RNA–Protein interactions for RNA: ENST00000554543.1

ITGA7-210, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 707 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-210ENST00000554543 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
ITGA7-210ENST00000554543 EYA1Q99502 592 aa17.09■□□□□ 0.33
ITGA7-210ENST00000554543 NSD2O96028 1365 aa17.09■□□□□ 0.33
ITGA7-210ENST00000554543 TOGARAM1Q9Y4F4 1720 aa17.09■□□□□ 0.33
ITGA7-210ENST00000554543 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.32
ITGA7-210ENST00000554543 R3HDM1Q15032 1099 aaKnown RBP17.08■□□□□ 0.32
ITGA7-210ENST00000554543 RAPGEF4Q8WZA2 1011 aa17.08■□□□□ 0.32
ITGA7-210ENST00000554543 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.32
ITGA7-210ENST00000554543 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
ITGA7-210ENST00000554543 ZCRB1Q8TBF4 217 aaKnown RBP17.07■□□□□ 0.32
ITGA7-210ENST00000554543 ITGB4P16144 1822 aa17.06■□□□□ 0.32
ITGA7-210ENST00000554543 TATP17735 454 aaPredicted RBP17.06■□□□□ 0.32
ITGA7-210ENST00000554543 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
ITGA7-210ENST00000554543 SRCAPQ6ZRS2 3230 aa17.06■□□□□ 0.32
ITGA7-210ENST00000554543 KCNQ4P56696 695 aa17.05■□□□□ 0.32
ITGA7-210ENST00000554543 BCL11BQ9C0K0 894 aaPredicted RBP17.05■□□□□ 0.32
ITGA7-210ENST00000554543 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
ITGA7-210ENST00000554543 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
ITGA7-210ENST00000554543 MTHFSP49914 203 aa17.03■□□□□ 0.32
ITGA7-210ENST00000554543 RGPD3A6NKT7 1758 aaPredicted RBP17.02■□□□□ 0.32
ITGA7-210ENST00000554543 RGPD4Q7Z3J3 1758 aa17.02■□□□□ 0.32
ITGA7-210ENST00000554543 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.32
ITGA7-210ENST00000554543 CYP27B1O15528 508 aa17.01■□□□□ 0.31
ITGA7-210ENST00000554543 PROM2Q8N271 834 aa17.01■□□□□ 0.31
ITGA7-210ENST00000554543 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
ITGA7-210ENST00000554543 HMOX1P09601 288 aa17■□□□□ 0.31
ITGA7-210ENST00000554543 NCAPD2Q15021 1401 aa17■□□□□ 0.31
ITGA7-210ENST00000554543 SULT6B1Q6IMI4 303 aa16.99■□□□□ 0.31
ITGA7-210ENST00000554543 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
ITGA7-210ENST00000554543 TUBGCP6Q96RT7 1819 aa16.98■□□□□ 0.31
ITGA7-210ENST00000554543 BCL9O00512 1426 aa16.98■□□□□ 0.31
ITGA7-210ENST00000554543 TXNRD1Q16881 649 aa16.98■□□□□ 0.31
ITGA7-210ENST00000554543 PDGFDQ9GZP0 370 aaPredicted RBP16.98■□□□□ 0.31
ITGA7-210ENST00000554543 PCDH11XQ9BZA7 1347 aa16.97■□□□□ 0.31
ITGA7-210ENST00000554543 PCDH11YQ9BZA8 1340 aa16.97■□□□□ 0.31
ITGA7-210ENST00000554543 IL13P35225 146 aa16.97■□□□□ 0.31
ITGA7-210ENST00000554543 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
ITGA7-210ENST00000554543 LY75O60449 1722 aa16.96■□□□□ 0.31
ITGA7-210ENST00000554543 MPRIPQ6WCQ1 1025 aa16.96■□□□□ 0.31
ITGA7-210ENST00000554543 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
ITGA7-210ENST00000554543 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
ITGA7-210ENST00000554543 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
ITGA7-210ENST00000554543 PLSCR1O15162 318 aa16.94■□□□□ 0.3
ITGA7-210ENST00000554543 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
ITGA7-210ENST00000554543 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
ITGA7-210ENST00000554543 PAPPAQ13219 1627 aa16.93■□□□□ 0.3
ITGA7-210ENST00000554543 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
ITGA7-210ENST00000554543 PHKG2P15735 406 aa16.92■□□□□ 0.3
ITGA7-210ENST00000554543 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
ITGA7-210ENST00000554543 ZNF530Q6P9A1 599 aaPredicted RBP16.92■□□□□ 0.3
ITGA7-210ENST00000554543 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
ITGA7-210ENST00000554543 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
ITGA7-210ENST00000554543 NBPF14Q5TI25 921 aa16.91■□□□□ 0.3
ITGA7-210ENST00000554543 TAF1LQ8IZX4 1826 aa16.91■□□□□ 0.3
ITGA7-210ENST00000554543 C5P01031 1676 aa16.91■□□□□ 0.3
ITGA7-210ENST00000554543 NPC1L1Q9UHC9 1359 aa16.9■□□□□ 0.3
ITGA7-210ENST00000554543 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
ITGA7-210ENST00000554543 SMIM5Q71RC9 77 aa16.89■□□□□ 0.29
ITGA7-210ENST00000554543 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.29
ITGA7-210ENST00000554543 ZBTB7AO95365 584 aa16.88■□□□□ 0.29
ITGA7-210ENST00000554543 IFNL2Q8IZJ0 200 aa16.88■□□□□ 0.29
ITGA7-210ENST00000554543 PIGBQ92521 554 aa16.88■□□□□ 0.29
ITGA7-210ENST00000554543 STK32BQ9NY57 414 aa16.88■□□□□ 0.29
ITGA7-210ENST00000554543 LRP5O75197 1615 aa16.88■□□□□ 0.29
ITGA7-210ENST00000554543 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
ITGA7-210ENST00000554543 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
ITGA7-210ENST00000554543 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
ITGA7-210ENST00000554543 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
ITGA7-210ENST00000554543 KDRP35968 1356 aa16.86■□□□□ 0.29
ITGA7-210ENST00000554543 SLC15A2Q16348 729 aa16.85■□□□□ 0.29
ITGA7-210ENST00000554543 TMOD3Q9NYL9 352 aa16.85■□□□□ 0.29
ITGA7-210ENST00000554543 ATF5Q9Y2D1 282 aaPredicted RBP16.85■□□□□ 0.29
ITGA7-210ENST00000554543 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
ITGA7-210ENST00000554543 C1orf141Q5JVX7 400 aa16.84■□□□□ 0.29
ITGA7-210ENST00000554543 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
ITGA7-210ENST00000554543 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
ITGA7-210ENST00000554543 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
ITGA7-210ENST00000554543 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
ITGA7-210ENST00000554543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.82■□□□□ 0.28
ITGA7-210ENST00000554543 MSH5O43196 834 aa16.81■□□□□ 0.28
ITGA7-210ENST00000554543 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
ITGA7-210ENST00000554543 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
ITGA7-210ENST00000554543 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
ITGA7-210ENST00000554543 DLG5Q8TDM6 1919 aa16.8■□□□□ 0.28
ITGA7-210ENST00000554543 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
ITGA7-210ENST00000554543 CABP4P57796 275 aa16.8■□□□□ 0.28
ITGA7-210ENST00000554543 AMOTQ4VCS5 1084 aa16.8■□□□□ 0.28
ITGA7-210ENST00000554543 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
ITGA7-210ENST00000554543 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
ITGA7-210ENST00000554543 PHACTR3Q96KR7 559 aa16.8■□□□□ 0.28
ITGA7-210ENST00000554543 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
ITGA7-210ENST00000554543 ATG3Q9NT62 314 aa16.8■□□□□ 0.28
ITGA7-210ENST00000554543 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
ITGA7-210ENST00000554543 TFCP2L1Q9NZI6 479 aa16.79■□□□□ 0.28
ITGA7-210ENST00000554543 UBR3Q6ZT12 1888 aa16.79■□□□□ 0.28
ITGA7-210ENST00000554543 PNPLA7Q6ZV29 1317 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
ITGA7-210ENST00000554543 PHF14O94880 888 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 ITPK1Q13572 414 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 SLC27A3Q5K4L6 730 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms