RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
PPP4R3A-201ENST00000554308 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
PPP4R3A-201ENST00000554308 PCDHB15Q9Y5E8 787 aa18.57■□□□□ 0.56
PPP4R3A-201ENST00000554308 KRT24Q2M2I5 525 aa18.57■□□□□ 0.56
PPP4R3A-201ENST00000554308 RTF1Q92541 710 aaKnown RBP18.57■□□□□ 0.56
PPP4R3A-201ENST00000554308 ALDH1L2Q3SY69 923 aa18.56■□□□□ 0.56
PPP4R3A-201ENST00000554308 IPO8O15397 1037 aaKnown RBP18.55■□□□□ 0.56
PPP4R3A-201ENST00000554308 GCP02774 474 aa18.55■□□□□ 0.56
PPP4R3A-201ENST00000554308 DLG5Q8TDM6 1919 aa18.55■□□□□ 0.56
PPP4R3A-201ENST00000554308 KDM4FA0A1W2PPD8 638 aa18.55■□□□□ 0.56
PPP4R3A-201ENST00000554308 KCNH5Q8NCM2 988 aa18.55■□□□□ 0.56
PPP4R3A-201ENST00000554308 KIF16BQ96L93 1317 aa18.55■□□□□ 0.56
PPP4R3A-201ENST00000554308 TMEM57Q8N5G2 664 aa18.54■□□□□ 0.56
PPP4R3A-201ENST00000554308 IP6K1Q92551 441 aa18.54■□□□□ 0.56
PPP4R3A-201ENST00000554308 KDRP35968 1356 aa18.54■□□□□ 0.56
PPP4R3A-201ENST00000554308 ZNF428Q96B54 188 aa18.53■□□□□ 0.56
PPP4R3A-201ENST00000554308 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
PPP4R3A-201ENST00000554308 CHL1O00533 1208 aa18.52■□□□□ 0.56
PPP4R3A-201ENST00000554308 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.56
PPP4R3A-201ENST00000554308 NBPF4Q96M43 638 aa18.52■□□□□ 0.56
PPP4R3A-201ENST00000554308 GAS2L2Q8NHY3 880 aa18.52■□□□□ 0.55
PPP4R3A-201ENST00000554308 LRRC59Q96AG4 307 aaKnown RBP18.52■□□□□ 0.55
PPP4R3A-201ENST00000554308 SLKQ9H2G2 1235 aaPredicted RBP18.52■□□□□ 0.55
PPP4R3A-201ENST00000554308 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
PPP4R3A-201ENST00000554308 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
PPP4R3A-201ENST00000554308 MRPL50Q8N5N7 158 aaKnown RBP18.51■□□□□ 0.55
PPP4R3A-201ENST00000554308 NWD1Q149M9 1564 aa18.51■□□□□ 0.55
PPP4R3A-201ENST00000554308 MARF1Q9Y4F3 1742 aaKnown RBP18.5■□□□□ 0.55
PPP4R3A-201ENST00000554308 DDX19BQ9UMR2 479 aa18.5■□□□□ 0.55
PPP4R3A-201ENST00000554308 ZC3H6P61129 1189 aaKnown RBP18.5■□□□□ 0.55
PPP4R3A-201ENST00000554308 TSPYL4Q9UJ04 414 aa18.49■□□□□ 0.55
PPP4R3A-201ENST00000554308 AAMPQ13685 434 aa18.49■□□□□ 0.55
PPP4R3A-201ENST00000554308 GNAT3A8MTJ3 354 aa18.48■□□□□ 0.55
PPP4R3A-201ENST00000554308 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
PPP4R3A-201ENST00000554308 CADPS2Q86UW7 1296 aa18.47■□□□□ 0.55
PPP4R3A-201ENST00000554308 AXIN2Q9Y2T1 843 aa18.47■□□□□ 0.55
PPP4R3A-201ENST00000554308 RWDD1Q9H446 243 aaPredicted RBP18.47■□□□□ 0.55
PPP4R3A-201ENST00000554308 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
PPP4R3A-201ENST00000554308 BRPF1P55201 1214 aaPredicted RBP18.46■□□□□ 0.55
PPP4R3A-201ENST00000554308 VIRMAQ69YN4 1812 aaKnown RBP18.46■□□□□ 0.55
PPP4R3A-201ENST00000554308 CRB1P82279 1406 aa18.46■□□□□ 0.55
PPP4R3A-201ENST00000554308 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
PPP4R3A-201ENST00000554308 NFAT5O94916 1531 aa18.45■□□□□ 0.54
PPP4R3A-201ENST00000554308 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
PPP4R3A-201ENST00000554308 MST1RQ04912 1400 aa18.44■□□□□ 0.54
PPP4R3A-201ENST00000554308 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
PPP4R3A-201ENST00000554308 ANKRD24Q8TF21 1146 aa18.44■□□□□ 0.54
PPP4R3A-201ENST00000554308 STRCP1A6NGW2 1772 aa18.43■□□□□ 0.54
PPP4R3A-201ENST00000554308 LTN1O94822 1766 aa18.43■□□□□ 0.54
PPP4R3A-201ENST00000554308 ARHGAP45Q92619 1136 aa18.43■□□□□ 0.54
PPP4R3A-201ENST00000554308 MSH6P52701 1360 aa18.42■□□□□ 0.54
PPP4R3A-201ENST00000554308 EIF5BO60841 1220 aaKnown RBP18.42■□□□□ 0.54
PPP4R3A-201ENST00000554308 ZNF335Q9H4Z2 1342 aaPredicted RBP18.42■□□□□ 0.54
PPP4R3A-201ENST00000554308 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
PPP4R3A-201ENST00000554308 C1orf115Q9H7X2 142 aa18.42■□□□□ 0.54
PPP4R3A-201ENST00000554308 NECTIN2Q92692 538 aa18.41■□□□□ 0.54
PPP4R3A-201ENST00000554308 MAP3K5Q99683 1374 aa18.41■□□□□ 0.54
PPP4R3A-201ENST00000554308 HTATSF1O43719 755 aaKnown RBP18.41■□□□□ 0.54
PPP4R3A-201ENST00000554308 BECN1Q14457 450 aa18.41■□□□□ 0.54
PPP4R3A-201ENST00000554308 SPRYD3Q8NCJ5 442 aa18.41■□□□□ 0.54
PPP4R3A-201ENST00000554308 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
PPP4R3A-201ENST00000554308 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
PPP4R3A-201ENST00000554308 USP54Q70EL1 1684 aa18.4■□□□□ 0.54
PPP4R3A-201ENST00000554308 ZBTB7BO15156 539 aaPredicted RBP18.4■□□□□ 0.54
PPP4R3A-201ENST00000554308 HAP1P54257 671 aaPredicted RBP18.4■□□□□ 0.54
PPP4R3A-201ENST00000554308 NPHP3Q7Z494 1330 aa18.4■□□□□ 0.54
PPP4R3A-201ENST00000554308 ARXQ96QS3 562 aa18.4■□□□□ 0.54
PPP4R3A-201ENST00000554308 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
PPP4R3A-201ENST00000554308 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.54
PPP4R3A-201ENST00000554308 API5Q9BZZ5 524 aaKnown RBP18.39■□□□□ 0.53
PPP4R3A-201ENST00000554308 KIAA0232Q92628 1395 aa18.39■□□□□ 0.53
PPP4R3A-201ENST00000554308 TBC1D2Q9BYX2 928 aa18.39■□□□□ 0.53
PPP4R3A-201ENST00000554308 TAF7Q15545 349 aaPredicted RBP18.38■□□□□ 0.53
PPP4R3A-201ENST00000554308 CHRNA2Q15822 529 aa18.38■□□□□ 0.53
PPP4R3A-201ENST00000554308 ZNF530Q6P9A1 599 aaPredicted RBP18.38■□□□□ 0.53
PPP4R3A-201ENST00000554308 FAM43AQ8N2R8 423 aa18.38■□□□□ 0.53
PPP4R3A-201ENST00000554308 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
PPP4R3A-201ENST00000554308 TBC1D32Q96NH3 1257 aa18.37■□□□□ 0.53
PPP4R3A-201ENST00000554308 ABCC4O15439 1325 aa18.37■□□□□ 0.53
PPP4R3A-201ENST00000554308 DCCP43146 1447 aa18.36■□□□□ 0.53
PPP4R3A-201ENST00000554308 NCOA3Q9Y6Q9 1424 aa18.36■□□□□ 0.53
PPP4R3A-201ENST00000554308 HDAC1Q13547 482 aaPredicted RBP18.35■□□□□ 0.53
PPP4R3A-201ENST00000554308 PLEKHO1Q53GL0 409 aaPredicted RBP18.35■□□□□ 0.53
PPP4R3A-201ENST00000554308 BRINP3Q76B58 766 aa18.35■□□□□ 0.53
PPP4R3A-201ENST00000554308 NLRP2Q9NX02 1062 aa18.35■□□□□ 0.53
PPP4R3A-201ENST00000554308 G2E3Q7L622 706 aa18.35■□□□□ 0.53
PPP4R3A-201ENST00000554308 SLAIN2Q9P270 581 aa18.34■□□□□ 0.53
PPP4R3A-201ENST00000554308 TRPM3Q9HCF6 1732 aaPredicted RBP18.34■□□□□ 0.53
PPP4R3A-201ENST00000554308 SLIT3O75094 1523 aa18.34■□□□□ 0.53
PPP4R3A-201ENST00000554308 ERBB3P21860 1342 aa18.34■□□□□ 0.53
PPP4R3A-201ENST00000554308 CSB-PGBD3P0DP91 1061 aa18.33■□□□□ 0.53
PPP4R3A-201ENST00000554308 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.53
PPP4R3A-201ENST00000554308 KIF1AQ12756 1690 aa18.33■□□□□ 0.53
PPP4R3A-201ENST00000554308 STK31Q9BXU1 1019 aa18.33■□□□□ 0.52
PPP4R3A-201ENST00000554308 RRAGDQ9NQL2 400 aaPredicted RBP18.33■□□□□ 0.52
PPP4R3A-201ENST00000554308 F6X3S4 739 aa18.32■□□□□ 0.52
PPP4R3A-201ENST00000554308 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
PPP4R3A-201ENST00000554308 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
PPP4R3A-201ENST00000554308 TEFQ10587 303 aa18.32■□□□□ 0.52
PPP4R3A-201ENST00000554308 AKAP4Q5JQC9 854 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms