RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 COL23A1Q86Y22 540 aaPredicted RBP9.51□□□□□ -0.89
PCNX4-208ENST00000554534 ABCC6O95255 1503 aa9.51□□□□□ -0.89
PCNX4-208ENST00000554534 HOXC9P31274 260 aa9.5□□□□□ -0.89
PCNX4-208ENST00000554534 NBPF6Q5VWK0 638 aa9.5□□□□□ -0.89
PCNX4-208ENST00000554534 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
PCNX4-208ENST00000554534 ZNF526Q8TF50 670 aaPredicted RBP9.5□□□□□ -0.89
PCNX4-208ENST00000554534 NBPF4Q96M43 638 aa9.5□□□□□ -0.89
PCNX4-208ENST00000554534 GGNBP2Q9H3C7 697 aa9.5□□□□□ -0.89
PCNX4-208ENST00000554534 CCNL1Q9UK58 526 aaPredicted RBP9.5□□□□□ -0.89
PCNX4-208ENST00000554534 DOT1LQ8TEK3 1739 aa9.5□□□□□ -0.89
PCNX4-208ENST00000554534 MAP3K19Q56UN5 1328 aa9.5□□□□□ -0.89
PCNX4-208ENST00000554534 ST20-MTHFSA0A0A6YYL1 179 aa9.49□□□□□ -0.89
PCNX4-208ENST00000554534 MEGF6O75095 1541 aa9.48□□□□□ -0.89
PCNX4-208ENST00000554534 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
PCNX4-208ENST00000554534 MPRIPQ6WCQ1 1025 aa9.48□□□□□ -0.89
PCNX4-208ENST00000554534 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
PCNX4-208ENST00000554534 COG3Q96JB2 828 aa9.48□□□□□ -0.89
PCNX4-208ENST00000554534 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
PCNX4-208ENST00000554534 NSD2O96028 1365 aa9.48□□□□□ -0.89
PCNX4-208ENST00000554534 SHANK3Q9BYB0 1731 aa9.48□□□□□ -0.89
PCNX4-208ENST00000554534 CEP350Q5VT06 3117 aa9.47□□□□□ -0.89
PCNX4-208ENST00000554534 EDC4Q6P2E9 1401 aaKnown RBP9.47□□□□□ -0.89
PCNX4-208ENST00000554534 PHF14O94880 888 aa9.46□□□□□ -0.9
PCNX4-208ENST00000554534 HSP90AB2PQ58FF8 381 aa9.46□□□□□ -0.9
PCNX4-208ENST00000554534 SLC27A3Q5K4L6 730 aa9.46□□□□□ -0.9
PCNX4-208ENST00000554534 SLC16A10Q8TF71 515 aa9.46□□□□□ -0.9
PCNX4-208ENST00000554534 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.9
PCNX4-208ENST00000554534 USP54Q70EL1 1684 aa9.45□□□□□ -0.9
PCNX4-208ENST00000554534 FAM208AQ9UK61 1670 aaKnown RBP9.45□□□□□ -0.9
PCNX4-208ENST00000554534 LY75O60449 1722 aa9.45□□□□□ -0.9
PCNX4-208ENST00000554534 TESK2Q96S53 571 aa9.45□□□□□ -0.9
PCNX4-208ENST00000554534 FYB1O15117 783 aa9.44□□□□□ -0.9
PCNX4-208ENST00000554534 PPM1GO15355 546 aaPredicted RBP9.44□□□□□ -0.9
PCNX4-208ENST00000554534 USP47Q96K76 1375 aa9.44□□□□□ -0.9
PCNX4-208ENST00000554534 MAP3K5Q99683 1374 aa9.44□□□□□ -0.9
PCNX4-208ENST00000554534 QSER1Q2KHR3 1735 aa9.43□□□□□ -0.9
PCNX4-208ENST00000554534 CYP27B1O15528 508 aa9.43□□□□□ -0.9
PCNX4-208ENST00000554534 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
PCNX4-208ENST00000554534 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
PCNX4-208ENST00000554534 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
PCNX4-208ENST00000554534 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
PCNX4-208ENST00000554534 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
PCNX4-208ENST00000554534 EMILIN1Q9Y6C2 1016 aa9.42□□□□□ -0.9
PCNX4-208ENST00000554534 ITGB4P16144 1822 aa9.41□□□□□ -0.9
PCNX4-208ENST00000554534 PIGBQ92521 554 aa9.41□□□□□ -0.9
PCNX4-208ENST00000554534 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
PCNX4-208ENST00000554534 C5P01031 1676 aa9.41□□□□□ -0.9
PCNX4-208ENST00000554534 TAF1LQ8IZX4 1826 aa9.4□□□□□ -0.9
PCNX4-208ENST00000554534 PALLDQ8WX93 1383 aa9.4□□□□□ -0.9
PCNX4-208ENST00000554534 GRIN3BO60391 1043 aa9.4□□□□□ -0.9
PCNX4-208ENST00000554534 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
PCNX4-208ENST00000554534 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.9
PCNX4-208ENST00000554534 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
PCNX4-208ENST00000554534 TOGARAM1Q9Y4F4 1720 aa9.39□□□□□ -0.91
PCNX4-208ENST00000554534 IGSF1Q8N6C5 1336 aa9.39□□□□□ -0.91
PCNX4-208ENST00000554534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.39□□□□□ -0.91
PCNX4-208ENST00000554534 AK7Q96M32 723 aa9.39□□□□□ -0.91
PCNX4-208ENST00000554534 GPBP1L1Q9HC44 474 aaPredicted RBP9.39□□□□□ -0.91
PCNX4-208ENST00000554534 ASAP1Q9ULH1 1129 aa9.39□□□□□ -0.91
PCNX4-208ENST00000554534 ITPK1Q13572 414 aa9.38□□□□□ -0.91
PCNX4-208ENST00000554534 IFFO2Q5TF58 517 aa9.38□□□□□ -0.91
PCNX4-208ENST00000554534 C4BP0C0L5 1744 aa9.37□□□□□ -0.91
PCNX4-208ENST00000554534 A0A0G2JLW4 131 aa9.37□□□□□ -0.91
PCNX4-208ENST00000554534 CD2APQ9Y5K6 639 aa9.37□□□□□ -0.91
PCNX4-208ENST00000554534 UBR3Q6ZT12 1888 aa9.36□□□□□ -0.91
PCNX4-208ENST00000554534 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
PCNX4-208ENST00000554534 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
PCNX4-208ENST00000554534 KIF20BQ96Q89 1820 aa9.36□□□□□ -0.91
PCNX4-208ENST00000554534 GNPATO15228 680 aa9.36□□□□□ -0.91
PCNX4-208ENST00000554534 ATP6V1AP38606 617 aa9.36□□□□□ -0.91
PCNX4-208ENST00000554534 TMF1P82094 1093 aa9.36□□□□□ -0.91
PCNX4-208ENST00000554534 PUS7Q96PZ0 661 aaKnown RBP9.36□□□□□ -0.91
PCNX4-208ENST00000554534 EYA1Q99502 592 aa9.36□□□□□ -0.91
PCNX4-208ENST00000554534 N4BP2Q86UW6 1770 aaPredicted RBP9.36□□□□□ -0.91
PCNX4-208ENST00000554534 LOC102724428A0A0B4J2F2 783 aa9.35□□□□□ -0.91
PCNX4-208ENST00000554534 SIK1P57059 783 aa9.35□□□□□ -0.91
PCNX4-208ENST00000554534 HTRA3P83110 453 aa9.35□□□□□ -0.91
PCNX4-208ENST00000554534 SLC4A9Q96Q91 983 aa9.35□□□□□ -0.91
PCNX4-208ENST00000554534 RBM42Q9BTD8 480 aaKnown RBP9.35□□□□□ -0.91
PCNX4-208ENST00000554534 MAP2P11137 1827 aaKnown RBP9.35□□□□□ -0.91
PCNX4-208ENST00000554534 INSRP06213 1382 aa9.35□□□□□ -0.91
PCNX4-208ENST00000554534 SMG6Q86US8 1419 aaKnown RBP9.34□□□□□ -0.91
PCNX4-208ENST00000554534 MMP10P09238 476 aa9.34□□□□□ -0.91
PCNX4-208ENST00000554534 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
PCNX4-208ENST00000554534 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
PCNX4-208ENST00000554534 SMARCC1Q92922 1105 aaPredicted RBP9.34□□□□□ -0.91
PCNX4-208ENST00000554534 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
PCNX4-208ENST00000554534 TMOD3Q9NYL9 352 aa9.34□□□□□ -0.91
PCNX4-208ENST00000554534 BCS1LQ9Y276 419 aa9.34□□□□□ -0.91
PCNX4-208ENST00000554534 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
PCNX4-208ENST00000554534 KIF3CO14782 793 aa9.33□□□□□ -0.92
PCNX4-208ENST00000554534 HSPA6P17066 643 aa9.33□□□□□ -0.92
PCNX4-208ENST00000554534 SPG7Q9UQ90 795 aa9.33□□□□□ -0.92
PCNX4-208ENST00000554534 RTL1A6NKG5 1358 aa9.33□□□□□ -0.92
PCNX4-208ENST00000554534 FLT4P35916 1363 aa9.33□□□□□ -0.92
PCNX4-208ENST00000554534 CGNL1Q0VF96 1302 aa9.32□□□□□ -0.92
PCNX4-208ENST00000554534 PHKG2P15735 406 aa9.32□□□□□ -0.92
PCNX4-208ENST00000554534 DPEP1P16444 411 aa9.32□□□□□ -0.92
PCNX4-208ENST00000554534 NMRK2Q9NPI5 230 aa9.32□□□□□ -0.92
PCNX4-208ENST00000554534 POLKQ9UBT6 870 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms