□ 0.14
ACTN1-214ENST00000555075 RREB1Q92766 1687 aa15.95■□□□□ 0.14
ACTN1-214ENST00000555075 KCNQ2O43526 872 aa15.94■□□□□ 0.14
ACTN1-214ENST00000555075 R3HDM1Q15032 1099 aaKnown RBP15.94■□□□□ 0.14
ACTN1-214ENST00000555075 MTHFSDQ2M296 383 aaKnown RBP15.94■□□□□ 0.14
ACTN1-214ENST00000555075 LRP5O75197 1615 aa15.94■□□□□ 0.14
ACTN1-214ENST00000555075 BCL9O00512 1426 aa15.94■□□□□ 0.14
ACTN1-214ENST00000555075 GNAT3A8MTJ3 354 aa15.93■□□□□ 0.14
ACTN1-214ENST00000555075 NUP188Q5SRE5 1749 aa15.92■□□□□ 0.14
ACTN1-214ENST00000555075 PKD1L3Q7Z443 1732 aa15.92■□□□□ 0.14
ACTN1-214ENST00000555075 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-214ENST00000555075 ERVV-2B6SEH9 535 aa15.91■□□□□ 0.14
ACTN1-214ENST00000555075 TEFQ10587 303 aa15.91■□□□□ 0.14
ACTN1-214ENST00000555075 PHACTR3Q96KR7 559 aa15.91■□□□□ 0.14
ACTN1-214ENST00000555075 MAP3K5Q99683 1374 aa15.9■□□□□ 0.14
ACTN1-214ENST00000555075 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
ACTN1-214ENST00000555075 SMARCC1Q92922 1105 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-214ENST00000555075 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
ACTN1-214ENST00000555075 SBF2Q86WG5 1849 aa15.89■□□□□ 0.13
ACTN1-214ENST00000555075 HMGB2P26583 209 aaKnown RBP15.89■□□□□ 0.13
ACTN1-214ENST00000555075 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
ACTN1-214ENST00000555075 ADAMTS8Q9UP79 889 aa15.89■□□□□ 0.13
ACTN1-214ENST00000555075 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.13
ACTN1-214ENST00000555075 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
ACTN1-214ENST00000555075 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
ACTN1-214ENST00000555075 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
ACTN1-214ENST00000555075 FAM9BQ8IZU0 186 aa15.88■□□□□ 0.13
ACTN1-214ENST00000555075 PLSCR1O15162 318 aa15.87■□□□□ 0.13
ACTN1-214ENST00000555075 NFE2L2Q16236 605 aa15.87■□□□□ 0.13
ACTN1-214ENST00000555075 PTF1AQ7RTS3 328 aa15.87■□□□□ 0.13
ACTN1-214ENST00000555075 DOT1LQ8TEK3 1739 aa15.87■□□□□ 0.13
ACTN1-214ENST00000555075 RGPD3A6NKT7 1758 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-214ENST00000555075 RGPD4Q7Z3J3 1758 aa15.87■□□□□ 0.13
ACTN1-214ENST00000555075 NHSQ6T4R5 1651 aa15.86■□□□□ 0.13
ACTN1-214ENST00000555075 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
ACTN1-214ENST00000555075 RIPK4P57078 832 aa15.86■□□□□ 0.13
ACTN1-214ENST00000555075 TTC5Q8N0Z6 440 aa15.86■□□□□ 0.13
ACTN1-214ENST00000555075 NFATC2IPQ8NCF5 419 aa15.86■□□□□ 0.13
ACTN1-214ENST00000555075 PIGBQ92521 554 aa15.86■□□□□ 0.13
ACTN1-214ENST00000555075 HTATSF1O43719 755 aaKnown RBP15.85■□□□□ 0.13
ACTN1-214ENST00000555075 CCDC184Q52MB2 194 aa15.85■□□□□ 0.13
ACTN1-214ENST00000555075 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
ACTN1-214ENST00000555075 LGR6Q9HBX8 967 aa15.85■□□□□ 0.13
ACTN1-214ENST00000555075 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-214ENST00000555075 TXNRD1Q16881 649 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms