RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 KDM4CQ9H3R0 1056 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 DIAPH3Q9NSV4 1193 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 SPTLC3Q9NUV7 552 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 POLKQ9UBT6 870 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 YEATS2Q9ULM3 1422 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 MAST1Q9Y2H9 1570 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 EIF3JO75822 258 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 INHBEP58166 350 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 JAKMIP3Q5VZ66 844 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 PIBF1Q8WXW3 757 aa10.34□□□□□ -0.75
HNRNPC-211ENST00000554455 ERCC3P19447 782 aa10.33□□□□□ -0.76
HNRNPC-211ENST00000554455 CDC37Q16543 378 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-211ENST00000554455 CIZ1Q9ULV3 898 aaPredicted RBP10.33□□□□□ -0.76
HNRNPC-211ENST00000554455 MYBBP1AQ9BQG0 1328 aaKnown RBP10.33□□□□□ -0.76
HNRNPC-211ENST00000554455 TRPM1Q7Z4N2 1603 aa10.33□□□□□ -0.76
HNRNPC-211ENST00000554455 MYO1CO00159 1063 aa10.32□□□□□ -0.76
HNRNPC-211ENST00000554455 C21orf2O43822 256 aa10.32□□□□□ -0.76
HNRNPC-211ENST00000554455 KDM4AO75164 1064 aa10.32□□□□□ -0.76
HNRNPC-211ENST00000554455 RABEP1Q15276 862 aa10.32□□□□□ -0.76
HNRNPC-211ENST00000554455 MCTP2Q6DN12 878 aa10.32□□□□□ -0.76
HNRNPC-211ENST00000554455 OSCARQ8IYS5 282 aa10.32□□□□□ -0.76
HNRNPC-211ENST00000554455 UNC13BO14795 1591 aa10.32□□□□□ -0.76
HNRNPC-211ENST00000554455 NUP155O75694 1391 aa10.32□□□□□ -0.76
HNRNPC-211ENST00000554455 CT47B1P0C2W7 299 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 CCT2P78371 535 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 TXLNBQ8N3L3 684 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 CCDC97Q96F63 343 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 PREX2Q70Z35 1606 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 ATP10BO94823 1461 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 PLEKHG2Q9H7P9 1386 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 POLD1P28340 1107 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 MAGEA8P43361 318 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 NOLC1Q14978 699 aaKnown RBP eCLIP10.31□□□□□ -0.761e-8■■■□□ 17.6
HNRNPC-211ENST00000554455 PPP2R5AQ15172 486 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 NOM1Q5C9Z4 860 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 KDM2AQ9Y2K7 1162 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 CCDC141Q6ZP82 1450 aa10.31□□□□□ -0.76
HNRNPC-211ENST00000554455 GPRASP1Q5JY77 1395 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 EIF2AK4Q9P2K8 1649 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 GOLGA6CA6NDK9 693 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 GOLGA6BA6NDN3 693 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 GOLGA6DP0CG33 693 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 DDIT3P35638 169 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 MAP2K2P36507 400 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 KLHL23Q8NBE8 558 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 ANKRD20A12PQ8NF67 263 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 KIF18AQ8NI77 898 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 NECTIN2Q92692 538 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 GBP4Q96PP9 640 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 ZNF446Q9NWS9 450 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 ETAA1Q9NY74 926 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 GOLGA6AQ9NYA3 693 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 CWC15Q9P013 229 aaKnown RBP10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 FAM135AQ9P2D6 1515 aa10.3□□□□□ -0.76
HNRNPC-211ENST00000554455 TTC31Q49AM3 519 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 CLEC17AQ6ZS10 378 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 NLRP13Q86W25 1043 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.29□□□□□ -0.762e-26■■□□□ 11.8
HNRNPC-211ENST00000554455 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 CARD11Q9BXL7 1154 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 PARD3Q8TEW0 1356 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 SAMD9LQ8IVG5 1584 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 CPP00450 1065 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 ADCY2Q08462 1091 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 PDE3BQ13370 1112 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 IQUBQ8NA54 791 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 TATDN2Q93075 761 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 TBC1D2Q9BYX2 928 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 CEP126Q9P2H0 1117 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 IL16Q14005 1332 aa10.29□□□□□ -0.76
HNRNPC-211ENST00000554455 PRAG1Q86YV5 1406 aa10.28□□□□□ -0.76
HNRNPC-211ENST00000554455 PLXNC1O60486 1568 aa10.28□□□□□ -0.76
HNRNPC-211ENST00000554455 KLHL40Q2TBA0 621 aa10.28□□□□□ -0.76
HNRNPC-211ENST00000554455 CHMP7Q8WUX9 453 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-211ENST00000554455 KIF1BPQ96EK5 621 aa10.28□□□□□ -0.76
HNRNPC-211ENST00000554455 RANBP17Q9H2T7 1088 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-211ENST00000554455 COL17A1Q9UMD9 1497 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-211ENST00000554455 PRDM15P57071 1507 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-211ENST00000554455 TSPY4P0CV99 314 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 TSPY10P0CW01 314 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 SETSIPP0DME0 302 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 SRLQ86TD4 932 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 NFATC2IPQ8NCF5 419 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 SNRNP27Q8WVK2 155 aaKnown RBP10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 JPH4Q96JJ6 628 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 PLEKHH2Q8IVE3 1493 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 IQGAP3Q86VI3 1631 aa10.27□□□□□ -0.77
HNRNPC-211ENST00000554455 ERICH4A6NGS2 130 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 CCP110O43303 1012 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 ABCD1P33897 745 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 MAGEA9P43362 315 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 NCBP1Q09161 790 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 TRAF1Q13077 416 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 SLFNL1Q499Z3 407 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 MORC1Q86VD1 984 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 STAG1Q8WVM7 1258 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 DRC1Q96MC2 740 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms