RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 NSD2O96028 1365 aa11.98□□□□□ -0.49
ACTN1-213ENST00000554508 TATP17735 454 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-213ENST00000554508 PROM2Q8N271 834 aa11.98□□□□□ -0.49
ACTN1-213ENST00000554508 SRCAPQ6ZRS2 3230 aa11.98□□□□□ -0.49
ACTN1-213ENST00000554508 PPM1GO15355 546 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-213ENST00000554508 TXNRD1Q16881 649 aa11.97□□□□□ -0.49
ACTN1-213ENST00000554508 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
ACTN1-213ENST00000554508 POLKQ9UBT6 870 aa11.97□□□□□ -0.49
ACTN1-213ENST00000554508 MEGF6O75095 1541 aa11.96□□□□□ -0.49
ACTN1-213ENST00000554508 KNSTRNQ9Y448 316 aa11.96□□□□□ -0.49
ACTN1-213ENST00000554508 KIF7Q2M1P5 1343 aa11.94□□□□□ -0.5
ACTN1-213ENST00000554508 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-213ENST00000554508 MORC1Q86VD1 984 aa11.94□□□□□ -0.5
ACTN1-213ENST00000554508 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
ACTN1-213ENST00000554508 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
ACTN1-213ENST00000554508 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
ACTN1-213ENST00000554508 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
ACTN1-213ENST00000554508 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
ACTN1-213ENST00000554508 EYA1Q99502 592 aa11.93□□□□□ -0.5
ACTN1-213ENST00000554508 STK32BQ9NY57 414 aa11.93□□□□□ -0.5
ACTN1-213ENST00000554508 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
ACTN1-213ENST00000554508 SLC15A2Q16348 729 aa11.92□□□□□ -0.5
ACTN1-213ENST00000554508 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
ACTN1-213ENST00000554508 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-213ENST00000554508 ANO8Q9HCE9 1232 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-213ENST00000554508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.92□□□□□ -0.57e-7■■■□□ 15.2
ACTN1-213ENST00000554508 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
ACTN1-213ENST00000554508 SPON1Q9HCB6 807 aa11.91□□□□□ -0.5
ACTN1-213ENST00000554508 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
ACTN1-213ENST00000554508 LY75O60449 1722 aa11.91□□□□□ -0.5
ACTN1-213ENST00000554508 ITGB4P16144 1822 aa11.9□□□□□ -0.5
ACTN1-213ENST00000554508 CASZ1Q86V15 1759 aa11.9□□□□□ -0.5
ACTN1-213ENST00000554508 CYP27B1O15528 508 aa11.9□□□□□ -0.5
ACTN1-213ENST00000554508 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-213ENST00000554508 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
ACTN1-213ENST00000554508 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-213ENST00000554508 HMGB2P26583 209 aaKnown RBP11.89□□□□□ -0.51
ACTN1-213ENST00000554508 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
ACTN1-213ENST00000554508 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-213ENST00000554508 LRRC4BQ9NT99 713 aa11.88□□□□□ -0.51
ACTN1-213ENST00000554508 QSER1Q2KHR3 1735 aa11.88□□□□□ -0.51
ACTN1-213ENST00000554508 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
ACTN1-213ENST00000554508 IFNL2Q8IZJ0 200 aa11.87□□□□□ -0.51
ACTN1-213ENST00000554508 MPRIPQ6WCQ1 1025 aa11.86□□□□□ -0.51
ACTN1-213ENST00000554508 PPP1R1BQ9UD71 204 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-213ENST00000554508 TOGARAM1Q9Y4F4 1720 aa11.86□□□□□ -0.51
ACTN1-213ENST00000554508 NPC1L1Q9UHC9 1359 aa11.85□□□□□ -0.51
ACTN1-213ENST00000554508 PHKG2P15735 406 aa11.85□□□□□ -0.51
ACTN1-213ENST00000554508 PLEKHO1Q53GL0 409 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-213ENST00000554508 SMARCC1Q92922 1105 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-213ENST00000554508 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
ACTN1-213ENST00000554508 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-213ENST00000554508 CCNL1Q9UK58 526 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-213ENST00000554508 TAF1LQ8IZX4 1826 aa11.84□□□□□ -0.51
ACTN1-213ENST00000554508 ZBTB7AO95365 584 aa11.84□□□□□ -0.51
ACTN1-213ENST00000554508 ZNF827Q17R98 1081 aa11.84□□□□□ -0.51
ACTN1-213ENST00000554508 AMOTQ4VCS5 1084 aa11.84□□□□□ -0.51
ACTN1-213ENST00000554508 SLC16A10Q8TF71 515 aa11.84□□□□□ -0.51
ACTN1-213ENST00000554508 MTFR1LQ9H019 292 aa11.84□□□□□ -0.51
ACTN1-213ENST00000554508 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.51
ACTN1-213ENST00000554508 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
ACTN1-213ENST00000554508 IL13P35225 146 aa11.83□□□□□ -0.52
ACTN1-213ENST00000554508 MTHFSP49914 203 aa11.83□□□□□ -0.52
ACTN1-213ENST00000554508 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.52
ACTN1-213ENST00000554508 PIGBQ92521 554 aa11.83□□□□□ -0.52
ACTN1-213ENST00000554508 C5P01031 1676 aa11.82□□□□□ -0.52
ACTN1-213ENST00000554508 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-213ENST00000554508 PTGER2P43116 358 aa11.82□□□□□ -0.52
ACTN1-213ENST00000554508 SULT6B1Q6IMI4 303 aa11.82□□□□□ -0.52
ACTN1-213ENST00000554508 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
ACTN1-213ENST00000554508 TFCP2L1Q9NZI6 479 aa11.82□□□□□ -0.52
ACTN1-213ENST00000554508 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-213ENST00000554508 KDRP35968 1356 aa11.81□□□□□ -0.52
ACTN1-213ENST00000554508 PALLDQ8WX93 1383 aa11.81□□□□□ -0.52
ACTN1-213ENST00000554508 ERVV-2B6SEH9 535 aa11.81□□□□□ -0.52
ACTN1-213ENST00000554508 KCNQ4P56696 695 aa11.81□□□□□ -0.52
ACTN1-213ENST00000554508 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
ACTN1-213ENST00000554508 AEBP1Q8IUX7 1158 aa11.8□□□□□ -0.52
ACTN1-213ENST00000554508 PNPLA7Q6ZV29 1317 aa11.8□□□□□ -0.52
ACTN1-213ENST00000554508 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
ACTN1-213ENST00000554508 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
ACTN1-213ENST00000554508 C1orf141Q5JVX7 400 aa11.79□□□□□ -0.52
ACTN1-213ENST00000554508 ZNF530Q6P9A1 599 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-213ENST00000554508 FLAD1Q8NFF5 587 aa11.79□□□□□ -0.52
ACTN1-213ENST00000554508 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
ACTN1-213ENST00000554508 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
ACTN1-213ENST00000554508 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
ACTN1-213ENST00000554508 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.52
ACTN1-213ENST00000554508 LOC102724428A0A0B4J2F2 783 aa11.77□□□□□ -0.53
ACTN1-213ENST00000554508 SIK1P57059 783 aa11.77□□□□□ -0.53
ACTN1-213ENST00000554508 ARXQ96QS3 562 aa11.77□□□□□ -0.53
ACTN1-213ENST00000554508 ASAP1Q9ULH1 1129 aa11.77□□□□□ -0.53
ACTN1-213ENST00000554508 C4BP0C0L5 1744 aa11.77□□□□□ -0.53
ACTN1-213ENST00000554508 UBR3Q6ZT12 1888 aa11.76□□□□□ -0.53
ACTN1-213ENST00000554508 ZNF831Q5JPB2 1677 aa11.76□□□□□ -0.53
ACTN1-213ENST00000554508 POLD1P28340 1107 aa11.76□□□□□ -0.53
ACTN1-213ENST00000554508 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
ACTN1-213ENST00000554508 CABP4P57796 275 aa11.76□□□□□ -0.53
ACTN1-213ENST00000554508 CNGB1Q14028 1251 aaPredicted RBP11.76□□□□□ -0.53
ACTN1-213ENST00000554508 AKAP4Q5JQC9 854 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms